RNA–Protein interactions for RNA: ENST00000514611.1

PFDN1-206, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-206ENST00000514611 SPICQ8N5J4 248 aa11.21□□□□□ -0.61
PFDN1-206ENST00000514611 ZNF420Q8TAQ5 688 aaPredicted RBP11.21□□□□□ -0.61
PFDN1-206ENST00000514611 FAM216AQ8WUB2 273 aa11.21□□□□□ -0.61
PFDN1-206ENST00000514611 HAVCR1Q96D42 359 aa11.21□□□□□ -0.61
PFDN1-206ENST00000514611 CMTM5Q96DZ9 223 aa11.21□□□□□ -0.61
PFDN1-206ENST00000514611 ERMAPQ96PL5 475 aaPredicted RBP11.21□□□□□ -0.61
PFDN1-206ENST00000514611 SUCNR1Q9BXA5 334 aa11.21□□□□□ -0.61
PFDN1-206ENST00000514611 FAM107BQ9H098 131 aa11.21□□□□□ -0.61
PFDN1-206ENST00000514611 OR52D1Q9H346 318 aa11.21□□□□□ -0.61
PFDN1-206ENST00000514611 WDR76Q9H967 626 aa11.21□□□□□ -0.61
PFDN1-206ENST00000514611 KRCC1Q9NPI7 259 aaPredicted RBP11.21□□□□□ -0.61
PFDN1-206ENST00000514611 IL19Q9UHD0 177 aa11.21□□□□□ -0.61
PFDN1-206ENST00000514611 PPP1R3CQ9UQK1 317 aa11.21□□□□□ -0.61
PFDN1-206ENST00000514611 IGLV1-36A0A0B4J1U3 117 aa11.2□□□□□ -0.62
PFDN1-206ENST00000514611 IGHV3-64DA0A0J9YX35 117 aa11.2□□□□□ -0.62
PFDN1-206ENST00000514611 TRAPPC2LH3BP13 241 aa11.2□□□□□ -0.62
PFDN1-206ENST00000514611 TRIM77I1YAP6 450 aa11.2□□□□□ -0.62
PFDN1-206ENST00000514611 ZNF205O95201 554 aa11.2□□□□□ -0.62
PFDN1-206ENST00000514611 RAC2P15153 192 aa11.2□□□□□ -0.62
PFDN1-206ENST00000514611 TUBG1P23258 451 aa11.2□□□□□ -0.62
PFDN1-206ENST00000514611 KRT72Q14CN4 511 aa11.2□□□□□ -0.62
PFDN1-206ENST00000514611 KCNMB1Q16558 191 aa11.2□□□□□ -0.62
PFDN1-206ENST00000514611 TMEM155Q4W5P6 130 aa11.2□□□□□ -0.62
PFDN1-206ENST00000514611 CFAP77Q6ZQR2 320 aa11.2□□□□□ -0.62
PFDN1-206ENST00000514611 KLHL36Q8N4N3 616 aa11.2□□□□□ -0.62
PFDN1-206ENST00000514611 ZDHHC22Q8N966 263 aa11.2□□□□□ -0.62
PFDN1-206ENST00000514611 ATG16L2Q8NAA4 619 aa11.2□□□□□ -0.62
PFDN1-206ENST00000514611 BHLHE23Q8NDY6 225 aa11.2□□□□□ -0.62
PFDN1-206ENST00000514611 PTP4A1Q93096 173 aa11.2□□□□□ -0.62
PFDN1-206ENST00000514611 NMNAT3Q96T66 252 aa11.2□□□□□ -0.62
PFDN1-206ENST00000514611 COQ7Q99807 217 aa11.2□□□□□ -0.62
PFDN1-206ENST00000514611 HDHD2Q9H0R4 259 aa11.2□□□□□ -0.62
PFDN1-206ENST00000514611 FN3KQ9H479 309 aa11.2□□□□□ -0.62
PFDN1-206ENST00000514611 PATZ1Q9HBE1 687 aaKnown RBP11.2□□□□□ -0.62
PFDN1-206ENST00000514611 GCM1Q9NP62 436 aa11.2□□□□□ -0.62
PFDN1-206ENST00000514611 TUBG2Q9NRH3 451 aa11.2□□□□□ -0.62
PFDN1-206ENST00000514611 ATPIF1Q9UII2 106 aa11.2□□□□□ -0.62
PFDN1-206ENST00000514611 CEACAM18A8MTB9 384 aa11.19□□□□□ -0.62
PFDN1-206ENST00000514611 F5H0A9 414 aaPredicted RBP11.19□□□□□ -0.62
PFDN1-206ENST00000514611 H0YL77 283 aa11.19□□□□□ -0.62
PFDN1-206ENST00000514611 TMEM178BH3BS89 294 aa11.19□□□□□ -0.62
PFDN1-206ENST00000514611 J3QW42 95 aa11.19□□□□□ -0.62
PFDN1-206ENST00000514611 MLNRO43193 412 aa11.19□□□□□ -0.62
PFDN1-206ENST00000514611 GADD45GO95257 159 aa11.19□□□□□ -0.62
PFDN1-206ENST00000514611 CYB5R3P00387 301 aaPredicted RBP11.19□□□□□ -0.62
PFDN1-206ENST00000514611 HIST1H1CP16403 213 aaKnown RBP11.19□□□□□ -0.62
PFDN1-206ENST00000514611 SELEP16581 610 aa11.19□□□□□ -0.62
PFDN1-206ENST00000514611 PRDX6P30041 224 aa11.19□□□□□ -0.62
PFDN1-206ENST00000514611 MSX2P35548 267 aaPredicted RBP11.19□□□□□ -0.62
PFDN1-206ENST00000514611 COMPP49747 757 aaPredicted RBP11.19□□□□□ -0.62
PFDN1-206ENST00000514611 RGS6P49758 472 aa11.19□□□□□ -0.62
PFDN1-206ENST00000514611 HIST1H3AP68431 136 aa11.19□□□□□ -0.62
PFDN1-206ENST00000514611 ZNF154Q13106 437 aa11.19□□□□□ -0.62
PFDN1-206ENST00000514611 RFX4Q33E94 735 aa11.19□□□□□ -0.62
PFDN1-206ENST00000514611 HIST2H3PS2Q5TEC6 136 aa11.19□□□□□ -0.62
PFDN1-206ENST00000514611 DNM1P34Q6PK57 102 aa11.19□□□□□ -0.62
PFDN1-206ENST00000514611 FBXW12Q6X9E4 464 aa11.19□□□□□ -0.62
PFDN1-206ENST00000514611 HIST2H3AQ71DI3 136 aa11.19□□□□□ -0.62
PFDN1-206ENST00000514611 JAZF1Q86VZ6 243 aa11.19□□□□□ -0.62
PFDN1-206ENST00000514611 LRRC28Q86X40 367 aaPredicted RBP11.19□□□□□ -0.62
PFDN1-206ENST00000514611 LINC00346Q8IVM7 164 aa11.19□□□□□ -0.62
PFDN1-206ENST00000514611 OR6V1Q8N148 313 aa11.19□□□□□ -0.62
PFDN1-206ENST00000514611 SDR9C7Q8NEX9 313 aa11.19□□□□□ -0.62
PFDN1-206ENST00000514611 GJC3Q8NFK1 279 aa11.19□□□□□ -0.62
PFDN1-206ENST00000514611 SLC26A10Q8NG04 563 aa11.19□□□□□ -0.62
PFDN1-206ENST00000514611 OR4K13Q8NH42 304 aa11.19□□□□□ -0.62
PFDN1-206ENST00000514611 GCDHQ92947 438 aaPredicted RBP11.19□□□□□ -0.62
PFDN1-206ENST00000514611 DVL3Q92997 716 aaPredicted RBP11.19□□□□□ -0.62
PFDN1-206ENST00000514611 PYURFQ96I23 114 aa11.19□□□□□ -0.62
PFDN1-206ENST00000514611 MEGF10Q96KG7 1140 aa11.19□□□□□ -0.62
PFDN1-206ENST00000514611 COG8Q96MW5 612 aa11.19□□□□□ -0.62
PFDN1-206ENST00000514611 JMJD8Q96S16 334 aa11.19□□□□□ -0.62
PFDN1-206ENST00000514611 RBM4Q9BWF3 364 aaKnown RBP11.19□□□□□ -0.62
PFDN1-206ENST00000514611 GORASP2Q9H8Y8 452 aa11.19□□□□□ -0.62
PFDN1-206ENST00000514611 SRA1Q9HD15 236 aaKnown RBP11.19□□□□□ -0.62
PFDN1-206ENST00000514611 RPRD1BQ9NQG5 326 aaKnown RBP11.19□□□□□ -0.62
PFDN1-206ENST00000514611 B9D1Q9UPM9 204 aa11.19□□□□□ -0.62
PFDN1-206ENST00000514611 PPIAL4AQ9Y536 164 aa11.19□□□□□ -0.62
PFDN1-206ENST00000514611 PPIAL4EA0A075B759 164 aa11.18□□□□□ -0.62
PFDN1-206ENST00000514611 PPIAL4CA0A0B4J2A2 164 aa11.18□□□□□ -0.62
PFDN1-206ENST00000514611 TMEM89A2RUT3 159 aa11.18□□□□□ -0.62
PFDN1-206ENST00000514611 A8MXK9 166 aa11.18□□□□□ -0.62
PFDN1-206ENST00000514611 PPIAL4DF5H284 164 aa11.18□□□□□ -0.62
PFDN1-206ENST00000514611 SURF4O15260 269 aa11.18□□□□□ -0.62
PFDN1-206ENST00000514611 OR10H3O60404 316 aa11.18□□□□□ -0.62
PFDN1-206ENST00000514611 GMNNO75496 209 aa11.18□□□□□ -0.62
PFDN1-206ENST00000514611 PPIAL4FP0DN26 164 aa11.18□□□□□ -0.62
PFDN1-206ENST00000514611 ZNF12P17014 697 aa11.18□□□□□ -0.62
PFDN1-206ENST00000514611 FPR3P25089 353 aa11.18□□□□□ -0.62
PFDN1-206ENST00000514611 CRABP1P29762 137 aa11.18□□□□□ -0.62
PFDN1-206ENST00000514611 RRM2P31350 389 aa11.18□□□□□ -0.62
PFDN1-206ENST00000514611 SLC6A6P31641 620 aa11.18□□□□□ -0.62
PFDN1-206ENST00000514611 MDH2P40926 338 aaKnown RBP11.18□□□□□ -0.62
PFDN1-206ENST00000514611 SLC6A9P48067 706 aa11.18□□□□□ -0.62
PFDN1-206ENST00000514611 COX10Q12887 443 aa11.18□□□□□ -0.62
PFDN1-206ENST00000514611 ARMCX4Q5H9R4 360 aa11.18□□□□□ -0.62
PFDN1-206ENST00000514611 KLF17Q5JT82 389 aaPredicted RBP11.18□□□□□ -0.62
PFDN1-206ENST00000514611 SLC18B1Q6NT16 456 aa11.18□□□□□ -0.62
PFDN1-206ENST00000514611 PGM2L1Q6PCE3 622 aa11.18□□□□□ -0.62
PFDN1-206ENST00000514611 OR8G5Q8NG78 346 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms