RNA–Protein interactions for RNA: ENST00000520286.5

LSM1-202, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best)

Gene LSM1, Length 776 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-202ENST00000520286 CDC20BQ86Y33 519 aa5.47□□□□□ -1.53
LSM1-202ENST00000520286 RDH10Q8IZV5 341 aa5.47□□□□□ -1.53
LSM1-202ENST00000520286 TMEM252Q8N6L7 170 aa5.47□□□□□ -1.53
LSM1-202ENST00000520286 SPERTQ8NA61 448 aa5.47□□□□□ -1.53
LSM1-202ENST00000520286 OR7G1Q8NGA0 311 aa5.47□□□□□ -1.53
LSM1-202ENST00000520286 C1orf54Q8WWF1 131 aa5.47□□□□□ -1.53
LSM1-202ENST00000520286 TMIGD2Q96BF3 282 aa5.47□□□□□ -1.53
LSM1-202ENST00000520286 CCDC127Q96BQ5 260 aa5.47□□□□□ -1.53
LSM1-202ENST00000520286 C12orf43Q96C57 262 aaKnown RBP5.47□□□□□ -1.53
LSM1-202ENST00000520286 TMA16Q96EY4 203 aaKnown RBP5.47□□□□□ -1.53
LSM1-202ENST00000520286 NDEL1Q9GZM8 345 aa5.47□□□□□ -1.53
LSM1-202ENST00000520286 ARMC7Q9H6L4 198 aa5.47□□□□□ -1.53
LSM1-202ENST00000520286 RPF2Q9H7B2 306 aaKnown RBP5.47□□□□□ -1.53
LSM1-202ENST00000520286 TMEM185BQ9H7F4 350 aa5.47□□□□□ -1.53
LSM1-202ENST00000520286 DNAJC12Q9UKB3 198 aa5.47□□□□□ -1.53
LSM1-202ENST00000520286 MOKQ9UQ07 419 aa5.47□□□□□ -1.53
LSM1-202ENST00000520286 UGT2A1Q9Y4X1 527 aa5.47□□□□□ -1.53
LSM1-202ENST00000520286 MTCH2Q9Y6C9 303 aa5.47□□□□□ -1.53
LSM1-202ENST00000520286 CLUHO75153 1309 aa5.47□□□□□ -1.53
LSM1-202ENST00000520286 PHF3Q92576 2039 aaKnown RBP5.47□□□□□ -1.53
LSM1-202ENST00000520286 WRBO00258 174 aa5.46□□□□□ -1.54
LSM1-202ENST00000520286 KPNA4O00629 521 aaPredicted RBP5.46□□□□□ -1.54
LSM1-202ENST00000520286 HCRTR1O43613 425 aa5.46□□□□□ -1.54
LSM1-202ENST00000520286 SPOPO43791 374 aa5.46□□□□□ -1.54
LSM1-202ENST00000520286 CALUO43852 315 aaPredicted RBP5.46□□□□□ -1.54
LSM1-202ENST00000520286 KLHL2O95198 593 aa5.46□□□□□ -1.54
LSM1-202ENST00000520286 IGHV3-48P01763 117 aa5.46□□□□□ -1.54
LSM1-202ENST00000520286 KRT6AP02538 564 aa5.46□□□□□ -1.54
LSM1-202ENST00000520286 BGNP21810 368 aa5.46□□□□□ -1.54
LSM1-202ENST00000520286 BTDP43251 543 aa5.46□□□□□ -1.54
LSM1-202ENST00000520286 ACLYP53396 1101 aa5.46□□□□□ -1.54
LSM1-202ENST00000520286 GPX6P59796 221 aa5.46□□□□□ -1.54
LSM1-202ENST00000520286 ARHGAP19Q14CB8 494 aa5.46□□□□□ -1.54
LSM1-202ENST00000520286 KIAA0040Q15053 153 aa5.46□□□□□ -1.54
LSM1-202ENST00000520286 VPS26BQ4G0F5 336 aa5.46□□□□□ -1.54
LSM1-202ENST00000520286 SLC8B1Q6J4K2 584 aa5.46□□□□□ -1.54
LSM1-202ENST00000520286 ANKRD26P1Q6NSI1 321 aa5.46□□□□□ -1.54
LSM1-202ENST00000520286 LINC00299Q6ZSB3 139 aa5.46□□□□□ -1.54
LSM1-202ENST00000520286 FAM220AQ7Z4H9 259 aa5.46□□□□□ -1.54
LSM1-202ENST00000520286 FNDC5Q8NAU1 212 aa5.46□□□□□ -1.54
LSM1-202ENST00000520286 OR7G2Q8NG99 324 aa5.46□□□□□ -1.54
LSM1-202ENST00000520286 OR52I1Q8NGK6 324 aa5.46□□□□□ -1.54
LSM1-202ENST00000520286 ANGPTL6Q8NI99 470 aa5.46□□□□□ -1.54
LSM1-202ENST00000520286 MRAPQ8TCY5 172 aa5.46□□□□□ -1.54
LSM1-202ENST00000520286 BRSK1Q8TDC3 778 aa5.46□□□□□ -1.54
LSM1-202ENST00000520286 ANKRD49Q8WVL7 239 aa5.46□□□□□ -1.54
LSM1-202ENST00000520286 HIST1H4GQ99525 98 aa5.46□□□□□ -1.54
LSM1-202ENST00000520286 MTG1Q9BT17 334 aaPredicted RBP5.46□□□□□ -1.54
LSM1-202ENST00000520286 EHD1Q9H4M9 534 aa5.46□□□□□ -1.54
LSM1-202ENST00000520286 ZNF160Q9HCG1 818 aa5.46□□□□□ -1.54
LSM1-202ENST00000520286 INPP5EQ9NRR6 644 aa5.46□□□□□ -1.54
LSM1-202ENST00000520286 B4GALT7Q9UBV7 327 aa5.46□□□□□ -1.54
LSM1-202ENST00000520286 KIF25Q9UIL4 384 aa5.46□□□□□ -1.54
LSM1-202ENST00000520286 NUP50Q9UKX7 468 aa5.46□□□□□ -1.54
LSM1-202ENST00000520286 TBX21Q9UL17 535 aa5.46□□□□□ -1.54
LSM1-202ENST00000520286 PTPRFP10586 1907 aa5.46□□□□□ -1.54
LSM1-202ENST00000520286 GAKO14976 1311 aa5.46□□□□□ -1.54
LSM1-202ENST00000520286 BDP1A6H8Y1 2624 aa5.45□□□□□ -1.54
LSM1-202ENST00000520286 BAZ2BQ9UIF8 2168 aaKnown RBP5.45□□□□□ -1.54
LSM1-202ENST00000520286 LOXHD1Q8IVV2 1947 aa5.45□□□□□ -1.54
LSM1-202ENST00000520286 IGHV3OR16-13A0A075B7E8 117 aa5.45□□□□□ -1.54
LSM1-202ENST00000520286 A6NIZ1 184 aa5.45□□□□□ -1.54
LSM1-202ENST00000520286 GOLGA8MH3BSY2 632 aa5.45□□□□□ -1.54
LSM1-202ENST00000520286 CLOCKO15516 846 aa5.45□□□□□ -1.54
LSM1-202ENST00000520286 DNAJB6O75190 326 aa5.45□□□□□ -1.54
LSM1-202ENST00000520286 APOEP02649 317 aa5.45□□□□□ -1.54
LSM1-202ENST00000520286 PSMC3P17980 439 aa5.45□□□□□ -1.54
LSM1-202ENST00000520286 CXCR2P25025 360 aa5.45□□□□□ -1.54
LSM1-202ENST00000520286 HSD17B2P37059 387 aa5.45□□□□□ -1.54
LSM1-202ENST00000520286 KIR2DS4P43632 304 aa5.45□□□□□ -1.54
LSM1-202ENST00000520286 YAP1P46937 504 aaKnown RBP5.45□□□□□ -1.54
LSM1-202ENST00000520286 DIO3P55073 304 aa5.45□□□□□ -1.54
LSM1-202ENST00000520286 RAP1BP61224 184 aa5.45□□□□□ -1.54
LSM1-202ENST00000520286 RPS15P62841 145 aaKnown RBP5.45□□□□□ -1.54
LSM1-202ENST00000520286 KDSRQ06136 332 aa5.45□□□□□ -1.54
LSM1-202ENST00000520286 PDIA2Q13087 525 aaKnown RBP5.45□□□□□ -1.54
LSM1-202ENST00000520286 SELENBP1Q13228 472 aa5.45□□□□□ -1.54
LSM1-202ENST00000520286 TRIP13Q15645 432 aaPredicted RBP5.45□□□□□ -1.54
LSM1-202ENST00000520286 ALKBH6Q3KRA9 238 aa5.45□□□□□ -1.54
LSM1-202ENST00000520286 SLC25A48Q6ZT89 311 aaKnown RBP5.45□□□□□ -1.54
LSM1-202ENST00000520286 BIVMQ86UB2 503 aa5.45□□□□□ -1.54
LSM1-202ENST00000520286 FBXO16Q8IX29 292 aaPredicted RBP5.45□□□□□ -1.54
LSM1-202ENST00000520286 CD177Q8N6Q3 437 aa5.45□□□□□ -1.54
LSM1-202ENST00000520286 TRIML2Q8N7C3 387 aa5.45□□□□□ -1.54
LSM1-202ENST00000520286 CCDC71LQ8N9Z2 235 aa5.45□□□□□ -1.54
LSM1-202ENST00000520286 OR4C5Q8NGB2 326 aa5.45□□□□□ -1.54
LSM1-202ENST00000520286 ZNF564Q8TBZ8 553 aaPredicted RBP5.45□□□□□ -1.54
LSM1-202ENST00000520286 SLC22A8Q8TCC7 542 aa5.45□□□□□ -1.54
LSM1-202ENST00000520286 OR1E3Q8WZA6 343 aa5.45□□□□□ -1.54
LSM1-202ENST00000520286 SLC38A4Q969I6 547 aa5.45□□□□□ -1.54
LSM1-202ENST00000520286 TAMM41Q96BW9 452 aa5.45□□□□□ -1.54
LSM1-202ENST00000520286 DUS3LQ96G46 650 aaKnown RBP5.45□□□□□ -1.54
LSM1-202ENST00000520286 CNBD2Q96M20 576 aa5.45□□□□□ -1.54
LSM1-202ENST00000520286 SMIM14Q96QK8 99 aa5.45□□□□□ -1.54
LSM1-202ENST00000520286 C11orf70Q9BRQ4 267 aa5.45□□□□□ -1.54
LSM1-202ENST00000520286 FAIM2Q9BWQ8 316 aa5.45□□□□□ -1.54
LSM1-202ENST00000520286 OSBPL11Q9BXB4 747 aa5.45□□□□□ -1.54
LSM1-202ENST00000520286 ANKRD60Q9BZ19 345 aa5.45□□□□□ -1.54
LSM1-202ENST00000520286 MFFQ9GZY8 342 aa5.45□□□□□ -1.54
LSM1-202ENST00000520286 RNF167Q9H6Y7 350 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms