RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 SLC35E4Q6ICL7 350 aa9.02□□□□□ -0.97
DDX41-216ENST00000513562 OR2T2Q6IF00 324 aa9.02□□□□□ -0.97
DDX41-216ENST00000513562 SLC30A8Q8IWU4 369 aa9.02□□□□□ -0.97
DDX41-216ENST00000513562 C19orf18Q8NEA5 215 aa9.02□□□□□ -0.97
DDX41-216ENST00000513562 FNDC8Q8TC99 324 aa9.02□□□□□ -0.97
DDX41-216ENST00000513562 LIPHQ8WWY8 451 aa9.02□□□□□ -0.97
DDX41-216ENST00000513562 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.02□□□□□ -0.97
DDX41-216ENST00000513562 PHF21AQ96BD5 680 aa9.02□□□□□ -0.97
DDX41-216ENST00000513562 ZNF582Q96NG8 517 aaPredicted RBP9.02□□□□□ -0.97
DDX41-216ENST00000513562 RBP7Q96R05 134 aa9.02□□□□□ -0.97
DDX41-216ENST00000513562 TXNIPQ9H3M7 391 aa9.02□□□□□ -0.97
DDX41-216ENST00000513562 SSU72Q9NP77 194 aaKnown RBP9.02□□□□□ -0.97
DDX41-216ENST00000513562 POLE4Q9NR33 117 aa9.02□□□□□ -0.97
DDX41-216ENST00000513562 VAPAQ9P0L0 249 aa9.02□□□□□ -0.97
DDX41-216ENST00000513562 SLAMF8Q9P0V8 285 aa9.02□□□□□ -0.97
DDX41-216ENST00000513562 ERVK-18Q9QC07 812 aa9.02□□□□□ -0.97
DDX41-216ENST00000513562 TMCC3Q9ULS5 477 aa9.02□□□□□ -0.97
DDX41-216ENST00000513562 FAM96BQ9Y3D0 163 aa9.02□□□□□ -0.97
DDX41-216ENST00000513562 A0A1W2PPL8 197 aa9.01□□□□□ -0.97
DDX41-216ENST00000513562 RNASEK-C17orf49H0YIS7 233 aa9.01□□□□□ -0.97
DDX41-216ENST00000513562 OPN1SWP03999 348 aa9.01□□□□□ -0.97
DDX41-216ENST00000513562 SCG5P05408 212 aa9.01□□□□□ -0.97
DDX41-216ENST00000513562 FBP1P09467 338 aa9.01□□□□□ -0.97
DDX41-216ENST00000513562 GPX2P18283 190 aa9.01□□□□□ -0.97
DDX41-216ENST00000513562 GABRA5P31644 462 aa9.01□□□□□ -0.97
DDX41-216ENST00000513562 EFNB2P52799 333 aa9.01□□□□□ -0.97
DDX41-216ENST00000513562 TOP3AQ13472 1001 aaPredicted RBP9.01□□□□□ -0.97
DDX41-216ENST00000513562 CLEC12AQ5QGZ9 265 aa9.01□□□□□ -0.97
DDX41-216ENST00000513562 C11orf88Q6PI97 169 aa9.01□□□□□ -0.97
DDX41-216ENST00000513562 IGFN1Q86VF2 1251 aa9.01□□□□□ -0.97
DDX41-216ENST00000513562 PDZD9Q8IXQ8 264 aa9.01□□□□□ -0.97
DDX41-216ENST00000513562 CELF2-AS1Q8N7Q2 184 aa9.01□□□□□ -0.97
DDX41-216ENST00000513562 PCYOX1LQ8NBM8 494 aa9.01□□□□□ -0.97
DDX41-216ENST00000513562 PFN4Q8NHR9 129 aa9.01□□□□□ -0.97
DDX41-216ENST00000513562 ERGIC1Q969X5 290 aa9.01□□□□□ -0.97
DDX41-216ENST00000513562 SGTBQ96EQ0 304 aa9.01□□□□□ -0.97
DDX41-216ENST00000513562 SEMA6AQ9H2E6 1030 aa9.01□□□□□ -0.97
DDX41-216ENST00000513562 MMADHCQ9H3L0 296 aaPredicted RBP9.01□□□□□ -0.97
DDX41-216ENST00000513562 TOR3AQ9H497 397 aa9.01□□□□□ -0.97
DDX41-216ENST00000513562 SMURF1Q9HCE7 757 aa9.01□□□□□ -0.97
DDX41-216ENST00000513562 C20orf141Q9NUB4 165 aa9.01□□□□□ -0.97
DDX41-216ENST00000513562 FOXJ3Q9UPW0 622 aa9.01□□□□□ -0.97
DDX41-216ENST00000513562 EPPK1P58107 5090 aaKnown RBP9□□□□□ -0.97
DDX41-216ENST00000513562 LOC100653049A0A140TA62 436 aa9□□□□□ -0.97
DDX41-216ENST00000513562 OR6C6A6NF89 314 aa9□□□□□ -0.97
DDX41-216ENST00000513562 ANKRD61A6NGH8 418 aa9□□□□□ -0.97
DDX41-216ENST00000513562 IQCF6A8MYZ5 107 aa9□□□□□ -0.97
DDX41-216ENST00000513562 UBDO15205 165 aa9□□□□□ -0.97
DDX41-216ENST00000513562 SGCEO43556 437 aa9□□□□□ -0.97
DDX41-216ENST00000513562 KRT34O76011 436 aa9□□□□□ -0.97
DDX41-216ENST00000513562 VIMP08670 466 aaKnown RBP9□□□□□ -0.97
DDX41-216ENST00000513562 RBM34P42696 430 aaKnown RBP9□□□□□ -0.97
DDX41-216ENST00000513562 RAD23AP54725 363 aa9□□□□□ -0.97
DDX41-216ENST00000513562 RPL27P61353 136 aaKnown RBP9□□□□□ -0.97
DDX41-216ENST00000513562 ARF6P62330 175 aa9□□□□□ -0.97
DDX41-216ENST00000513562 HOXA4Q00056 320 aaPredicted RBP9□□□□□ -0.97
DDX41-216ENST00000513562 MAB21L1Q13394 359 aa9□□□□□ -0.97
DDX41-216ENST00000513562 MPP2Q14168 576 aa9□□□□□ -0.97
DDX41-216ENST00000513562 LAPTM4AQ15012 233 aa9□□□□□ -0.97
DDX41-216ENST00000513562 KCNJ8Q15842 424 aa9□□□□□ -0.97
DDX41-216ENST00000513562 ALG10Q5BKT4 473 aa9□□□□□ -0.97
DDX41-216ENST00000513562 C1orf94Q6P1W5 598 aa9□□□□□ -0.97
DDX41-216ENST00000513562 MAVSQ7Z434 540 aa9□□□□□ -0.97
DDX41-216ENST00000513562 C11orf44Q8N8P7 122 aa9□□□□□ -0.97
DDX41-216ENST00000513562 OR11L1Q8NGX0 322 aa9□□□□□ -0.97
DDX41-216ENST00000513562 OR5R1Q8NH85 324 aa9□□□□□ -0.97
DDX41-216ENST00000513562 LRRC8CQ8TDW0 803 aa9□□□□□ -0.97
DDX41-216ENST00000513562 NPRL2Q8WTW4 380 aa9□□□□□ -0.97
DDX41-216ENST00000513562 SLC7A6Q92536 515 aa9□□□□□ -0.97
DDX41-216ENST00000513562 RASD2Q96D21 266 aa9□□□□□ -0.97
DDX41-216ENST00000513562 WWC2-AS2Q96NR7 200 aa9□□□□□ -0.97
DDX41-216ENST00000513562 OR52B2Q96RD2 323 aa9□□□□□ -0.97
DDX41-216ENST00000513562 PPA2Q9H2U2 334 aa9□□□□□ -0.97
DDX41-216ENST00000513562 EMC7Q9NPA0 242 aa9□□□□□ -0.97
DDX41-216ENST00000513562 PTTG3PQ9NZH4 202 aa9□□□□□ -0.97
DDX41-216ENST00000513562 CORO2BQ9UQ03 480 aa9□□□□□ -0.97
DDX41-216ENST00000513562 SIGLEC9Q9Y336 463 aa9□□□□□ -0.97
DDX41-216ENST00000513562 CAB39Q9Y376 341 aaPredicted RBP9□□□□□ -0.97
DDX41-216ENST00000513562 KPTNQ9Y664 436 aa9□□□□□ -0.97
DDX41-216ENST00000513562 A0A1B0GVI7 797 aa8.99□□□□□ -0.97
DDX41-216ENST00000513562 ELOVL7A1L3X0 281 aa8.99□□□□□ -0.97
DDX41-216ENST00000513562 M0QX08 132 aa8.99□□□□□ -0.97
DDX41-216ENST00000513562 FAM20BO75063 409 aa8.99□□□□□ -0.97
DDX41-216ENST00000513562 SNNO75324 88 aaPredicted RBP8.99□□□□□ -0.97
DDX41-216ENST00000513562 FCN3O75636 299 aa8.99□□□□□ -0.97
DDX41-216ENST00000513562 KITP10721 976 aa8.99□□□□□ -0.97
DDX41-216ENST00000513562 CD247P20963 164 aa8.99□□□□□ -0.97
DDX41-216ENST00000513562 CD200P41217 278 aa8.99□□□□□ -0.97
DDX41-216ENST00000513562 MRPL19P49406 292 aaKnown RBP8.99□□□□□ -0.97
DDX41-216ENST00000513562 RGS6P49758 472 aa8.99□□□□□ -0.97
DDX41-216ENST00000513562 C11orf91Q3C1V1 193 aa8.99□□□□□ -0.97
DDX41-216ENST00000513562 CDONQ4KMG0 1287 aa8.99□□□□□ -0.97
DDX41-216ENST00000513562 PAGE3Q5JUK9 113 aa8.99□□□□□ -0.97
DDX41-216ENST00000513562 FOXB2Q5VYV0 432 aa8.99□□□□□ -0.97
DDX41-216ENST00000513562 METAP1DQ6UB28 335 aaPredicted RBP8.99□□□□□ -0.97
DDX41-216ENST00000513562 BTN2A1Q7KYR7 527 aa8.99□□□□□ -0.97
DDX41-216ENST00000513562 VMO1Q7Z5L0 202 aa8.99□□□□□ -0.97
DDX41-216ENST00000513562 KLHDC1Q8N7A1 406 aa8.99□□□□□ -0.97
DDX41-216ENST00000513562 SPERTQ8NA61 448 aa8.99□□□□□ -0.97
DDX41-216ENST00000513562 C11orf65Q8NCR3 313 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms