RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 CYB5R3P00387 301 aaPredicted RBP1.41□□□□□ -2.18
SMC4-227ENST00000497984 IGLV3-25P01717 112 aa1.41□□□□□ -2.18
SMC4-227ENST00000497984 NSG1P42857 185 aa1.41□□□□□ -2.18
SMC4-227ENST00000497984 PRLHRP49683 370 aa1.41□□□□□ -2.18
SMC4-227ENST00000497984 TPMTP51580 245 aa1.41□□□□□ -2.18
SMC4-227ENST00000497984 RND2P52198 227 aa1.41□□□□□ -2.18
SMC4-227ENST00000497984 CDKN2DP55273 166 aa1.41□□□□□ -2.18
SMC4-227ENST00000497984 GFERP55789 205 aa1.41□□□□□ -2.18
SMC4-227ENST00000497984 ZNF235Q14590 738 aa1.41□□□□□ -2.18
SMC4-227ENST00000497984 C16orf47Q6ZP98 133 aaPredicted RBP1.41□□□□□ -2.18
SMC4-227ENST00000497984 ZNF101Q8IZC7 436 aa1.41□□□□□ -2.18
SMC4-227ENST00000497984 ZNF680Q8NEM1 530 aa1.41□□□□□ -2.18
SMC4-227ENST00000497984 ZNF502Q8TBZ5 544 aa1.41□□□□□ -2.18
SMC4-227ENST00000497984 COL21A1Q96P44 957 aa1.41□□□□□ -2.18
SMC4-227ENST00000497984 ZNF317Q96PQ6 595 aaPredicted RBP1.41□□□□□ -2.18
SMC4-227ENST00000497984 RBBP8Q99708 897 aa1.41□□□□□ -2.18
SMC4-227ENST00000497984 CRACR2AQ9BSW2 395 aa1.41□□□□□ -2.18
SMC4-227ENST00000497984 C1orf50Q9BV19 199 aa1.41□□□□□ -2.18
SMC4-227ENST00000497984 ANGPTL4Q9BY76 406 aa1.41□□□□□ -2.18
SMC4-227ENST00000497984 ILKAPQ9H0C8 392 aaPredicted RBP1.41□□□□□ -2.18
SMC4-227ENST00000497984 C21orf62Q9NYP8 219 aa1.41□□□□□ -2.18
SMC4-227ENST00000497984 CAMTA1Q9Y6Y1 1673 aa1.41□□□□□ -2.18
SMC4-227ENST00000497984 LYRM9A8MSI8 78 aa1.4□□□□□ -2.19
SMC4-227ENST00000497984 CDC40O60508 579 aaKnown RBP eCLIP1.4□□□□□ -2.19
SMC4-227ENST00000497984 EIF1BO60739 113 aaKnown RBP1.4□□□□□ -2.19
SMC4-227ENST00000497984 H6PDO95479 791 aa1.4□□□□□ -2.19
SMC4-227ENST00000497984 PAHP00439 452 aa1.4□□□□□ -2.19
SMC4-227ENST00000497984 LHBP01229 141 aa1.4□□□□□ -2.19
SMC4-227ENST00000497984 IGLV6-57P01721 117 aa1.4□□□□□ -2.19
SMC4-227ENST00000497984 ATF6P18850 670 aa1.4□□□□□ -2.19
SMC4-227ENST00000497984 LOXP28300 417 aaPredicted RBP1.4□□□□□ -2.19
SMC4-227ENST00000497984 EIF1P41567 113 aaKnown RBP1.4□□□□□ -2.19
SMC4-227ENST00000497984 ACTR1AP61163 376 aa1.4□□□□□ -2.19
SMC4-227ENST00000497984 MAD2L1BPQ15013 274 aaPredicted RBP1.4□□□□□ -2.19
SMC4-227ENST00000497984 ZNF726P1Q15940 193 aa1.4□□□□□ -2.19
SMC4-227ENST00000497984 VPS26BQ4G0F5 336 aa1.4□□□□□ -2.19
SMC4-227ENST00000497984 YIF1BQ5BJH7 314 aa1.4□□□□□ -2.19
SMC4-227ENST00000497984 TEX30Q5JUR7 227 aa1.4□□□□□ -2.19
SMC4-227ENST00000497984 GUSBP11Q6P575 273 aa1.4□□□□□ -2.19
SMC4-227ENST00000497984 Q6ZSR3 168 aa1.4□□□□□ -2.19
SMC4-227ENST00000497984 NPWQ8N729 165 aa1.4□□□□□ -2.19
SMC4-227ENST00000497984 EIF1ADQ8N9N8 165 aaKnown RBP1.4□□□□□ -2.19
SMC4-227ENST00000497984 OR10G6Q8NH81 332 aa1.4□□□□□ -2.19
SMC4-227ENST00000497984 RAB3IL1Q8TBN0 382 aa1.4□□□□□ -2.19
SMC4-227ENST00000497984 SLC7A13Q8TCU3 470 aa1.4□□□□□ -2.19
SMC4-227ENST00000497984 TMEM230Q96A57 120 aa1.4□□□□□ -2.19
SMC4-227ENST00000497984 TUBGCP3Q96CW5 907 aa1.4□□□□□ -2.19
SMC4-227ENST00000497984 CCDC126Q96EE4 140 aa1.4□□□□□ -2.19
SMC4-227ENST00000497984 ZBTB18Q99592 522 aa1.4□□□□□ -2.19
SMC4-227ENST00000497984 ATP5SQ99766 215 aa1.4□□□□□ -2.19
SMC4-227ENST00000497984 MICU1Q9BPX6 476 aa1.4□□□□□ -2.19
SMC4-227ENST00000497984 GGTLC1Q9BX51 225 aa1.4□□□□□ -2.19
SMC4-227ENST00000497984 FGF20Q9NP95 211 aaPredicted RBP1.4□□□□□ -2.19
SMC4-227ENST00000497984 USP47Q96K76 1375 aa1.39□□□□□ -2.19
SMC4-227ENST00000497984 IGHV3-49A0A0A0MS15 119 aa1.39□□□□□ -2.19
SMC4-227ENST00000497984 A0A1B0GUH1 482 aa1.39□□□□□ -2.19
SMC4-227ENST00000497984 A0A1W2PNN7 141 aa1.39□□□□□ -2.19
SMC4-227ENST00000497984 KRBOX1C9JBD0 128 aa1.39□□□□□ -2.19
SMC4-227ENST00000497984 CXCL11O14625 94 aa1.39□□□□□ -2.19
SMC4-227ENST00000497984 EIF4E2O60573 245 aaKnown RBP1.39□□□□□ -2.19
SMC4-227ENST00000497984 GLSO94925 669 aaPredicted RBP1.39□□□□□ -2.19
SMC4-227ENST00000497984 NDUFB10O96000 172 aa1.39□□□□□ -2.19
SMC4-227ENST00000497984 ASGR1P07306 291 aa1.39□□□□□ -2.19
SMC4-227ENST00000497984 MPV17P39210 176 aa1.39□□□□□ -2.19
SMC4-227ENST00000497984 PRPHP41219 470 aa1.39□□□□□ -2.19
SMC4-227ENST00000497984 TNNT2P45379 298 aaPredicted RBP1.39□□□□□ -2.19
SMC4-227ENST00000497984 IDH2P48735 452 aaKnown RBP1.39□□□□□ -2.19
SMC4-227ENST00000497984 RBX1P62877 108 aa1.39□□□□□ -2.19
SMC4-227ENST00000497984 PPIDQ08752 370 aaKnown RBP1.39□□□□□ -2.19
SMC4-227ENST00000497984 SOHLH1Q5JUK2 328 aa1.39□□□□□ -2.19
SMC4-227ENST00000497984 CENPPQ6IPU0 288 aa1.39□□□□□ -2.19
SMC4-227ENST00000497984 HCP5Q6MZN7 132 aa1.39□□□□□ -2.19
SMC4-227ENST00000497984 CASC1Q6TDU7 716 aa1.39□□□□□ -2.19
SMC4-227ENST00000497984 CDR2LQ86X02 465 aaPredicted RBP1.39□□□□□ -2.19
SMC4-227ENST00000497984 CHST4Q8NCG5 386 aa1.39□□□□□ -2.19
SMC4-227ENST00000497984 OR10AD1Q8NGE0 317 aa1.39□□□□□ -2.19
SMC4-227ENST00000497984 DUS3LQ96G46 650 aaKnown RBP1.39□□□□□ -2.19
SMC4-227ENST00000497984 RHBDL2Q9NX52 303 aa1.39□□□□□ -2.19
SMC4-227ENST00000497984 LGALS13Q9UHV8 139 aa1.39□□□□□ -2.19
SMC4-227ENST00000497984 STARD10Q9Y365 291 aa1.39□□□□□ -2.19
SMC4-227ENST00000497984 TENM1Q9UKZ4 2725 aa1.38□□□□□ -2.19
SMC4-227ENST00000497984 ARHGEF35A5YM69 484 aa1.38□□□□□ -2.19
SMC4-227ENST00000497984 OR5H1A6NKK0 313 aa1.38□□□□□ -2.19
SMC4-227ENST00000497984 L7N2F9 121 aa1.38□□□□□ -2.19
SMC4-227ENST00000497984 PLIN3O60664 434 aa1.38□□□□□ -2.19
SMC4-227ENST00000497984 SERPINA5P05154 406 aa1.38□□□□□ -2.19
SMC4-227ENST00000497984 NAA10P41227 235 aaPredicted RBP1.38□□□□□ -2.19
SMC4-227ENST00000497984 RCAN2Q14206 197 aa1.38□□□□□ -2.19
SMC4-227ENST00000497984 KRTAP13-4Q3LI77 160 aa1.38□□□□□ -2.19
SMC4-227ENST00000497984 ZFAND6Q6FIF0 208 aa1.38□□□□□ -2.19
SMC4-227ENST00000497984 TMEM136Q6ZRR5 245 aa1.38□□□□□ -2.19
SMC4-227ENST00000497984 RGS9BPQ6ZS82 235 aa1.38□□□□□ -2.19
SMC4-227ENST00000497984 NIPA1Q7RTP0 329 aa1.38□□□□□ -2.19
SMC4-227ENST00000497984 NKAIN4Q8IVV8 208 aa1.38□□□□□ -2.19
SMC4-227ENST00000497984 TBC1D21Q8IYX1 336 aa1.38□□□□□ -2.19
SMC4-227ENST00000497984 C11orf72Q8NBR9 251 aa1.38□□□□□ -2.19
SMC4-227ENST00000497984 NT5C3BQ969T7 300 aa1.38□□□□□ -2.19
SMC4-227ENST00000497984 OR5B12Q96R08 314 aa1.38□□□□□ -2.19
SMC4-227ENST00000497984 RHOXF2Q9BQY4 288 aa1.38□□□□□ -2.19
SMC4-227ENST00000497984 SHANK2-AS3Q9BTD1 123 aa1.38□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms