RNA–Protein interactions for RNA: ENST00000504841.6

NPIPB3-203, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

APPRIS P1 TSL 1 (best)

Gene NPIPB3, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-203ENST00000504841 C11orf65Q8NCR3 313 aa5.72□□□□□ -1.49
NPIPB3-203ENST00000504841 HAVCR1Q96D42 359 aa5.72□□□□□ -1.49
NPIPB3-203ENST00000504841 SPDL1Q96EA4 605 aa5.72□□□□□ -1.49
NPIPB3-203ENST00000504841 MAGEB18Q96M61 343 aa5.72□□□□□ -1.49
NPIPB3-203ENST00000504841 RBP7Q96R05 134 aa5.72□□□□□ -1.49
NPIPB3-203ENST00000504841 PRSS27Q9BQR3 290 aa5.72□□□□□ -1.49
NPIPB3-203ENST00000504841 CPPED1Q9BRF8 314 aaPredicted RBP5.72□□□□□ -1.49
NPIPB3-203ENST00000504841 ZNF426Q9BUY5 554 aa5.72□□□□□ -1.49
NPIPB3-203ENST00000504841 ALG12Q9BV10 488 aa5.72□□□□□ -1.49
NPIPB3-203ENST00000504841 TRIM15Q9C019 465 aa5.72□□□□□ -1.49
NPIPB3-203ENST00000504841 TXNIPQ9H3M7 391 aa5.72□□□□□ -1.49
NPIPB3-203ENST00000504841 TOR3AQ9H497 397 aa5.72□□□□□ -1.49
NPIPB3-203ENST00000504841 WDR76Q9H967 626 aa5.72□□□□□ -1.49
NPIPB3-203ENST00000504841 SSU72Q9NP77 194 aaKnown RBP5.72□□□□□ -1.49
NPIPB3-203ENST00000504841 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.72□□□□□ -1.49
NPIPB3-203ENST00000504841 TMCC3Q9ULS5 477 aa5.72□□□□□ -1.49
NPIPB3-203ENST00000504841 CORO2BQ9UQ03 480 aa5.72□□□□□ -1.49
NPIPB3-203ENST00000504841 VWFP04275 2813 aa5.72□□□□□ -1.49
NPIPB3-203ENST00000504841 TET2Q6N021 2002 aaPredicted RBP5.72□□□□□ -1.49
NPIPB3-203ENST00000504841 TRBV5-3A0A0A0MS03 114 aa5.71□□□□□ -1.5
NPIPB3-203ENST00000504841 IGHV1-69DA0A0B4J2H0 117 aa5.71□□□□□ -1.5
NPIPB3-203ENST00000504841 ZNF816-ZNF321PA0A0X1KG74 233 aa5.71□□□□□ -1.5
NPIPB3-203ENST00000504841 ELOVL7A1L3X0 281 aa5.71□□□□□ -1.5
NPIPB3-203ENST00000504841 ZNF879B4DU55 563 aa5.71□□□□□ -1.5
NPIPB3-203ENST00000504841 POLR3GO15318 223 aaPredicted RBP5.71□□□□□ -1.5
NPIPB3-203ENST00000504841 MLNRO43193 412 aa5.71□□□□□ -1.5
NPIPB3-203ENST00000504841 FAM20BO75063 409 aa5.71□□□□□ -1.5
NPIPB3-203ENST00000504841 SNNO75324 88 aaPredicted RBP5.71□□□□□ -1.5
NPIPB3-203ENST00000504841 IGHV1-69P01742 117 aa5.71□□□□□ -1.5
NPIPB3-203ENST00000504841 HLA-DPB1P04440 258 aa5.71□□□□□ -1.5
NPIPB3-203ENST00000504841 SCG5P05408 212 aa5.71□□□□□ -1.5
NPIPB3-203ENST00000504841 VSIG8P0DPA2 414 aa5.71□□□□□ -1.5
NPIPB3-203ENST00000504841 RAC2P15153 192 aa5.71□□□□□ -1.5
NPIPB3-203ENST00000504841 GPX2P18283 190 aa5.71□□□□□ -1.5
NPIPB3-203ENST00000504841 CPT2P23786 658 aa5.71□□□□□ -1.5
NPIPB3-203ENST00000504841 PMELP40967 661 aa5.71□□□□□ -1.5
NPIPB3-203ENST00000504841 IER3P46695 156 aa5.71□□□□□ -1.5
NPIPB3-203ENST00000504841 BPIFB3P59826 476 aa5.71□□□□□ -1.5
NPIPB3-203ENST00000504841 CTXN1P60606 82 aa5.71□□□□□ -1.5
NPIPB3-203ENST00000504841 RPL15P61313 204 aaKnown RBP5.71□□□□□ -1.5
NPIPB3-203ENST00000504841 RPL27P61353 136 aaKnown RBP5.71□□□□□ -1.5
NPIPB3-203ENST00000504841 PRB3Q04118 309 aaPredicted RBP5.71□□□□□ -1.5
NPIPB3-203ENST00000504841 DBPQ10586 325 aaPredicted RBP5.71□□□□□ -1.5
NPIPB3-203ENST00000504841 SAMD5Q5TGI4 173 aa5.71□□□□□ -1.5
NPIPB3-203ENST00000504841 PRAMEF6Q5VXH4 476 aa5.71□□□□□ -1.5
NPIPB3-203ENST00000504841 SFRP4Q6FHJ7 346 aaPredicted RBP5.71□□□□□ -1.5
NPIPB3-203ENST00000504841 Q6ZTK2 550 aa5.71□□□□□ -1.5
NPIPB3-203ENST00000504841 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.71□□□□□ -1.5
NPIPB3-203ENST00000504841 LDLRAD3Q86YD5 345 aa5.71□□□□□ -1.5
NPIPB3-203ENST00000504841 FUNDC1Q8IVP5 155 aa5.71□□□□□ -1.5
NPIPB3-203ENST00000504841 OR8G5Q8NG78 346 aa5.71□□□□□ -1.5
NPIPB3-203ENST00000504841 OR13G1Q8NGZ3 307 aa5.71□□□□□ -1.5
NPIPB3-203ENST00000504841 AENQ8WTP8 325 aaKnown RBP5.71□□□□□ -1.5
NPIPB3-203ENST00000504841 TMEM239Q8WW34 195 aa5.71□□□□□ -1.5
NPIPB3-203ENST00000504841 TAMM41Q96BW9 452 aa5.71□□□□□ -1.5
NPIPB3-203ENST00000504841 COG8Q96MW5 612 aa5.71□□□□□ -1.5
NPIPB3-203ENST00000504841 ZNF582Q96NG8 517 aaPredicted RBP5.71□□□□□ -1.5
NPIPB3-203ENST00000504841 WDFY2Q96P53 400 aa5.71□□□□□ -1.5
NPIPB3-203ENST00000504841 TMEM109Q9BVC6 243 aa5.71□□□□□ -1.5
NPIPB3-203ENST00000504841 SEMA6AQ9H2E6 1030 aa5.71□□□□□ -1.5
NPIPB3-203ENST00000504841 RASSF4Q9H2L5 321 aa5.71□□□□□ -1.5
NPIPB3-203ENST00000504841 RERGLQ9H628 205 aa5.71□□□□□ -1.5
NPIPB3-203ENST00000504841 POLE4Q9NR33 117 aa5.71□□□□□ -1.5
NPIPB3-203ENST00000504841 UFSP2Q9NUQ7 469 aa5.71□□□□□ -1.5
NPIPB3-203ENST00000504841 CTSZQ9UBR2 303 aa5.71□□□□□ -1.5
NPIPB3-203ENST00000504841 POLR1DQ9Y2S0 133 aa5.71□□□□□ -1.5
NPIPB3-203ENST00000504841 SH3GLB1Q9Y371 365 aa5.71□□□□□ -1.5
NPIPB3-203ENST00000504841 MED31Q9Y3C7 131 aa5.71□□□□□ -1.5
NPIPB3-203ENST00000504841 FAM96BQ9Y3D0 163 aa5.71□□□□□ -1.5
NPIPB3-203ENST00000504841 USH1CQ9Y6N9 552 aa5.71□□□□□ -1.5
NPIPB3-203ENST00000504841 DOCK11Q5JSL3 2073 aa5.71□□□□□ -1.5
NPIPB3-203ENST00000504841 TRAV27A0A087WT01 109 aa5.7□□□□□ -1.5
NPIPB3-203ENST00000504841 A0A1W2PRD5 423 aa5.7□□□□□ -1.5
NPIPB3-203ENST00000504841 A0A1W2PRF3 423 aa5.7□□□□□ -1.5
NPIPB3-203ENST00000504841 A0A1W2PRM7 423 aa5.7□□□□□ -1.5
NPIPB3-203ENST00000504841 TMEM120BA0PK00 339 aa5.7□□□□□ -1.5
NPIPB3-203ENST00000504841 ANKRD61A6NGH8 418 aa5.7□□□□□ -1.5
NPIPB3-203ENST00000504841 FBP2O00757 339 aa5.7□□□□□ -1.5
NPIPB3-203ENST00000504841 ADAM20O43506 726 aa5.7□□□□□ -1.5
NPIPB3-203ENST00000504841 OPN1MWP04001 364 aa5.7□□□□□ -1.5
NPIPB3-203ENST00000504841 DBHP09172 617 aa5.7□□□□□ -1.5
NPIPB3-203ENST00000504841 OPN1MW2P0DN77 364 aa5.7□□□□□ -1.5
NPIPB3-203ENST00000504841 OPN1MW3P0DN78 364 aa5.7□□□□□ -1.5
NPIPB3-203ENST00000504841 COX5BP10606 129 aa5.7□□□□□ -1.5
NPIPB3-203ENST00000504841 IFI30P13284 250 aa5.7□□□□□ -1.5
NPIPB3-203ENST00000504841 MMP9P14780 707 aa5.7□□□□□ -1.5
NPIPB3-203ENST00000504841 TUBG1P23258 451 aa5.7□□□□□ -1.5
NPIPB3-203ENST00000504841 FPR3P25089 353 aa5.7□□□□□ -1.5
NPIPB3-203ENST00000504841 RBM34P42696 430 aaKnown RBP5.7□□□□□ -1.5
NPIPB3-203ENST00000504841 LOXL3P58215 753 aa5.7□□□□□ -1.5
NPIPB3-203ENST00000504841 ARF6P62330 175 aa5.7□□□□□ -1.5
NPIPB3-203ENST00000504841 PIN1Q13526 163 aaPredicted RBP5.7□□□□□ -1.5
NPIPB3-203ENST00000504841 SELPLGQ14242 412 aa5.7□□□□□ -1.5
NPIPB3-203ENST00000504841 OR8B8Q15620 311 aa5.7□□□□□ -1.5
NPIPB3-203ENST00000504841 AGKQ53H12 422 aa5.7□□□□□ -1.5
NPIPB3-203ENST00000504841 KPRPQ5T749 579 aaPredicted RBP5.7□□□□□ -1.5
NPIPB3-203ENST00000504841 LCE2CQ5TA81 110 aa5.7□□□□□ -1.5
NPIPB3-203ENST00000504841 ZNF841Q6ZN19 808 aa5.7□□□□□ -1.5
NPIPB3-203ENST00000504841 GDPGP1Q6ZNW5 385 aa5.7□□□□□ -1.5
NPIPB3-203ENST00000504841 FOXL2NBQ6ZUU3 175 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms