RNA–Protein interactions for RNA: ENST00000508604.5

NUP54-208, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-208ENST00000508604 OR51A7Q8NH64 312 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 ITFG1Q8TB96 612 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 ACTL9Q8TC94 416 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 ACTRT1Q8TDG2 376 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 NEK7Q8TDX7 302 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 UBTD2Q8WUN7 234 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 SFT2D1Q8WV19 159 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 DEDD2Q8WXF8 326 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 PNPLA2Q96AD5 504 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 TMEM186Q96B77 213 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 ZHX1-C8orf76Q96EF9 292 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 C14orf144Q96I85 54 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 PRRC1Q96M27 445 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 PACRGQ96M98 296 aaPredicted RBP1.42□□□□□ -2.18
NUP54-208ENST00000508604 HBEGFQ99075 208 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 NIPSNAP1Q9BPW8 284 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 DDA1Q9BW61 102 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 SLC17A9Q9BYT1 436 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 UCK2Q9BZX2 261 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 TMEM117Q9H0C3 514 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 POLR3FQ9H1D9 316 aaPredicted RBP1.42□□□□□ -2.18
NUP54-208ENST00000508604 MIXL1Q9H2W2 232 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 Q9H3A6 140 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 TRABDQ9H4I3 376 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 FBXO44Q9H4M3 255 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 ANKRD19PQ9H560 264 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 NIPAL2Q9H841 368 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 UGT1A7Q9HAW7 530 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 UGT1A10Q9HAW8 530 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 UGT1A8Q9HAW9 530 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 ANKHQ9HCJ1 492 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 CSNK1G1Q9HCP0 422 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 ZDHHC4Q9NPG8 344 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 PRMT8Q9NR22 394 aaPredicted RBP1.42□□□□□ -2.18
NUP54-208ENST00000508604 SAR1AQ9NR31 198 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 FBXO8Q9NRD0 319 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 TECRQ9NZ01 308 aaKnown RBP1.42□□□□□ -2.18
NUP54-208ENST00000508604 COPZ2Q9P299 210 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 MYEF2Q9P2K5 600 aaKnown RBP1.42□□□□□ -2.18
NUP54-208ENST00000508604 RNF14Q9UBS8 474 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 SMPXQ9UHP9 88 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 C3orf18Q9UK00 162 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 OR52A1Q9UKL2 312 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 BAIAP2Q9UQB8 552 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 PRG3Q9Y2Y8 225 aaPredicted RBP1.42□□□□□ -2.18
NUP54-208ENST00000508604 MMACHCQ9Y4U1 282 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 PPIAL4AQ9Y536 164 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 WIF1Q9Y5W5 379 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 SAR1BQ9Y6B6 198 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 A2MP01023 1474 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 GRIN2AQ12879 1464 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 USP47Q96K76 1375 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 CEP152O94986 1710 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 EIF4G3O43432 1585 aaKnown RBP1.42□□□□□ -2.18
NUP54-208ENST00000508604 MYH6P13533 1939 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 MYH4Q9Y623 1939 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 A0A087WZY1 265 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 TRAV25A0A0B4J276 109 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 A0A0G2JMP0 313 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 A0A0X1KG70 313 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 A0A1B0GUH1 482 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 FAM240BA0A1B0GVZ2 78 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 A0A1W2PPV4 95 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 METTL21EPA6NDL7 271 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 CCDC182A6NF36 153 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 HELTA6NFD8 242 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 OR52A4PA6NMU1 304 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 A8MUI8 341 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 NPIPA7E9PJI5 369 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 TSTD3H0UI37 97 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 H3BSA7 217 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 K7EP13 123 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 PSMD12O00232 456 aaPredicted RBP1.42□□□□□ -2.18
NUP54-208ENST00000508604 SLC17A2O00624 439 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 BHLHE40O14503 412 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 CDIPTO14735 213 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 RGS5O15539 181 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 NME2P1O60361 137 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 GGCTO75223 188 aaKnown RBP1.42□□□□□ -2.18
NUP54-208ENST00000508604 ZNF780AO75290 641 aaPredicted RBP1.42□□□□□ -2.18
NUP54-208ENST00000508604 UGT2B11O75310 529 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 ENTPD5O75356 428 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 SPAG7O75391 227 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 UGT2B17O75795 530 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 EIF3GO75821 320 aaKnown RBP eCLIP1.42□□□□□ -2.18
NUP54-208ENST00000508604 ZMPSTE24O75844 475 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 SUPT7LO94864 414 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 TSPAN12O95859 305 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 TXNDC12O95881 172 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 TGFAP01135 160 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 PCCAP05165 728 aaPredicted RBP1.42□□□□□ -2.18
NUP54-208ENST00000508604 UGT2B4P06133 528 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 ANXA4P09525 319 aaPredicted RBP1.42□□□□□ -2.18
NUP54-208ENST00000508604 METTL15P1P0C7V9 234 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 GIMD1P0DJR0 217 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 NPIPA8P0DM63 369 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 RRASP10301 218 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 SCGB1A1P11684 91 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 ZNF30P17039 623 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 ZNF7P17097 686 aaPredicted RBP1.42□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms