RNA–Protein interactions for RNA: ENST00000504409.3

LINC02397-201, Transcript of long intergenic non-protein coding RNA 2397, humanhuman

TSL 1 (best) BASIC

Gene LINC02397, Length 10,626 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02397-201ENST00000504409 VTNP04004 478 aa5.56□□□□□ -1.52
LINC02397-201ENST00000504409 CARD18P57730 90 aa5.56□□□□□ -1.52
LINC02397-201ENST00000504409 INSM1Q01101 510 aaPredicted RBP5.56□□□□□ -1.52
LINC02397-201ENST00000504409 TEAD2Q15562 447 aa5.56□□□□□ -1.52
LINC02397-201ENST00000504409 TFAP2BQ92481 460 aa5.56□□□□□ -1.52
LINC02397-201ENST00000504409 NEIL1Q96FI4 390 aaPredicted RBP5.56□□□□□ -1.52
LINC02397-201ENST00000504409 LCORQ96JN0 433 aaPredicted RBP5.56□□□□□ -1.52
LINC02397-201ENST00000504409 WDR92Q96MX6 357 aa5.56□□□□□ -1.52
LINC02397-201ENST00000504409 ZNF724A8MTY0 619 aa5.56□□□□□ -1.52
LINC02397-201ENST00000504409 TMEM250H0YL14 139 aa5.56□□□□□ -1.52
LINC02397-201ENST00000504409 IGHA1P01876 353 aa5.56□□□□□ -1.52
LINC02397-201ENST00000504409 ADH4P08319 380 aa5.56□□□□□ -1.52
LINC02397-201ENST00000504409 GNG4P50150 75 aa5.56□□□□□ -1.52
LINC02397-201ENST00000504409 ZNF140P52738 457 aaPredicted RBP5.56□□□□□ -1.52
LINC02397-201ENST00000504409 AWAT1Q58HT5 328 aa5.56□□□□□ -1.52
LINC02397-201ENST00000504409 YOD1Q5VVQ6 348 aaPredicted RBP5.56□□□□□ -1.52
LINC02397-201ENST00000504409 OR4C11Q6IEV9 310 aa5.56□□□□□ -1.52
LINC02397-201ENST00000504409 FCRLAQ7L513 359 aa5.56□□□□□ -1.52
LINC02397-201ENST00000504409 NUP43Q8NFH3 380 aa5.56□□□□□ -1.52
LINC02397-201ENST00000504409 DTD1Q8TEA8 209 aa5.56□□□□□ -1.52
LINC02397-201ENST00000504409 LINC00052Q96N35 136 aa5.56□□□□□ -1.52
LINC02397-201ENST00000504409 C19orf24Q9BVV8 132 aa5.56□□□□□ -1.52
LINC02397-201ENST00000504409 WDR61Q9GZS3 305 aaKnown RBP5.56□□□□□ -1.52
LINC02397-201ENST00000504409 IL19Q9UHD0 177 aa5.56□□□□□ -1.52
LINC02397-201ENST00000504409 WTIPA6NIX2 430 aaPredicted RBP5.56□□□□□ -1.52
LINC02397-201ENST00000504409 ISLRO14498 428 aa5.56□□□□□ -1.52
LINC02397-201ENST00000504409 GLSO94925 669 aaPredicted RBP5.56□□□□□ -1.52
LINC02397-201ENST00000504409 GUSBP08236 651 aa5.56□□□□□ -1.52
LINC02397-201ENST00000504409 ADRA1AP35348 466 aa5.56□□□□□ -1.52
LINC02397-201ENST00000504409 CNN1P51911 297 aaKnown RBP5.56□□□□□ -1.52
LINC02397-201ENST00000504409 DGKEP52429 567 aa5.56□□□□□ -1.52
LINC02397-201ENST00000504409 ACTR1AP61163 376 aa5.56□□□□□ -1.52
LINC02397-201ENST00000504409 FKBP1BP68106 108 aa5.56□□□□□ -1.52
LINC02397-201ENST00000504409 PMS2P11Q13670 270 aa5.56□□□□□ -1.52
LINC02397-201ENST00000504409 SLC35G1Q2M3R5 365 aa5.56□□□□□ -1.52
LINC02397-201ENST00000504409 RAB6CQ53S08 254 aa5.56□□□□□ -1.52
LINC02397-201ENST00000504409 PLBD1Q6P4A8 553 aa5.56□□□□□ -1.52
LINC02397-201ENST00000504409 RAB6CQ9H0N0 254 aa5.56□□□□□ -1.52
LINC02397-201ENST00000504409 ZBP1Q9H171 429 aa5.56□□□□□ -1.52
LINC02397-201ENST00000504409 NAGKQ9UJ70 344 aa5.56□□□□□ -1.52
LINC02397-201ENST00000504409 TAF1P21675 1872 aa5.56□□□□□ -1.52
LINC02397-201ENST00000504409 TLCD2A6NGC4 264 aa5.56□□□□□ -1.52
LINC02397-201ENST00000504409 SLC17A2O00624 439 aa5.56□□□□□ -1.52
LINC02397-201ENST00000504409 P2RX1P51575 399 aa5.56□□□□□ -1.52
LINC02397-201ENST00000504409 CLRN1P58418 232 aa5.56□□□□□ -1.52
LINC02397-201ENST00000504409 RACK1P63244 317 aaKnown RBP5.56□□□□□ -1.52
LINC02397-201ENST00000504409 SLC25A42Q86VD7 318 aa5.56□□□□□ -1.52
LINC02397-201ENST00000504409 OR52R1Q8NGF1 315 aa5.56□□□□□ -1.52
LINC02397-201ENST00000504409 ALG12Q9BV10 488 aa5.56□□□□□ -1.52
LINC02397-201ENST00000504409 SLC5A6Q9Y289 635 aa5.56□□□□□ -1.52
LINC02397-201ENST00000504409 KLF2Q9Y5W3 355 aaPredicted RBP5.56□□□□□ -1.52
LINC02397-201ENST00000504409 ROBO1Q9Y6N7 1651 aa5.56□□□□□ -1.52
LINC02397-201ENST00000504409 LOC102723971A0A1B0GUV8 181 aa5.56□□□□□ -1.52
LINC02397-201ENST00000504409 G3V3Y1 287 aa5.56□□□□□ -1.52
LINC02397-201ENST00000504409 TAPBPO15533 448 aa5.56□□□□□ -1.52
LINC02397-201ENST00000504409 PITX3O75364 302 aa5.56□□□□□ -1.52
LINC02397-201ENST00000504409 CA11O75493 328 aa5.56□□□□□ -1.52
LINC02397-201ENST00000504409 EIF3GO75821 320 aaKnown RBP eCLIP5.56□□□□□ -1.52
LINC02397-201ENST00000504409 ACTL6AO96019 429 aa5.56□□□□□ -1.52
LINC02397-201ENST00000504409 ACKR3P25106 362 aa5.56□□□□□ -1.52
LINC02397-201ENST00000504409 NKX2-1P43699 371 aaPredicted RBP5.56□□□□□ -1.52
LINC02397-201ENST00000504409 SGSHP51688 502 aa5.56□□□□□ -1.52
LINC02397-201ENST00000504409 ZNF787Q6DD87 383 aa5.56□□□□□ -1.52
LINC02397-201ENST00000504409 ZNF383Q8NA42 475 aa5.56□□□□□ -1.52
LINC02397-201ENST00000504409 GLIS3Q8NEA6 775 aa5.56□□□□□ -1.52
LINC02397-201ENST00000504409 OR6N2Q8NGY6 317 aa5.56□□□□□ -1.52
LINC02397-201ENST00000504409 RXFP4Q8TDU9 374 aa5.56□□□□□ -1.52
LINC02397-201ENST00000504409 PARD6GQ9BYG4 376 aaPredicted RBP5.56□□□□□ -1.52
LINC02397-201ENST00000504409 NKX2-4Q9H2Z4 354 aa5.56□□□□□ -1.52
LINC02397-201ENST00000504409 EHFQ9NZC4 300 aa5.56□□□□□ -1.52
LINC02397-201ENST00000504409 CTBSQ01459 385 aa5.56□□□□□ -1.52
LINC02397-201ENST00000504409 RGMBQ6NW40 437 aa5.56□□□□□ -1.52
LINC02397-201ENST00000504409 JMJD6Q6NYC1 403 aaPredicted RBP5.56□□□□□ -1.52
LINC02397-201ENST00000504409 CLEC1AQ8NC01 280 aa5.56□□□□□ -1.52
LINC02397-201ENST00000504409 PP6455Q8WZ26 134 aa5.56□□□□□ -1.52
LINC02397-201ENST00000504409 ABHD6Q9BV23 337 aa5.56□□□□□ -1.52
LINC02397-201ENST00000504409 SPATC1LQ9H0A9 340 aa5.56□□□□□ -1.52
LINC02397-201ENST00000504409 SAP30LQ9HAJ7 183 aa5.56□□□□□ -1.52
LINC02397-201ENST00000504409 ZFP30Q9Y2G7 519 aa5.56□□□□□ -1.52
LINC02397-201ENST00000504409 LSM5Q9Y4Y9 91 aaKnown RBP5.56□□□□□ -1.52
LINC02397-201ENST00000504409 OR1F1O43749 312 aa5.56□□□□□ -1.52
LINC02397-201ENST00000504409 THY1P04216 161 aa5.56□□□□□ -1.52
LINC02397-201ENST00000504409 MUC1P15941 1255 aaPredicted RBP5.56□□□□□ -1.52
LINC02397-201ENST00000504409 SEC11AP67812 179 aa5.56□□□□□ -1.52
LINC02397-201ENST00000504409 LIPNQ5VXI9 398 aa5.56□□□□□ -1.52
LINC02397-201ENST00000504409 PLXDC2Q6UX71 529 aa5.56□□□□□ -1.52
LINC02397-201ENST00000504409 ADGRA1Q86SQ6 560 aa5.56□□□□□ -1.52
LINC02397-201ENST00000504409 PIM3Q86V86 326 aa5.56□□□□□ -1.52
LINC02397-201ENST00000504409 BOLLQ8N9W6 283 aaKnown RBP5.56□□□□□ -1.52
LINC02397-201ENST00000504409 GHSRQ92847 366 aa5.56□□□□□ -1.52
LINC02397-201ENST00000504409 DAZLQ92904 295 aaKnown RBP5.56□□□□□ -1.52
LINC02397-201ENST00000504409 ZFYVE21Q9BQ24 234 aa5.56□□□□□ -1.52
LINC02397-201ENST00000504409 OPN3Q9H1Y3 402 aaPredicted RBP5.56□□□□□ -1.52
LINC02397-201ENST00000504409 EDDM13A0A1B0GTR0 161 aa5.55□□□□□ -1.52
LINC02397-201ENST00000504409 MAFKO60675 156 aa5.55□□□□□ -1.52
LINC02397-201ENST00000504409 HSBP1O75506 76 aa5.55□□□□□ -1.52
LINC02397-201ENST00000504409 LGALS2P05162 132 aa5.55□□□□□ -1.52
LINC02397-201ENST00000504409 TLE1Q04724 770 aa5.55□□□□□ -1.52
LINC02397-201ENST00000504409 Q5PR19 223 aa5.55□□□□□ -1.52
LINC02397-201ENST00000504409 PRAMEF18Q5VWM3 479 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms