RNA–Protein interactions for RNA: ENST00000514305.5

USP53-208, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 2

Gene USP53, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-208ENST00000514305 RHOUQ7L0Q8 258 aa17.48■□□□□ 0.39
USP53-208ENST00000514305 TIGD4Q8IY51 512 aa17.48■□□□□ 0.39
USP53-208ENST00000514305 TMEM171Q8WVE6 324 aa17.48■□□□□ 0.39
USP53-208ENST00000514305 UBE2FQ969M7 185 aa17.48■□□□□ 0.39
USP53-208ENST00000514305 MRPL48Q96GC5 212 aaKnown RBP17.48■□□□□ 0.39
USP53-208ENST00000514305 PLPPR2Q96GM1 343 aa17.48■□□□□ 0.39
USP53-208ENST00000514305 CDH20Q9HBT6 801 aa17.48■□□□□ 0.39
USP53-208ENST00000514305 EIF3KQ9UBQ5 218 aaKnown RBP17.48■□□□□ 0.39
USP53-208ENST00000514305 LAMP5Q9UJQ1 280 aa17.48■□□□□ 0.39
USP53-208ENST00000514305 OR6C6A6NF89 314 aa17.47■□□□□ 0.39
USP53-208ENST00000514305 H7C1Q1 480 aa17.47■□□□□ 0.39
USP53-208ENST00000514305 DOK2O60496 412 aa17.47■□□□□ 0.39
USP53-208ENST00000514305 APOC1P02654 83 aa17.47■□□□□ 0.39
USP53-208ENST00000514305 PATE4P0C8F1 98 aa17.47■□□□□ 0.39
USP53-208ENST00000514305 GABRB1P18505 474 aa17.47■□□□□ 0.39
USP53-208ENST00000514305 ISL1P61371 349 aa17.47■□□□□ 0.39
USP53-208ENST00000514305 GALK2Q01415 458 aa17.47■□□□□ 0.39
USP53-208ENST00000514305 TAF13Q15543 124 aa17.47■□□□□ 0.39
USP53-208ENST00000514305 KCTD18Q6PI47 426 aaPredicted RBP17.47■□□□□ 0.39
USP53-208ENST00000514305 DPY19L4Q7Z388 723 aa17.47■□□□□ 0.39
USP53-208ENST00000514305 C1orf174Q8IYL3 243 aa17.47■□□□□ 0.39
USP53-208ENST00000514305 SLC30A7Q8NEW0 376 aa17.47■□□□□ 0.39
USP53-208ENST00000514305 OR4F15Q8NGB8 312 aa17.47■□□□□ 0.39
USP53-208ENST00000514305 ZNRF4Q8WWF5 429 aa17.47■□□□□ 0.39
USP53-208ENST00000514305 ASB17Q8WXJ9 295 aa17.47■□□□□ 0.39
USP53-208ENST00000514305 HTRA1Q92743 480 aa17.47■□□□□ 0.39
USP53-208ENST00000514305 COX4I2Q96KJ9 171 aa17.47■□□□□ 0.39
USP53-208ENST00000514305 DCLRE1CQ96SD1 692 aaKnown RBP17.47■□□□□ 0.39
USP53-208ENST00000514305 GSX2Q9BZM3 304 aa17.47■□□□□ 0.39
USP53-208ENST00000514305 CXorf56Q9H5V9 222 aa17.47■□□□□ 0.39
USP53-208ENST00000514305 GDF2Q9UK05 429 aaPredicted RBP17.47■□□□□ 0.39
USP53-208ENST00000514305 LHFPL6Q9Y693 200 aa17.47■□□□□ 0.39
USP53-208ENST00000514305 IGHV1-18A0A0C4DH31 117 aa17.46■□□□□ 0.39
USP53-208ENST00000514305 CCDC182A6NF36 153 aa17.46■□□□□ 0.39
USP53-208ENST00000514305 ZNF670-ZNF695F2Z2N8 137 aa17.46■□□□□ 0.39
USP53-208ENST00000514305 CLIC3O95833 236 aa17.46■□□□□ 0.39
USP53-208ENST00000514305 LYNP07948 512 aa17.46■□□□□ 0.39
USP53-208ENST00000514305 SBK2P0C263 348 aa17.46■□□□□ 0.39
USP53-208ENST00000514305 ZNF14P17017 642 aaPredicted RBP17.46■□□□□ 0.39
USP53-208ENST00000514305 STOMP27105 288 aa17.46■□□□□ 0.39
USP53-208ENST00000514305 HTR5AP47898 357 aa17.46■□□□□ 0.39
USP53-208ENST00000514305 PTH2RP49190 550 aa17.46■□□□□ 0.39
USP53-208ENST00000514305 HIST1H3AP68431 136 aa17.46■□□□□ 0.39
USP53-208ENST00000514305 MED21Q13503 144 aa17.46■□□□□ 0.39
USP53-208ENST00000514305 EIF2B1Q14232 305 aaKnown RBP17.46■□□□□ 0.39
USP53-208ENST00000514305 HIST2H3PS2Q5TEC6 136 aa17.46■□□□□ 0.39
USP53-208ENST00000514305 KRT80Q6KB66 452 aa17.46■□□□□ 0.39
USP53-208ENST00000514305 USP51Q70EK9 711 aa17.46■□□□□ 0.39
USP53-208ENST00000514305 HIST2H3AQ71DI3 136 aa17.46■□□□□ 0.39
USP53-208ENST00000514305 DCXRQ7Z4W1 244 aa17.46■□□□□ 0.39
USP53-208ENST00000514305 BCDIN3DQ7Z5W3 292 aaKnown RBP17.46■□□□□ 0.39
USP53-208ENST00000514305 HIST2H2ABQ8IUE6 130 aaPredicted RBP17.46■□□□□ 0.39
USP53-208ENST00000514305 OR51G2Q8NGK0 314 aa17.46■□□□□ 0.39
USP53-208ENST00000514305 OTOSQ8NHW6 89 aa17.46■□□□□ 0.39
USP53-208ENST00000514305 FGFBP3Q8TAT2 258 aa17.46■□□□□ 0.39
USP53-208ENST00000514305 THEM6Q8WUY1 208 aa17.46■□□□□ 0.39
USP53-208ENST00000514305 SPTSSAQ969W0 71 aa17.46■□□□□ 0.39
USP53-208ENST00000514305 COQ7Q99807 217 aa17.46■□□□□ 0.39
USP53-208ENST00000514305 ANKRD60Q9BZ19 345 aa17.46■□□□□ 0.39
USP53-208ENST00000514305 RNF115Q9Y4L5 304 aa17.46■□□□□ 0.39
USP53-208ENST00000514305 RER1O15258 196 aa17.45■□□□□ 0.38
USP53-208ENST00000514305 FADS2O95864 444 aaKnown RBP17.45■□□□□ 0.38
USP53-208ENST00000514305 OR2T7P0C7T2 308 aa17.45■□□□□ 0.38
USP53-208ENST00000514305 CECR9P0C854 216 aa17.45■□□□□ 0.38
USP53-208ENST00000514305 NAA10P41227 235 aaPredicted RBP17.45■□□□□ 0.38
USP53-208ENST00000514305 ACTC1P68032 377 aa17.45■□□□□ 0.38
USP53-208ENST00000514305 ACTA1P68133 377 aa17.45■□□□□ 0.38
USP53-208ENST00000514305 NAAAQ02083 359 aa17.45■□□□□ 0.38
USP53-208ENST00000514305 BSPH1Q075Z2 132 aa17.45■□□□□ 0.38
USP53-208ENST00000514305 LINC00346Q8IVM7 164 aa17.45■□□□□ 0.38
USP53-208ENST00000514305 OR2T27Q8NH04 317 aa17.45■□□□□ 0.38
USP53-208ENST00000514305 OR1F12Q8NHA8 337 aa17.45■□□□□ 0.38
USP53-208ENST00000514305 AKR7LQ8NHP1 331 aa17.45■□□□□ 0.38
USP53-208ENST00000514305 RNFT2Q96EX2 444 aa17.45■□□□□ 0.38
USP53-208ENST00000514305 WNT5BQ9H1J7 359 aa17.45■□□□□ 0.38
USP53-208ENST00000514305 SP140LQ9H930 580 aa17.45■□□□□ 0.38
USP53-208ENST00000514305 ELOVL3Q9HB03 270 aa17.45■□□□□ 0.38
USP53-208ENST00000514305 NPAP1Q9NZP6 1156 aa17.45■□□□□ 0.38
USP53-208ENST00000514305 POU2F3Q9UKI9 436 aa17.45■□□□□ 0.38
USP53-208ENST00000514305 NSD1Q96L73 2696 aaPredicted RBP17.44■□□□□ 0.38
USP53-208ENST00000514305 ZNF503-AS2A6NEH8 195 aa17.44■□□□□ 0.38
USP53-208ENST00000514305 DPRXA6NFQ7 191 aa17.44■□□□□ 0.38
USP53-208ENST00000514305 ZNF878C9JN71 531 aa17.44■□□□□ 0.38
USP53-208ENST00000514305 ABCD4O14678 606 aa17.44■□□□□ 0.38
USP53-208ENST00000514305 HS3ST1O14792 307 aa17.44■□□□□ 0.38
USP53-208ENST00000514305 SMAD7O15105 426 aaKnown RBP17.44■□□□□ 0.38
USP53-208ENST00000514305 ST8SIA5O15466 376 aa17.44■□□□□ 0.38
USP53-208ENST00000514305 SELENOFO60613 162 aa17.44■□□□□ 0.38
USP53-208ENST00000514305 MRPL3P09001 348 aaKnown RBP17.44■□□□□ 0.38
USP53-208ENST00000514305 MYF6P23409 242 aa17.44■□□□□ 0.38
USP53-208ENST00000514305 GRB2P62993 217 aaKnown RBP17.44■□□□□ 0.38
USP53-208ENST00000514305 RAB40BQ12829 278 aa17.44■□□□□ 0.38
USP53-208ENST00000514305 CDK5R2Q13319 367 aa17.44■□□□□ 0.38
USP53-208ENST00000514305 ZNF774Q6NX45 483 aa17.44■□□□□ 0.38
USP53-208ENST00000514305 TMEM154Q6P9G4 183 aa17.44■□□□□ 0.38
USP53-208ENST00000514305 CORO6Q6QEF8 472 aa17.44■□□□□ 0.38
USP53-208ENST00000514305 DEGS2Q6QHC5 323 aa17.44■□□□□ 0.38
USP53-208ENST00000514305 SLC22A25Q6T423 547 aa17.44■□□□□ 0.38
USP53-208ENST00000514305 VASH1Q7L8A9 365 aaPredicted RBP17.44■□□□□ 0.38
USP53-208ENST00000514305 SLC35F2Q8IXU6 374 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms