RNA–Protein interactions for RNA: ENST00000519664.1

SYNPO-204, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNPO, Length 4,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-204ENST00000519664 OR1M1Q8NGA1 313 aa10.59□□□□□ -0.71
SYNPO-204ENST00000519664 UPRTQ96BW1 309 aa10.59□□□□□ -0.71
SYNPO-204ENST00000519664 RPS10P5Q9NQ39 176 aa10.59□□□□□ -0.71
SYNPO-204ENST00000519664 GPR84Q9NQS5 396 aa10.59□□□□□ -0.71
SYNPO-204ENST00000519664 PADI1Q9ULC6 663 aa10.59□□□□□ -0.71
SYNPO-204ENST00000519664 IGKV1-8A0A0C4DH67 115 aa10.59□□□□□ -0.71
SYNPO-204ENST00000519664 LILRB5O75023 590 aa10.59□□□□□ -0.71
SYNPO-204ENST00000519664 RGS11O94810 467 aa10.59□□□□□ -0.71
SYNPO-204ENST00000519664 WNT1P04628 370 aa10.59□□□□□ -0.71
SYNPO-204ENST00000519664 CARD18P57730 90 aa10.59□□□□□ -0.71
SYNPO-204ENST00000519664 SLC17A1Q14916 467 aa10.59□□□□□ -0.71
SYNPO-204ENST00000519664 ZNF813Q6ZN06 617 aa10.59□□□□□ -0.71
SYNPO-204ENST00000519664 FAM122BQ7Z309 247 aa10.59□□□□□ -0.71
SYNPO-204ENST00000519664 ADGRG3Q86Y34 549 aa10.59□□□□□ -0.71
SYNPO-204ENST00000519664 ADGRL4Q9HBW9 690 aa10.59□□□□□ -0.71
SYNPO-204ENST00000519664 OR14J1Q9UGF5 321 aa10.59□□□□□ -0.71
SYNPO-204ENST00000519664 ZGLP1P0C6A0 271 aa10.59□□□□□ -0.71
SYNPO-204ENST00000519664 RPS27AP62979 156 aaKnown RBP10.59□□□□□ -0.71
SYNPO-204ENST00000519664 UBA52P62987 128 aaKnown RBP10.59□□□□□ -0.71
SYNPO-204ENST00000519664 SLC35A1P78382 337 aa10.59□□□□□ -0.71
SYNPO-204ENST00000519664 PSG6Q00889 435 aa10.59□□□□□ -0.71
SYNPO-204ENST00000519664 BDH1Q02338 343 aa10.59□□□□□ -0.71
SYNPO-204ENST00000519664 ETFDHQ16134 617 aa10.59□□□□□ -0.71
SYNPO-204ENST00000519664 MKXQ8IYA7 352 aa10.59□□□□□ -0.71
SYNPO-204ENST00000519664 GABRG1Q8N1C3 465 aa10.59□□□□□ -0.71
SYNPO-204ENST00000519664 LAT2Q9GZY6 243 aa10.59□□□□□ -0.71
SYNPO-204ENST00000519664 UBE2ZQ9H832 354 aaPredicted RBP10.59□□□□□ -0.71
SYNPO-204ENST00000519664 CDH20Q9HBT6 801 aa10.59□□□□□ -0.71
SYNPO-204ENST00000519664 FLRT3Q9NZU0 649 aa10.59□□□□□ -0.71
SYNPO-204ENST00000519664 NDRG3Q9UGV2 375 aa10.59□□□□□ -0.71
SYNPO-204ENST00000519664 MCTS1Q9ULC4 181 aaKnown RBP10.59□□□□□ -0.71
SYNPO-204ENST00000519664 WNK3Q9BYP7 1800 aa10.59□□□□□ -0.71
SYNPO-204ENST00000519664 SLC22A23A1A5C7 686 aa10.58□□□□□ -0.72
SYNPO-204ENST00000519664 LMO7DNF2Z398 122 aa10.58□□□□□ -0.72
SYNPO-204ENST00000519664 H0YIG0 161 aa10.58□□□□□ -0.72
SYNPO-204ENST00000519664 GPR171O14626 319 aa10.58□□□□□ -0.72
SYNPO-204ENST00000519664 ALOX5APP20292 161 aa10.58□□□□□ -0.72
SYNPO-204ENST00000519664 PPT1P50897 306 aa10.58□□□□□ -0.72
SYNPO-204ENST00000519664 ARG2P78540 354 aa10.58□□□□□ -0.72
SYNPO-204ENST00000519664 LTC4SQ16873 150 aa10.58□□□□□ -0.72
SYNPO-204ENST00000519664 TMEM201Q5SNT2 666 aa10.58□□□□□ -0.72
SYNPO-204ENST00000519664 CMTM1Q8IZ96 169 aa10.58□□□□□ -0.72
SYNPO-204ENST00000519664 KIAA1958Q8N8K9 716 aa10.58□□□□□ -0.72
SYNPO-204ENST00000519664 OR4C16Q8NGL9 310 aa10.58□□□□□ -0.72
SYNPO-204ENST00000519664 NANPQ8TBE9 248 aa10.58□□□□□ -0.72
SYNPO-204ENST00000519664 FBXW5Q969U6 566 aa10.58□□□□□ -0.72
SYNPO-204ENST00000519664 CHST11Q9NPF2 352 aa10.58□□□□□ -0.72
SYNPO-204ENST00000519664 PIGLQ9Y2B2 252 aa10.58□□□□□ -0.72
SYNPO-204ENST00000519664 ARHGEF17Q96PE2 2063 aaPredicted RBP10.58□□□□□ -0.72
SYNPO-204ENST00000519664 LOC105371267A0A1B0GV96 52 aa10.58□□□□□ -0.72
SYNPO-204ENST00000519664 MED6O75586 246 aa10.58□□□□□ -0.72
SYNPO-204ENST00000519664 MPZL1O95297 269 aa10.58□□□□□ -0.72
SYNPO-204ENST00000519664 FOLR1P15328 257 aa10.58□□□□□ -0.72
SYNPO-204ENST00000519664 GNB3P16520 340 aa10.58□□□□□ -0.72
SYNPO-204ENST00000519664 ABCD3P28288 659 aa10.58□□□□□ -0.72
SYNPO-204ENST00000519664 EFNA3P52797 238 aa10.58□□□□□ -0.72
SYNPO-204ENST00000519664 PEA15Q15121 130 aa10.58□□□□□ -0.72
SYNPO-204ENST00000519664 TOMM34Q15785 309 aaPredicted RBP10.58□□□□□ -0.72
SYNPO-204ENST00000519664 IAH1Q2TAA2 248 aaPredicted RBP10.58□□□□□ -0.72
SYNPO-204ENST00000519664 FAM74A1Q5RGS3 127 aa10.58□□□□□ -0.72
SYNPO-204ENST00000519664 MRM1Q6IN84 353 aaKnown RBP10.58□□□□□ -0.72
SYNPO-204ENST00000519664 MISPQ8IVT2 679 aa10.58□□□□□ -0.72
SYNPO-204ENST00000519664 PXT1Q8NFP0 134 aa10.58□□□□□ -0.72
SYNPO-204ENST00000519664 STK35Q8TDR2 534 aa10.58□□□□□ -0.72
SYNPO-204ENST00000519664 MIXL1Q9H2W2 232 aa10.58□□□□□ -0.72
SYNPO-204ENST00000519664 KCNK15Q9H427 330 aa10.58□□□□□ -0.72
SYNPO-204ENST00000519664 RAB22AQ9UL26 194 aa10.58□□□□□ -0.72
SYNPO-204ENST00000519664 OR6C65A6NJZ3 312 aa10.58□□□□□ -0.72
SYNPO-204ENST00000519664 DDAH2O95865 285 aa10.58□□□□□ -0.72
SYNPO-204ENST00000519664 ATP1B3P54709 279 aa10.58□□□□□ -0.72
SYNPO-204ENST00000519664 PRSS12P56730 875 aa10.58□□□□□ -0.72
SYNPO-204ENST00000519664 DYRK1AQ13627 763 aa10.58□□□□□ -0.72
SYNPO-204ENST00000519664 FJX1Q86VR8 437 aa10.58□□□□□ -0.72
SYNPO-204ENST00000519664 HSD17B11Q8NBQ5 300 aa10.58□□□□□ -0.72
SYNPO-204ENST00000519664 SMIM4Q8WVI0 70 aa10.58□□□□□ -0.72
SYNPO-204ENST00000519664 TXNIPQ9H3M7 391 aa10.58□□□□□ -0.72
SYNPO-204ENST00000519664 ZNF768Q9H5H4 540 aaKnown RBP10.58□□□□□ -0.72
SYNPO-204ENST00000519664 PYCARD-AS1I3L0S3 204 aa10.58□□□□□ -0.72
SYNPO-204ENST00000519664 IFNA4P05014 189 aa10.58□□□□□ -0.72
SYNPO-204ENST00000519664 SNRNP70P08621 437 aaKnown RBP10.58□□□□□ -0.72
SYNPO-204ENST00000519664 CCR5P51681 352 aa10.58□□□□□ -0.72
SYNPO-204ENST00000519664 RNF4P78317 190 aa10.58□□□□□ -0.72
SYNPO-204ENST00000519664 ZNF117Q03924 483 aa10.58□□□□□ -0.72
SYNPO-204ENST00000519664 FOXF1Q12946 379 aa10.58□□□□□ -0.72
SYNPO-204ENST00000519664 CD226Q15762 336 aa10.58□□□□□ -0.72
SYNPO-204ENST00000519664 ZNF529Q6P280 563 aa10.58□□□□□ -0.72
SYNPO-204ENST00000519664 OGFOD3Q6PK18 319 aa10.58□□□□□ -0.72
SYNPO-204ENST00000519664 LYPD8Q6UX82 237 aa10.58□□□□□ -0.72
SYNPO-204ENST00000519664 OR2I1PQ8NGU4 316 aa10.58□□□□□ -0.72
SYNPO-204ENST00000519664 OR1S1Q8NH92 325 aa10.58□□□□□ -0.72
SYNPO-204ENST00000519664 CPT1CQ8TCG5 803 aa10.58□□□□□ -0.72
SYNPO-204ENST00000519664 SLC25A21Q9BQT8 299 aaPredicted RBP10.58□□□□□ -0.72
SYNPO-204ENST00000519664 JAM3Q9BX67 310 aa10.58□□□□□ -0.72
SYNPO-204ENST00000519664 METTL9Q9H1A3 318 aa10.58□□□□□ -0.72
SYNPO-204ENST00000519664 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.58□□□□□ -0.72
SYNPO-204ENST00000519664 GPR173Q9NS66 373 aa10.58□□□□□ -0.72
SYNPO-204ENST00000519664 FAM166BA8MTA8 275 aa10.57□□□□□ -0.72
SYNPO-204ENST00000519664 METTL12A8MUP2 240 aa10.57□□□□□ -0.72
SYNPO-204ENST00000519664 PLPP2O43688 288 aa10.57□□□□□ -0.72
SYNPO-204ENST00000519664 ABHD16AO95870 558 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms