RNA–Protein interactions for RNA: ENST00000504951.6

GYPB-204, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-204ENST00000504951 ZNF613Q6PF04 617 aa4.96□□□□□ -1.62
GYPB-204ENST00000504951 ARL9Q6T311 187 aa4.96□□□□□ -1.62
GYPB-204ENST00000504951 SLC16A14Q7RTX9 510 aa4.96□□□□□ -1.62
GYPB-204ENST00000504951 KRT73Q86Y46 540 aa4.96□□□□□ -1.62
GYPB-204ENST00000504951 ARMC8Q8IUR7 673 aa4.96□□□□□ -1.62
GYPB-204ENST00000504951 LRRC18Q8N456 261 aa4.96□□□□□ -1.62
GYPB-204ENST00000504951 CLDN22Q8N7P3 220 aa4.96□□□□□ -1.62
GYPB-204ENST00000504951 ICA1LQ8NDH6 482 aa4.96□□□□□ -1.62
GYPB-204ENST00000504951 OR8B3Q8NGG8 313 aa4.96□□□□□ -1.62
GYPB-204ENST00000504951 SLC25A40Q8TBP6 338 aa4.96□□□□□ -1.62
GYPB-204ENST00000504951 ADAMTS16Q8TE57 1224 aa4.96□□□□□ -1.62
GYPB-204ENST00000504951 GEMIN6Q8WXD5 167 aaKnown RBP4.96□□□□□ -1.62
GYPB-204ENST00000504951 MCHR2Q969V1 340 aa4.96□□□□□ -1.62
GYPB-204ENST00000504951 ZNF566Q969W8 418 aa4.96□□□□□ -1.62
GYPB-204ENST00000504951 ERGIC1Q969X5 290 aa4.96□□□□□ -1.62
GYPB-204ENST00000504951 NMD3Q96D46 503 aaKnown RBP4.96□□□□□ -1.62
GYPB-204ENST00000504951 WDFY2Q96P53 400 aa4.96□□□□□ -1.62
GYPB-204ENST00000504951 OR8B2Q96RD0 313 aa4.96□□□□□ -1.62
GYPB-204ENST00000504951 DCLRE1CQ96SD1 692 aaKnown RBP4.96□□□□□ -1.62
GYPB-204ENST00000504951 TBX15Q96SF7 602 aa4.96□□□□□ -1.62
GYPB-204ENST00000504951 TMEM246Q9BRR3 403 aa4.96□□□□□ -1.62
GYPB-204ENST00000504951 ZNF426Q9BUY5 554 aa4.96□□□□□ -1.62
GYPB-204ENST00000504951 SPATA5L1Q9BVQ7 753 aa4.96□□□□□ -1.62
GYPB-204ENST00000504951 MRPL13Q9BYD1 178 aaKnown RBP4.96□□□□□ -1.62
GYPB-204ENST00000504951 OR2J1Q9GZK6 312 aa4.96□□□□□ -1.62
GYPB-204ENST00000504951 RAD21L1Q9H4I0 556 aa4.96□□□□□ -1.62
GYPB-204ENST00000504951 RANBP3Q9H6Z4 567 aaPredicted RBP4.96□□□□□ -1.62
GYPB-204ENST00000504951 SMURF2Q9HAU4 748 aa4.96□□□□□ -1.62
GYPB-204ENST00000504951 SLCO1B3Q9NPD5 702 aa4.96□□□□□ -1.62
GYPB-204ENST00000504951 MEPEQ9NQ76 525 aaPredicted RBP4.96□□□□□ -1.62
GYPB-204ENST00000504951 CLN8Q9UBY8 286 aa4.96□□□□□ -1.62
GYPB-204ENST00000504951 NKX1-2Q9UD57 310 aaPredicted RBP4.96□□□□□ -1.62
GYPB-204ENST00000504951 VPREB3Q9UKI3 123 aa4.96□□□□□ -1.62
GYPB-204ENST00000504951 RAB21Q9UL25 225 aa4.96□□□□□ -1.62
GYPB-204ENST00000504951 CAB39Q9Y376 341 aaPredicted RBP4.96□□□□□ -1.62
GYPB-204ENST00000504951 UGT2A1Q9Y4X1 527 aa4.96□□□□□ -1.62
GYPB-204ENST00000504951 PRORSD1PA6NEY8 169 aa4.95□□□□□ -1.62
GYPB-204ENST00000504951 NPIPB13A6NJU9 1138 aa4.95□□□□□ -1.62
GYPB-204ENST00000504951 NPIPB4C9JG80 1138 aa4.95□□□□□ -1.62
GYPB-204ENST00000504951 BLOC1S5-TXNDC5H3BN57 136 aa4.95□□□□□ -1.62
GYPB-204ENST00000504951 NDUFA2O43678 99 aa4.95□□□□□ -1.62
GYPB-204ENST00000504951 SERPINB7O75635 380 aa4.95□□□□□ -1.62
GYPB-204ENST00000504951 TRMUO75648 421 aaKnown RBP4.95□□□□□ -1.62
GYPB-204ENST00000504951 TOX4O94842 621 aa4.95□□□□□ -1.62
GYPB-204ENST00000504951 ZFPL1O95159 310 aa4.95□□□□□ -1.62
GYPB-204ENST00000504951 OR6A2O95222 327 aa4.95□□□□□ -1.62
GYPB-204ENST00000504951 SLC2A10O95528 541 aa4.95□□□□□ -1.62
GYPB-204ENST00000504951 DUS4LO95620 317 aaKnown RBP4.95□□□□□ -1.62
GYPB-204ENST00000504951 ECDO95905 644 aaPredicted RBP4.95□□□□□ -1.62
GYPB-204ENST00000504951 COX5BP10606 129 aa4.95□□□□□ -1.62
GYPB-204ENST00000504951 RPS2P15880 293 aaKnown RBP4.95□□□□□ -1.62
GYPB-204ENST00000504951 ZNF32P17041 273 aa4.95□□□□□ -1.62
GYPB-204ENST00000504951 FUT1P19526 365 aa4.95□□□□□ -1.62
GYPB-204ENST00000504951 TNFRSF1BP20333 461 aa4.95□□□□□ -1.62
GYPB-204ENST00000504951 CD247P20963 164 aa4.95□□□□□ -1.62
GYPB-204ENST00000504951 CCNOP22674 350 aa4.95□□□□□ -1.62
GYPB-204ENST00000504951 SLC6A2P23975 617 aa4.95□□□□□ -1.62
GYPB-204ENST00000504951 GABRA5P31644 462 aa4.95□□□□□ -1.62
GYPB-204ENST00000504951 AQP2P41181 271 aa4.95□□□□□ -1.62
GYPB-204ENST00000504951 PITPNBP48739 271 aa4.95□□□□□ -1.62
GYPB-204ENST00000504951 ARHGDIAP52565 204 aa4.95□□□□□ -1.62
GYPB-204ENST00000504951 SLC18A1P54219 525 aa4.95□□□□□ -1.62
GYPB-204ENST00000504951 UGT2B15P54855 530 aa4.95□□□□□ -1.62
GYPB-204ENST00000504951 MTPNP58546 118 aa4.95□□□□□ -1.62
GYPB-204ENST00000504951 PPP1CBP62140 327 aa4.95□□□□□ -1.62
GYPB-204ENST00000504951 FMODQ06828 376 aa4.95□□□□□ -1.62
GYPB-204ENST00000504951 RPL18Q07020 188 aaKnown RBP4.95□□□□□ -1.62
GYPB-204ENST00000504951 EGFEM1PQ0D2K5 195 aa4.95□□□□□ -1.62
GYPB-204ENST00000504951 AANATQ16613 207 aa4.95□□□□□ -1.62
GYPB-204ENST00000504951 KLHL22Q53GT1 634 aa4.95□□□□□ -1.62
GYPB-204ENST00000504951 AGKQ53H12 422 aa4.95□□□□□ -1.62
GYPB-204ENST00000504951 RUNDC3AQ59EK9 446 aa4.95□□□□□ -1.62
GYPB-204ENST00000504951 PABPC1L2AQ5JQF8 200 aa4.95□□□□□ -1.62
GYPB-204ENST00000504951 FAM27BQ5VT28 67 aa4.95□□□□□ -1.62
GYPB-204ENST00000504951 Q6ZR03 302 aa4.95□□□□□ -1.62
GYPB-204ENST00000504951 DCDC5Q6ZRR9 648 aa4.95□□□□□ -1.62
GYPB-204ENST00000504951 RFPL4BQ6ZWI9 263 aa4.95□□□□□ -1.62
GYPB-204ENST00000504951 IGFN1Q86VF2 1251 aa4.95□□□□□ -1.62
GYPB-204ENST00000504951 RANBP3LQ86VV4 465 aaPredicted RBP4.95□□□□□ -1.62
GYPB-204ENST00000504951 NDUFA11Q86Y39 141 aa4.95□□□□□ -1.62
GYPB-204ENST00000504951 C1orf87Q8N0U7 546 aa4.95□□□□□ -1.62
GYPB-204ENST00000504951 CELF2-AS1Q8N7Q2 184 aa4.95□□□□□ -1.62
GYPB-204ENST00000504951 PNLDC1Q8NA58 520 aaKnown RBP4.95□□□□□ -1.62
GYPB-204ENST00000504951 NPEPL1Q8NDH3 523 aa4.95□□□□□ -1.62
GYPB-204ENST00000504951 RBM15BQ8NDT2 890 aaKnown RBP4.95□□□□□ -1.62
GYPB-204ENST00000504951 HIPK4Q8NE63 616 aa4.95□□□□□ -1.62
GYPB-204ENST00000504951 OR4F17Q8NGA8 305 aa4.95□□□□□ -1.62
GYPB-204ENST00000504951 AKR7LQ8NHP1 331 aa4.95□□□□□ -1.62
GYPB-204ENST00000504951 MOSPD2Q8NHP6 518 aa4.95□□□□□ -1.62
GYPB-204ENST00000504951 PFN4Q8NHR9 129 aa4.95□□□□□ -1.62
GYPB-204ENST00000504951 Q8TCH9 128 aa4.95□□□□□ -1.62
GYPB-204ENST00000504951 WIPF2Q8TF74 440 aaPredicted RBP4.95□□□□□ -1.62
GYPB-204ENST00000504951 ASB10Q8WXI3 467 aa4.95□□□□□ -1.62
GYPB-204ENST00000504951 HDAC2Q92769 488 aaKnown RBP4.95□□□□□ -1.62
GYPB-204ENST00000504951 NABP1Q96AH0 204 aa4.95□□□□□ -1.62
GYPB-204ENST00000504951 TAMM41Q96BW9 452 aa4.95□□□□□ -1.62
GYPB-204ENST00000504951 TLCD1Q96CP7 247 aa4.95□□□□□ -1.62
GYPB-204ENST00000504951 HAVCR1Q96D42 359 aa4.95□□□□□ -1.62
GYPB-204ENST00000504951 COG8Q96MW5 612 aa4.95□□□□□ -1.62
GYPB-204ENST00000504951 OR4F4Q96R69 305 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms