RNA–Protein interactions for RNA: ENST00000506941.1

NPHP4-210, Transcript of nephrocystin 4, humanhuman

TSL 4

Gene NPHP4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-210ENST00000506941 ZIK1Q3SY52 487 aaPredicted RBP15.6■□□□□ 0.09
NPHP4-210ENST00000506941 DCXRQ7Z4W1 244 aa15.6■□□□□ 0.09
NPHP4-210ENST00000506941 TMEM163Q8TC26 289 aa15.6■□□□□ 0.09
NPHP4-210ENST00000506941 ST7LQ8TDW4 575 aa15.6■□□□□ 0.09
NPHP4-210ENST00000506941 TRMT61AQ96FX7 289 aaKnown RBP15.6■□□□□ 0.09
NPHP4-210ENST00000506941 MARS2Q96GW9 593 aaKnown RBP15.6■□□□□ 0.09
NPHP4-210ENST00000506941 IL4I1Q96RQ9 567 aa15.6■□□□□ 0.09
NPHP4-210ENST00000506941 INTS14Q96SY0 518 aa15.6■□□□□ 0.09
NPHP4-210ENST00000506941 MBOAT4Q96T53 435 aa15.6■□□□□ 0.09
NPHP4-210ENST00000506941 ATF6BQ99941 703 aa15.6■□□□□ 0.09
NPHP4-210ENST00000506941 PRRG3Q9BZD7 231 aa15.6■□□□□ 0.09
NPHP4-210ENST00000506941 EIF3KQ9UBQ5 218 aaKnown RBP15.6■□□□□ 0.09
NPHP4-210ENST00000506941 GRIP1Q9Y3R0 1128 aa15.6■□□□□ 0.09
NPHP4-210ENST00000506941 ACANP16112 2415 aa15.59■□□□□ 0.09
NPHP4-210ENST00000506941 VSTM5A8MXK1 200 aa15.59■□□□□ 0.09
NPHP4-210ENST00000506941 TLX2O43763 284 aaPredicted RBP15.59■□□□□ 0.09
NPHP4-210ENST00000506941 MPV17P39210 176 aa15.59■□□□□ 0.09
NPHP4-210ENST00000506941 EVX1P49640 407 aa15.59■□□□□ 0.09
NPHP4-210ENST00000506941 PPP1CBP62140 327 aa15.59■□□□□ 0.09
NPHP4-210ENST00000506941 SLC35D3Q5M8T2 416 aa15.59■□□□□ 0.09
NPHP4-210ENST00000506941 ZBTB49Q6ZSB9 765 aa15.59■□□□□ 0.09
NPHP4-210ENST00000506941 DPY19L4Q7Z388 723 aa15.59■□□□□ 0.09
NPHP4-210ENST00000506941 ZCCHC24Q8N2G6 241 aaKnown RBP15.59■□□□□ 0.09
NPHP4-210ENST00000506941 OR6N2Q8NGY6 317 aa15.59■□□□□ 0.09
NPHP4-210ENST00000506941 SLC25A40Q8TBP6 338 aa15.59■□□□□ 0.09
NPHP4-210ENST00000506941 EME1Q96AY2 570 aa15.59■□□□□ 0.09
NPHP4-210ENST00000506941 SORCS2Q96PQ0 1159 aa15.59■□□□□ 0.09
NPHP4-210ENST00000506941 OR2J1Q9GZK6 312 aa15.59■□□□□ 0.09
NPHP4-210ENST00000506941 TOR3AQ9H497 397 aa15.59■□□□□ 0.09
NPHP4-210ENST00000506941 ELOVL3Q9HB03 270 aa15.59■□□□□ 0.09
NPHP4-210ENST00000506941 DDX28Q9NUL7 540 aaKnown RBP15.59■□□□□ 0.09
NPHP4-210ENST00000506941 DUSP13Q9UII6 198 aa15.59■□□□□ 0.09
NPHP4-210ENST00000506941 ORC6Q9Y5N6 252 aa15.59■□□□□ 0.09
NPHP4-210ENST00000506941 PMF1-BGLAPU3KQ54 211 aa15.59■□□□□ 0.09
NPHP4-210ENST00000506941 IGLV3-9A0A075B6K5 115 aa15.58■□□□□ 0.08
NPHP4-210ENST00000506941 NAA10P41227 235 aaPredicted RBP15.58■□□□□ 0.08
NPHP4-210ENST00000506941 PPOXP50336 477 aa15.58■□□□□ 0.08
NPHP4-210ENST00000506941 RAD23AP54725 363 aa15.58■□□□□ 0.08
NPHP4-210ENST00000506941 RPS7P62081 194 aaKnown RBP15.58■□□□□ 0.08
NPHP4-210ENST00000506941 ELF3P78545 371 aaPredicted RBP15.58■□□□□ 0.08
NPHP4-210ENST00000506941 ECH1Q13011 328 aa15.58■□□□□ 0.08
NPHP4-210ENST00000506941 MAD2L1BPQ15013 274 aaPredicted RBP15.58■□□□□ 0.08
NPHP4-210ENST00000506941 AADACL4Q5VUY2 407 aa15.58■□□□□ 0.08
NPHP4-210ENST00000506941 SHEQ5VZ18 495 aa15.58■□□□□ 0.08
NPHP4-210ENST00000506941 SYNPRQ8TBG9 265 aa15.58■□□□□ 0.08
NPHP4-210ENST00000506941 IPCEF1Q8WWN9 437 aaPredicted RBP15.58■□□□□ 0.08
NPHP4-210ENST00000506941 SLAMF6Q96DU3 332 aa15.58■□□□□ 0.08
NPHP4-210ENST00000506941 HRASLS5Q96KN8 279 aa15.58■□□□□ 0.08
NPHP4-210ENST00000506941 DCLRE1CQ96SD1 692 aaKnown RBP15.58■□□□□ 0.08
NPHP4-210ENST00000506941 AMELYQ99218 206 aa15.58■□□□□ 0.08
NPHP4-210ENST00000506941 TEAD3Q99594 435 aa15.58■□□□□ 0.08
NPHP4-210ENST00000506941 TBCCD1Q9NVR7 557 aa15.58■□□□□ 0.08
NPHP4-210ENST00000506941 STARD10Q9Y365 291 aa15.58■□□□□ 0.08
NPHP4-210ENST00000506941 YLPM1P49750 1951 aaKnown RBP15.58■□□□□ 0.08
NPHP4-210ENST00000506941 TANC2Q9HCD6 1990 aa15.58■□□□□ 0.08
NPHP4-210ENST00000506941 LY6HO94772 140 aa15.57■□□□□ 0.08
NPHP4-210ENST00000506941 ADRA2AP08913 450 aa15.57■□□□□ 0.08
NPHP4-210ENST00000506941 ACSM4P0C7M7 580 aa15.57■□□□□ 0.08
NPHP4-210ENST00000506941 BMP4P12644 408 aa15.57■□□□□ 0.08
NPHP4-210ENST00000506941 ANOS1P23352 680 aa15.57■□□□□ 0.08
NPHP4-210ENST00000506941 ALDH3B1P43353 468 aa15.57■□□□□ 0.08
NPHP4-210ENST00000506941 KLF3P57682 345 aaPredicted RBP15.57■□□□□ 0.08
NPHP4-210ENST00000506941 EIF2B1Q14232 305 aaKnown RBP15.57■□□□□ 0.08
NPHP4-210ENST00000506941 ARL9Q6T311 187 aa15.57■□□□□ 0.08
NPHP4-210ENST00000506941 PRSS57Q6UWY2 283 aa15.57■□□□□ 0.08
NPHP4-210ENST00000506941 SPATC1Q76KD6 591 aa15.57■□□□□ 0.08
NPHP4-210ENST00000506941 NAA40Q86UY6 237 aa15.57■□□□□ 0.08
NPHP4-210ENST00000506941 KLF14Q8TD94 323 aaPredicted RBP15.57■□□□□ 0.08
NPHP4-210ENST00000506941 VRK1Q99986 396 aaPredicted RBP15.57■□□□□ 0.08
NPHP4-210ENST00000506941 ABHD6Q9BV23 337 aa15.57■□□□□ 0.08
NPHP4-210ENST00000506941 KLHDC2Q9Y2U9 406 aa15.57■□□□□ 0.08
NPHP4-210ENST00000506941 F5H5K5 113 aa15.56■□□□□ 0.08
NPHP4-210ENST00000506941 DLGAP1O14490 977 aa15.56■□□□□ 0.08
NPHP4-210ENST00000506941 IGHV3-13P01766 116 aa15.56■□□□□ 0.08
NPHP4-210ENST00000506941 MRPL3P09001 348 aaKnown RBP15.56■□□□□ 0.08
NPHP4-210ENST00000506941 PEX2P28328 305 aa15.56■□□□□ 0.08
NPHP4-210ENST00000506941 OTX1P32242 354 aaPredicted RBP15.56■□□□□ 0.08
NPHP4-210ENST00000506941 TRIP10Q15642 601 aa15.56■□□□□ 0.08
NPHP4-210ENST00000506941 ALKBH6Q3KRA9 238 aa15.56■□□□□ 0.08
NPHP4-210ENST00000506941 ZNF718Q3SXZ3 478 aa15.56■□□□□ 0.08
NPHP4-210ENST00000506941 NXNL2Q5VZ03 156 aa15.56■□□□□ 0.08
NPHP4-210ENST00000506941 MBNL2Q5VZF2 373 aaKnown RBP15.56■□□□□ 0.08
NPHP4-210ENST00000506941 LPCAT4Q643R3 524 aa15.56■□□□□ 0.08
NPHP4-210ENST00000506941 UNQ6126/PRO20091Q6UXV3 157 aa15.56■□□□□ 0.08
NPHP4-210ENST00000506941 MEPCEQ7L2J0 689 aaKnown RBP15.56■□□□□ 0.08
NPHP4-210ENST00000506941 TGIF2LYQ8IUE0 185 aa15.56■□□□□ 0.08
NPHP4-210ENST00000506941 OTOSQ8NHW6 89 aa15.56■□□□□ 0.08
NPHP4-210ENST00000506941 FAM81AQ8TBF8 368 aa15.56■□□□□ 0.08
NPHP4-210ENST00000506941 GTF3AQ92664 365 aaKnown RBP15.56■□□□□ 0.08
NPHP4-210ENST00000506941 UBE2FQ969M7 185 aa15.56■□□□□ 0.08
NPHP4-210ENST00000506941 DYNLRB1Q9NP97 96 aa15.56■□□□□ 0.08
NPHP4-210ENST00000506941 TAAR3PQ9P1P4 343 aa15.56■□□□□ 0.08
NPHP4-210ENST00000506941 TEP1Q99973 2627 aaKnown RBP15.56■□□□□ 0.08
NPHP4-210ENST00000506941 A0A1W2PPW3 197 aa15.55■□□□□ 0.08
NPHP4-210ENST00000506941 ZNF878C9JN71 531 aa15.55■□□□□ 0.08
NPHP4-210ENST00000506941 H3BSA7 217 aa15.55■□□□□ 0.08
NPHP4-210ENST00000506941 M0R233 179 aa15.55■□□□□ 0.08
NPHP4-210ENST00000506941 RGS6P49758 472 aa15.55■□□□□ 0.08
NPHP4-210ENST00000506941 HCCSP53701 268 aa15.55■□□□□ 0.08
NPHP4-210ENST00000506941 CDC42P60953 191 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms