RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 MBNL2Q5VZF2 373 aaKnown RBP9.78□□□□□ -0.84
VCAN-212ENST00000515397 DNM1P34Q6PK57 102 aa9.78□□□□□ -0.84
VCAN-212ENST00000515397 ZBTB46Q86UZ6 589 aa9.78□□□□□ -0.84
VCAN-212ENST00000515397 HIPK1Q86Z02 1210 aa9.78□□□□□ -0.84
VCAN-212ENST00000515397 ZNF511Q8NB15 262 aa9.78□□□□□ -0.84
VCAN-212ENST00000515397 PROKR2Q8NFJ6 384 aa9.78□□□□□ -0.84
VCAN-212ENST00000515397 OR10G2Q8NGC3 310 aa9.78□□□□□ -0.84
VCAN-212ENST00000515397 GIPC3Q8TF64 312 aa9.78□□□□□ -0.84
VCAN-212ENST00000515397 OTULINQ96BN8 352 aa9.78□□□□□ -0.84
VCAN-212ENST00000515397 PITX2Q99697 317 aa9.78□□□□□ -0.84
VCAN-212ENST00000515397 CDADC1Q9BWV3 514 aa9.78□□□□□ -0.84
VCAN-212ENST00000515397 CADM1Q9BY67 442 aaKnown RBP9.78□□□□□ -0.84
VCAN-212ENST00000515397 DECR2Q9NUI1 292 aa9.78□□□□□ -0.84
VCAN-212ENST00000515397 DCAF16Q9NXF7 216 aa9.78□□□□□ -0.84
VCAN-212ENST00000515397 PDP1Q9P0J1 537 aaPredicted RBP9.78□□□□□ -0.84
VCAN-212ENST00000515397 GPR160Q9UJ42 338 aa9.78□□□□□ -0.84
VCAN-212ENST00000515397 POMPQ9Y244 141 aa9.78□□□□□ -0.84
VCAN-212ENST00000515397 CUBNO60494 3623 aa9.78□□□□□ -0.84
VCAN-212ENST00000515397 COL6A5A8TX70 2615 aa9.78□□□□□ -0.84
VCAN-212ENST00000515397 IGHV1-69-2A0A0G2JMI3 117 aa9.77□□□□□ -0.85
VCAN-212ENST00000515397 FAM183AA6NL82 134 aa9.77□□□□□ -0.85
VCAN-212ENST00000515397 F5H5K5 113 aa9.77□□□□□ -0.85
VCAN-212ENST00000515397 DNAJC8O75937 253 aaPredicted RBP9.77□□□□□ -0.85
VCAN-212ENST00000515397 TACSTD2P09758 323 aa9.77□□□□□ -0.85
VCAN-212ENST00000515397 COX5BP10606 129 aa9.77□□□□□ -0.85
VCAN-212ENST00000515397 ANOS1P23352 680 aa9.77□□□□□ -0.85
VCAN-212ENST00000515397 IGFBP5P24593 272 aa9.77□□□□□ -0.85
VCAN-212ENST00000515397 GGT2P36268 569 aa9.77□□□□□ -0.85
VCAN-212ENST00000515397 CHN2P52757 468 aa9.77□□□□□ -0.85
VCAN-212ENST00000515397 HIST1H3AP68431 136 aa9.77□□□□□ -0.85
VCAN-212ENST00000515397 MOGQ16653 247 aa9.77□□□□□ -0.85
VCAN-212ENST00000515397 SLC36A3Q495N2 470 aa9.77□□□□□ -0.85
VCAN-212ENST00000515397 DNAL1Q4LDG9 190 aa9.77□□□□□ -0.85
VCAN-212ENST00000515397 HIST2H3PS2Q5TEC6 136 aa9.77□□□□□ -0.85
VCAN-212ENST00000515397 OR2T2Q6IF00 324 aa9.77□□□□□ -0.85
VCAN-212ENST00000515397 SLC18B1Q6NT16 456 aa9.77□□□□□ -0.85
VCAN-212ENST00000515397 ARL9Q6T311 187 aa9.77□□□□□ -0.85
VCAN-212ENST00000515397 Q6ZR03 302 aa9.77□□□□□ -0.85
VCAN-212ENST00000515397 HIST2H3AQ71DI3 136 aa9.77□□□□□ -0.85
VCAN-212ENST00000515397 SPATC1Q76KD6 591 aa9.77□□□□□ -0.85
VCAN-212ENST00000515397 LINC00471Q8N535 108 aa9.77□□□□□ -0.85
VCAN-212ENST00000515397 GJC3Q8NFK1 279 aa9.77□□□□□ -0.85
VCAN-212ENST00000515397 CLDND2Q8NHS1 167 aa9.77□□□□□ -0.85
VCAN-212ENST00000515397 CCL17Q92583 94 aa9.77□□□□□ -0.85
VCAN-212ENST00000515397 SLCO4A1Q96BD0 722 aa9.77□□□□□ -0.85
VCAN-212ENST00000515397 MDFIQ99750 246 aa9.77□□□□□ -0.85
VCAN-212ENST00000515397 HCAR1Q9BXC0 346 aa9.77□□□□□ -0.85
VCAN-212ENST00000515397 BEX2Q9BXY8 128 aa9.77□□□□□ -0.85
VCAN-212ENST00000515397 DGCR6LQ9BY27 220 aa9.77□□□□□ -0.85
VCAN-212ENST00000515397 RACGAP1Q9H0H5 632 aa9.77□□□□□ -0.85
VCAN-212ENST00000515397 TBCCD1Q9NVR7 557 aa9.77□□□□□ -0.85
VCAN-212ENST00000515397 KLHL21Q9UJP4 597 aa9.77□□□□□ -0.85
VCAN-212ENST00000515397 PURGQ9UJV8 347 aaKnown RBP9.77□□□□□ -0.85
VCAN-212ENST00000515397 N6AMT1Q9Y5N5 214 aa9.77□□□□□ -0.85
VCAN-212ENST00000515397 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.76□□□□□ -0.854e-13■■■■□ 26.6
VCAN-212ENST00000515397 PLSCR5A0PG75 271 aa9.76□□□□□ -0.85
VCAN-212ENST00000515397 C5orf63A6NC05 138 aa9.76□□□□□ -0.85
VCAN-212ENST00000515397 AQP12BA6NM10 295 aa9.76□□□□□ -0.85
VCAN-212ENST00000515397 FAM157AC9JC47 383 aa9.76□□□□□ -0.85
VCAN-212ENST00000515397 H3BN98 237 aa9.76□□□□□ -0.85
VCAN-212ENST00000515397 TIPRLO75663 272 aa9.76□□□□□ -0.85
VCAN-212ENST00000515397 ACHEP22303 614 aa9.76□□□□□ -0.85
VCAN-212ENST00000515397 CRYBB2P43320 205 aa9.76□□□□□ -0.85
VCAN-212ENST00000515397 TMEM33P57088 247 aa9.76□□□□□ -0.85
VCAN-212ENST00000515397 CBX1P83916 185 aa9.76□□□□□ -0.85
VCAN-212ENST00000515397 SRSF2Q01130 221 aaKnown RBP9.76□□□□□ -0.85
VCAN-212ENST00000515397 BNIP1Q12981 228 aa9.76□□□□□ -0.85
VCAN-212ENST00000515397 CHRFAM7AQ494W8 412 aa9.76□□□□□ -0.85
VCAN-212ENST00000515397 FAM166AQ6J272 317 aa9.76□□□□□ -0.85
VCAN-212ENST00000515397 ACSM5Q6NUN0 579 aa9.76□□□□□ -0.85
VCAN-212ENST00000515397 UNQ6126/PRO20091Q6UXV3 157 aa9.76□□□□□ -0.85
VCAN-212ENST00000515397 AQP12AQ8IXF9 295 aa9.76□□□□□ -0.85
VCAN-212ENST00000515397 LNX2Q8N448 690 aa9.76□□□□□ -0.85
VCAN-212ENST00000515397 OR2Z1Q8NG97 314 aa9.76□□□□□ -0.85
VCAN-212ENST00000515397 OR10S1Q8NGN2 331 aa9.76□□□□□ -0.85
VCAN-212ENST00000515397 OR2AJ1Q8NGZ0 328 aa9.76□□□□□ -0.85
VCAN-212ENST00000515397 MAP6Q96JE9 813 aa9.76□□□□□ -0.85
VCAN-212ENST00000515397 DCLRE1CQ96SD1 692 aaKnown RBP9.76□□□□□ -0.85
VCAN-212ENST00000515397 WACQ9BTA9 647 aa9.76□□□□□ -0.85
VCAN-212ENST00000515397 SAP30LQ9HAJ7 183 aa9.76□□□□□ -0.85
VCAN-212ENST00000515397 CYB5R1Q9UHQ9 305 aa9.76□□□□□ -0.85
VCAN-212ENST00000515397 H0YL77 283 aa9.75□□□□□ -0.85
VCAN-212ENST00000515397 ICMTO60725 284 aa9.75□□□□□ -0.85
VCAN-212ENST00000515397 FKBP6O75344 327 aa9.75□□□□□ -0.85
VCAN-212ENST00000515397 E2F6O75461 281 aa9.75□□□□□ -0.85
VCAN-212ENST00000515397 MT-ND5P03915 603 aa9.75□□□□□ -0.85
VCAN-212ENST00000515397 ZNF823P16415 610 aa9.75□□□□□ -0.85
VCAN-212ENST00000515397 SPI1P17947 270 aa9.75□□□□□ -0.85
VCAN-212ENST00000515397 GSTM3P21266 225 aa9.75□□□□□ -0.85
VCAN-212ENST00000515397 LMO4P61968 165 aa9.75□□□□□ -0.85
VCAN-212ENST00000515397 TNFAIP6P98066 277 aaPredicted RBP9.75□□□□□ -0.85
VCAN-212ENST00000515397 COX10Q12887 443 aa9.75□□□□□ -0.85
VCAN-212ENST00000515397 PCGF3Q3KNV8 242 aa9.75□□□□□ -0.85
VCAN-212ENST00000515397 FAM120AOSQ5T036 256 aa9.75□□□□□ -0.85
VCAN-212ENST00000515397 TMEM236Q5W0B7 351 aa9.75□□□□□ -0.85
VCAN-212ENST00000515397 RPL13AP3Q6NVV1 102 aa9.75□□□□□ -0.85
VCAN-212ENST00000515397 BHLHE23Q8NDY6 225 aa9.75□□□□□ -0.85
VCAN-212ENST00000515397 OR2T33Q8NG76 320 aa9.75□□□□□ -0.85
VCAN-212ENST00000515397 OR6K6Q8NGW6 343 aa9.75□□□□□ -0.85
VCAN-212ENST00000515397 PTP4A1Q93096 173 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms