RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 PLPPR5Q32ZL2 321 aa8.78□□□□□ -1
CLIP1-204ENST00000501271 TMEM244Q5VVB8 128 aa8.78□□□□□ -1
CLIP1-204ENST00000501271 B3GNTL1Q67FW5 361 aaPredicted RBP8.78□□□□□ -1
CLIP1-204ENST00000501271 SIGIRRQ6IA17 410 aa8.78□□□□□ -1
CLIP1-204ENST00000501271 GUSBP11Q6P575 273 aa8.78□□□□□ -1
CLIP1-204ENST00000501271 DEGS2Q6QHC5 323 aa8.78□□□□□ -1
CLIP1-204ENST00000501271 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.78□□□□□ -1
CLIP1-204ENST00000501271 SPEM1Q8N4L4 309 aa8.78□□□□□ -1
CLIP1-204ENST00000501271 NKAIN3Q8N8D7 197 aa8.78□□□□□ -1
CLIP1-204ENST00000501271 OR10G3Q8NGC4 313 aa8.78□□□□□ -1
CLIP1-204ENST00000501271 POC1BQ8TC44 478 aa8.78□□□□□ -1
CLIP1-204ENST00000501271 NKD1Q969G9 470 aa8.78□□□□□ -1
CLIP1-204ENST00000501271 FGGYQ96C11 551 aa8.78□□□□□ -1
CLIP1-204ENST00000501271 SLAMF6Q96DU3 332 aa8.78□□□□□ -1
CLIP1-204ENST00000501271 POTEKPQ9BYX7 375 aa8.78□□□□□ -1
CLIP1-204ENST00000501271 C1orf198Q9H425 327 aa8.78□□□□□ -1
CLIP1-204ENST00000501271 NARFLQ9H6Q4 476 aa8.78□□□□□ -1
CLIP1-204ENST00000501271 TMEM185BQ9H7F4 350 aa8.78□□□□□ -1
CLIP1-204ENST00000501271 CNTD2Q9H8S5 307 aa8.78□□□□□ -1
CLIP1-204ENST00000501271 SCPEP1Q9HB40 452 aa8.78□□□□□ -1
CLIP1-204ENST00000501271 PPP4R1LQ9P1A2 415 aa8.78□□□□□ -1
CLIP1-204ENST00000501271 KLHL13Q9P2N7 655 aa8.78□□□□□ -1
CLIP1-204ENST00000501271 FXYD6-FXYD2A0A087WZ82 144 aa8.78□□□□□ -1
CLIP1-204ENST00000501271 A0A1W2PNV4 684 aa8.78□□□□□ -1
CLIP1-204ENST00000501271 TMEM82A0PJX8 343 aa8.78□□□□□ -1
CLIP1-204ENST00000501271 MELTFP08582 738 aa8.78□□□□□ -1
CLIP1-204ENST00000501271 ZNF41P51814 821 aaPredicted RBP8.78□□□□□ -1
CLIP1-204ENST00000501271 RAB14P61106 215 aa8.78□□□□□ -1
CLIP1-204ENST00000501271 FOXK1P85037 733 aa8.78□□□□□ -1
CLIP1-204ENST00000501271 HLXQ14774 488 aaPredicted RBP8.78□□□□□ -1
CLIP1-204ENST00000501271 FAM69BQ5VUD6 431 aa8.78□□□□□ -1
CLIP1-204ENST00000501271 LCN10Q6JVE6 187 aa8.78□□□□□ -1
CLIP1-204ENST00000501271 TSSK4Q6SA08 328 aa8.78□□□□□ -1
CLIP1-204ENST00000501271 ZNF813Q6ZN06 617 aa8.78□□□□□ -1
CLIP1-204ENST00000501271 CFAP77Q6ZQR2 320 aa8.78□□□□□ -1
CLIP1-204ENST00000501271 TMED4Q7Z7H5 227 aa8.78□□□□□ -1
CLIP1-204ENST00000501271 OR52N4Q8NGI2 321 aa8.78□□□□□ -1
CLIP1-204ENST00000501271 ADAT3Q96EY9 351 aaPredicted RBP8.78□□□□□ -1
CLIP1-204ENST00000501271 WBP1Q96G27 269 aa8.78□□□□□ -1
CLIP1-204ENST00000501271 FXYD6Q9H0Q3 95 aa8.78□□□□□ -1
CLIP1-204ENST00000501271 FANCFQ9NPI8 374 aa8.78□□□□□ -1
CLIP1-204ENST00000501271 CYB5R1Q9UHQ9 305 aa8.78□□□□□ -1
CLIP1-204ENST00000501271 GDF2Q9UK05 429 aaPredicted RBP8.78□□□□□ -1
CLIP1-204ENST00000501271 B3GALT5Q9Y2C3 310 aa8.78□□□□□ -1
CLIP1-204ENST00000501271 A0A0A6YYH2 397 aa8.77□□□□□ -1.01
CLIP1-204ENST00000501271 A0A1W2PQM1 296 aa8.77□□□□□ -1.01
CLIP1-204ENST00000501271 CPED1A4D0V7 1026 aa8.77□□□□□ -1.01
CLIP1-204ENST00000501271 A6NJ64 397 aa8.77□□□□□ -1.01
CLIP1-204ENST00000501271 ZSCAN5BA6NJL1 495 aa8.77□□□□□ -1.01
CLIP1-204ENST00000501271 HMSDA8MTL9 139 aa8.77□□□□□ -1.01
CLIP1-204ENST00000501271 K7ESF4 209 aa8.77□□□□□ -1.01
CLIP1-204ENST00000501271 TOX3O15405 576 aaPredicted RBP8.77□□□□□ -1.01
CLIP1-204ENST00000501271 SCO1O75880 301 aa8.77□□□□□ -1.01
CLIP1-204ENST00000501271 OR2J2O76002 312 aa8.77□□□□□ -1.01
CLIP1-204ENST00000501271 CYB5AP00167 134 aa8.77□□□□□ -1.01
CLIP1-204ENST00000501271 CD74P04233 296 aa8.77□□□□□ -1.01
CLIP1-204ENST00000501271 OR4E1P0C645 316 aa8.77□□□□□ -1.01
CLIP1-204ENST00000501271 ZNF28P17035 718 aa8.77□□□□□ -1.01
CLIP1-204ENST00000501271 C4BPBP20851 252 aa8.77□□□□□ -1.01
CLIP1-204ENST00000501271 S100A11P31949 105 aa8.77□□□□□ -1.01
CLIP1-204ENST00000501271 EMP2P54851 167 aa8.77□□□□□ -1.01
CLIP1-204ENST00000501271 ARPC4P59998 168 aa8.77□□□□□ -1.01
CLIP1-204ENST00000501271 ACY1Q03154 408 aa8.77□□□□□ -1.01
CLIP1-204ENST00000501271 UNC119Q13432 240 aa8.77□□□□□ -1.01
CLIP1-204ENST00000501271 WDR45BQ5MNZ6 344 aa8.77□□□□□ -1.01
CLIP1-204ENST00000501271 ZNF385CQ66K41 422 aaPredicted RBP8.77□□□□□ -1.01
CLIP1-204ENST00000501271 C11orf88Q6PI97 169 aa8.77□□□□□ -1.01
CLIP1-204ENST00000501271 TMUB2Q71RG4 321 aa8.77□□□□□ -1.01
CLIP1-204ENST00000501271 PAQR4Q8N4S7 273 aaPredicted RBP8.77□□□□□ -1.01
CLIP1-204ENST00000501271 OR10H5Q8NGA6 315 aa8.77□□□□□ -1.01
CLIP1-204ENST00000501271 OR4S1Q8NGB4 309 aa8.77□□□□□ -1.01
CLIP1-204ENST00000501271 OR1J2Q8NGS2 313 aa8.77□□□□□ -1.01
CLIP1-204ENST00000501271 SUN5Q8TC36 379 aa8.77□□□□□ -1.01
CLIP1-204ENST00000501271 CMBLQ96DG6 245 aa8.77□□□□□ -1.01
CLIP1-204ENST00000501271 MRPL13Q9BYD1 178 aaKnown RBP8.77□□□□□ -1.01
CLIP1-204ENST00000501271 B3GNT4Q9C0J1 378 aa8.77□□□□□ -1.01
CLIP1-204ENST00000501271 PBOV1Q9GZY1 135 aa8.77□□□□□ -1.01
CLIP1-204ENST00000501271 ALX4Q9H161 411 aaPredicted RBP8.77□□□□□ -1.01
CLIP1-204ENST00000501271 PTGES2Q9H7Z7 377 aa8.77□□□□□ -1.01
CLIP1-204ENST00000501271 FARSAQ9Y285 508 aaKnown RBP8.77□□□□□ -1.01
CLIP1-204ENST00000501271 RPH3AQ9Y2J0 694 aaPredicted RBP8.77□□□□□ -1.01
CLIP1-204ENST00000501271 WIF1Q9Y5W5 379 aa8.77□□□□□ -1.01
CLIP1-204ENST00000501271 DMDP11532 3685 aa8.76□□□□□ -1.01
CLIP1-204ENST00000501271 LY6G6EA0A0G2JKS1 128 aa8.76□□□□□ -1.01
CLIP1-204ENST00000501271 A0A1W2PNR3 127 aa8.76□□□□□ -1.01
CLIP1-204ENST00000501271 ZNF736B4DX44 427 aaPredicted RBP8.76□□□□□ -1.01
CLIP1-204ENST00000501271 ZNF814B7Z6K7 855 aa8.76□□□□□ -1.01
CLIP1-204ENST00000501271 H3BUI4 141 aa8.76□□□□□ -1.01
CLIP1-204ENST00000501271 RAB27BO00194 218 aa8.76□□□□□ -1.01
CLIP1-204ENST00000501271 BDKRB2P30411 391 aa8.76□□□□□ -1.01
CLIP1-204ENST00000501271 GNALP38405 381 aa8.76□□□□□ -1.01
CLIP1-204ENST00000501271 P2RY4P51582 365 aa8.76□□□□□ -1.01
CLIP1-204ENST00000501271 DCDP81605 110 aaKnown RBP8.76□□□□□ -1.01
CLIP1-204ENST00000501271 MPPED2Q15777 294 aa8.76□□□□□ -1.01
CLIP1-204ENST00000501271 SLC25A53Q5H9E4 307 aa8.76□□□□□ -1.01
CLIP1-204ENST00000501271 LY6G6FQ5SQ64 297 aa8.76□□□□□ -1.01
CLIP1-204ENST00000501271 ATPAF1Q5TC12 328 aaPredicted RBP8.76□□□□□ -1.01
CLIP1-204ENST00000501271 C17orf107Q6ZR85 190 aa8.76□□□□□ -1.01
CLIP1-204ENST00000501271 CPEB2Q7Z5Q1 589 aaKnown RBP8.76□□□□□ -1.01
CLIP1-204ENST00000501271 CDH26Q8IXH8 852 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms