RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 SIKE1Q9BRV8 207 aa2.6□□□□□ -1.99
TCOF1-208ENST00000506063 DUSP26Q9BV47 211 aa2.6□□□□□ -1.99
TCOF1-208ENST00000506063 PTDSS2Q9BVG9 487 aa2.6□□□□□ -1.99
TCOF1-208ENST00000506063 NUF2Q9BZD4 464 aa2.6□□□□□ -1.99
TCOF1-208ENST00000506063 SLC19A3Q9BZV2 496 aa2.6□□□□□ -1.99
TCOF1-208ENST00000506063 HOXD1Q9GZZ0 328 aa2.6□□□□□ -1.99
TCOF1-208ENST00000506063 NSRP1Q9H0G5 558 aaKnown RBP2.6□□□□□ -1.99
TCOF1-208ENST00000506063 PIGUQ9H490 435 aa2.6□□□□□ -1.99
TCOF1-208ENST00000506063 RAD21L1Q9H4I0 556 aa2.6□□□□□ -1.99
TCOF1-208ENST00000506063 RNF121Q9H920 327 aa2.6□□□□□ -1.99
TCOF1-208ENST00000506063 VIPAS39Q9H9C1 493 aa2.6□□□□□ -1.99
TCOF1-208ENST00000506063 MEAF6Q9HAF1 191 aa2.6□□□□□ -1.99
TCOF1-208ENST00000506063 TMBIM4Q9HC24 238 aa2.6□□□□□ -1.99
TCOF1-208ENST00000506063 NANSQ9NR45 359 aa2.6□□□□□ -1.99
TCOF1-208ENST00000506063 MRGBPQ9NV56 204 aa2.6□□□□□ -1.99
TCOF1-208ENST00000506063 INTS9Q9NV88 658 aaKnown RBP2.6□□□□□ -1.99
TCOF1-208ENST00000506063 THAP1Q9NVV9 213 aa2.6□□□□□ -1.99
TCOF1-208ENST00000506063 ADPRHL2Q9NX46 363 aa2.6□□□□□ -1.99
TCOF1-208ENST00000506063 SIRT5Q9NXA8 310 aa2.6□□□□□ -1.99
TCOF1-208ENST00000506063 NDE1Q9NXR1 346 aa2.6□□□□□ -1.99
TCOF1-208ENST00000506063 ASIC5Q9NY37 505 aa2.6□□□□□ -1.99
TCOF1-208ENST00000506063 VNN3Q9NY84 501 aa2.6□□□□□ -1.99
TCOF1-208ENST00000506063 ERVK-18Q9QC07 812 aa2.6□□□□□ -1.99
TCOF1-208ENST00000506063 ATP6V1HQ9UI12 483 aa2.6□□□□□ -1.99
TCOF1-208ENST00000506063 NDRG4Q9ULP0 352 aaKnown RBP2.6□□□□□ -1.99
TCOF1-208ENST00000506063 RASD1Q9Y272 281 aa2.6□□□□□ -1.99
TCOF1-208ENST00000506063 LOC102725191A0A1B0GVB3 256 aa2.59□□□□□ -1.99
TCOF1-208ENST00000506063 PRAMEF27A3QJZ7 478 aa2.59□□□□□ -1.99
TCOF1-208ENST00000506063 CXorf65A6NEN9 183 aa2.59□□□□□ -1.99
TCOF1-208ENST00000506063 DUXAA6NLW8 204 aa2.59□□□□□ -1.99
TCOF1-208ENST00000506063 CLDN24A6NM45 220 aa2.59□□□□□ -1.99
TCOF1-208ENST00000506063 C16orf90A8MZG2 172 aa2.59□□□□□ -1.99
TCOF1-208ENST00000506063 MS4A18H0YCH9 400 aa2.59□□□□□ -1.99
TCOF1-208ENST00000506063 RNASET2O00584 256 aaKnown RBP2.59□□□□□ -1.99
TCOF1-208ENST00000506063 MLNRO43193 412 aa2.59□□□□□ -1.99
TCOF1-208ENST00000506063 TBX19O60806 448 aa2.59□□□□□ -1.99
TCOF1-208ENST00000506063 FAM20BO75063 409 aa2.59□□□□□ -1.99
TCOF1-208ENST00000506063 CYP7B1O75881 506 aa2.59□□□□□ -1.99
TCOF1-208ENST00000506063 KRT75O95678 551 aa2.59□□□□□ -1.99
TCOF1-208ENST00000506063 C6orf47O95873 294 aa2.59□□□□□ -1.99
TCOF1-208ENST00000506063 ECDO95905 644 aaPredicted RBP2.59□□□□□ -1.99
TCOF1-208ENST00000506063 HPRP00739 348 aa2.59□□□□□ -1.99
TCOF1-208ENST00000506063 CSTAP01040 98 aa2.59□□□□□ -1.99
TCOF1-208ENST00000506063 ALDOBP05062 364 aa2.59□□□□□ -1.99
TCOF1-208ENST00000506063 HMGN2P05204 90 aaKnown RBP2.59□□□□□ -1.99
TCOF1-208ENST00000506063 FGF4P08620 206 aa2.59□□□□□ -1.99
TCOF1-208ENST00000506063 TROVE2P10155 538 aaKnown RBP eCLIP2.59□□□□□ -1.99
TCOF1-208ENST00000506063 PNMTP11086 282 aa2.59□□□□□ -1.99
TCOF1-208ENST00000506063 G6PDP11413 515 aa2.59□□□□□ -1.99
TCOF1-208ENST00000506063 HLA-DOBP13765 273 aa2.59□□□□□ -1.99
TCOF1-208ENST00000506063 KITLGP21583 273 aa2.59□□□□□ -1.99
TCOF1-208ENST00000506063 PPIBP23284 216 aaKnown RBP2.59□□□□□ -1.99
TCOF1-208ENST00000506063 S100A3P33764 101 aa2.59□□□□□ -1.99
TCOF1-208ENST00000506063 IDH2P48735 452 aaKnown RBP2.59□□□□□ -1.99
TCOF1-208ENST00000506063 INSL3P51460 131 aa2.59□□□□□ -1.99
TCOF1-208ENST00000506063 POLR2HP52434 150 aaKnown RBP2.59□□□□□ -1.99
TCOF1-208ENST00000506063 SLC18A1P54219 525 aa2.59□□□□□ -1.99
TCOF1-208ENST00000506063 RAD23AP54725 363 aa2.59□□□□□ -1.99
TCOF1-208ENST00000506063 RAB25P57735 213 aa2.59□□□□□ -1.99
TCOF1-208ENST00000506063 LINC00205P59089 165 aa2.59□□□□□ -1.99
TCOF1-208ENST00000506063 PPP1CBP62140 327 aa2.59□□□□□ -1.99
TCOF1-208ENST00000506063 EMX2Q04743 252 aa2.59□□□□□ -1.99
TCOF1-208ENST00000506063 BNIP2Q12982 314 aa2.59□□□□□ -1.99
TCOF1-208ENST00000506063 SRSF7Q16629 238 aaKnown RBP eCLIP2.59□□□□□ -1.99
TCOF1-208ENST00000506063 GSTA3Q16772 222 aa2.59□□□□□ -1.99
TCOF1-208ENST00000506063 PGS1Q32NB8 556 aa2.59□□□□□ -1.99
TCOF1-208ENST00000506063 PDCD4Q53EL6 469 aaKnown RBP2.59□□□□□ -1.99
TCOF1-208ENST00000506063 ZNF385BQ569K4 471 aa2.59□□□□□ -1.99
TCOF1-208ENST00000506063 C6orf136Q5SQH8 315 aa2.59□□□□□ -1.99
TCOF1-208ENST00000506063 OGFOD2Q6N063 350 aa2.59□□□□□ -1.99
TCOF1-208ENST00000506063 ZCCHC12Q6PEW1 402 aa2.59□□□□□ -1.99
TCOF1-208ENST00000506063 ARL9Q6T311 187 aa2.59□□□□□ -1.99
TCOF1-208ENST00000506063 MSANTD1Q6ZTZ1 278 aa2.59□□□□□ -1.99
TCOF1-208ENST00000506063 LHFPL4Q7Z7J7 247 aa2.59□□□□□ -1.99
TCOF1-208ENST00000506063 ZNF329Q86UD4 541 aa2.59□□□□□ -1.99
TCOF1-208ENST00000506063 LYPD6Q86Y78 171 aa2.59□□□□□ -1.99
TCOF1-208ENST00000506063 ZNF695Q8IW36 515 aa2.59□□□□□ -1.99
TCOF1-208ENST00000506063 MIER2Q8N344 545 aa2.59□□□□□ -1.99
TCOF1-208ENST00000506063 SLC22A24Q8N4F4 322 aa2.59□□□□□ -1.99
TCOF1-208ENST00000506063 PIK3C3Q8NEB9 887 aa2.59□□□□□ -1.99
TCOF1-208ENST00000506063 OR7A2PQ8NGA2 310 aa2.59□□□□□ -1.99
TCOF1-208ENST00000506063 OR10AD1Q8NGE0 317 aa2.59□□□□□ -1.99
TCOF1-208ENST00000506063 OR5AK3PQ8NH89 298 aa2.59□□□□□ -1.99
TCOF1-208ENST00000506063 Q8TCH9 128 aa2.59□□□□□ -1.99
TCOF1-208ENST00000506063 PNPT1Q8TCS8 783 aaKnown RBP2.59□□□□□ -1.99
TCOF1-208ENST00000506063 OIT3Q8WWZ8 545 aa2.59□□□□□ -1.99
TCOF1-208ENST00000506063 OR5P2Q8WZ92 322 aa2.59□□□□□ -1.99
TCOF1-208ENST00000506063 TESCQ96BS2 214 aa2.59□□□□□ -1.99
TCOF1-208ENST00000506063 TLCD1Q96CP7 247 aa2.59□□□□□ -1.99
TCOF1-208ENST00000506063 DDIT4LQ96D03 193 aa2.59□□□□□ -1.99
TCOF1-208ENST00000506063 FAM120BQ96EK7 910 aaKnown RBP2.59□□□□□ -1.99
TCOF1-208ENST00000506063 C7orf26Q96N11 449 aa2.59□□□□□ -1.99
TCOF1-208ENST00000506063 OXGR1Q96P68 337 aa2.59□□□□□ -1.99
TCOF1-208ENST00000506063 PANX1Q96RD7 426 aa2.59□□□□□ -1.99
TCOF1-208ENST00000506063 SDF2Q99470 211 aa2.59□□□□□ -1.99
TCOF1-208ENST00000506063 SLC35A5Q9BS91 424 aa2.59□□□□□ -1.99
TCOF1-208ENST00000506063 EMC6Q9BV81 110 aa2.59□□□□□ -1.99
TCOF1-208ENST00000506063 C1orf198Q9H425 327 aa2.59□□□□□ -1.99
TCOF1-208ENST00000506063 TUBB1Q9H4B7 451 aa2.59□□□□□ -1.99
TCOF1-208ENST00000506063 RABEP2Q9H5N1 569 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms