RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 CALHM3Q86XJ0 350 aa1.85□□□□□ -2.11
PSPC1-205ENST00000497722 OR11H7Q8NGC8 314 aa1.85□□□□□ -2.11
PSPC1-205ENST00000497722 LYPD6BQ8NI32 183 aa1.85□□□□□ -2.11
PSPC1-205ENST00000497722 LINC01560Q8TB33 94 aa1.85□□□□□ -2.11
PSPC1-205ENST00000497722 RAB3IL1Q8TBN0 382 aa1.85□□□□□ -2.11
PSPC1-205ENST00000497722 RTN4IP1Q8WWV3 396 aaPredicted RBP1.85□□□□□ -2.11
PSPC1-205ENST00000497722 ELMO1Q92556 727 aa1.85□□□□□ -2.11
PSPC1-205ENST00000497722 PTX4Q96A99 478 aa1.85□□□□□ -2.11
PSPC1-205ENST00000497722 ZNF488Q96MN9 340 aa1.85□□□□□ -2.11
PSPC1-205ENST00000497722 RTBDNQ9BSG5 229 aaPredicted RBP1.85□□□□□ -2.11
PSPC1-205ENST00000497722 SLC38A10Q9HBR0 1119 aa1.85□□□□□ -2.11
PSPC1-205ENST00000497722 ZNF160Q9HCG1 818 aa1.85□□□□□ -2.11
PSPC1-205ENST00000497722 MYOZ1Q9NP98 299 aaPredicted RBP1.85□□□□□ -2.11
PSPC1-205ENST00000497722 NMRK1Q9NWW6 199 aa1.85□□□□□ -2.11
PSPC1-205ENST00000497722 DOCK9Q9BZ29 2069 aa1.85□□□□□ -2.11
PSPC1-205ENST00000497722 KIF26AQ9ULI4 1882 aaPredicted RBP1.84□□□□□ -2.11
PSPC1-205ENST00000497722 IGHV1OR15-9A0A0B4J2B8 117 aa1.84□□□□□ -2.11
PSPC1-205ENST00000497722 A0A1B0GW55 424 aa1.84□□□□□ -2.11
PSPC1-205ENST00000497722 CTAGE15A4D2H0 777 aa1.84□□□□□ -2.11
PSPC1-205ENST00000497722 CCDC169A6NNP5 214 aa1.84□□□□□ -2.11
PSPC1-205ENST00000497722 ZNF716A6NP11 495 aa1.84□□□□□ -2.11
PSPC1-205ENST00000497722 SMKR1H3BMG3 65 aa1.84□□□□□ -2.11
PSPC1-205ENST00000497722 NDUFAB1O14561 156 aa1.84□□□□□ -2.11
PSPC1-205ENST00000497722 BPY2O14599 106 aa1.84□□□□□ -2.11
PSPC1-205ENST00000497722 RAD51CO43502 376 aa1.84□□□□□ -2.11
PSPC1-205ENST00000497722 EIF1BO60739 113 aaKnown RBP1.84□□□□□ -2.11
PSPC1-205ENST00000497722 HUS1O60921 280 aa1.84□□□□□ -2.11
PSPC1-205ENST00000497722 CCNE2O96020 404 aa1.84□□□□□ -2.11
PSPC1-205ENST00000497722 HLA-DQB1P01920 261 aa1.84□□□□□ -2.11
PSPC1-205ENST00000497722 ZNF735P0CB33 412 aa1.84□□□□□ -2.11
PSPC1-205ENST00000497722 DUX4L2P0CJ85 424 aa1.84□□□□□ -2.11
PSPC1-205ENST00000497722 DUX4L3P0CJ86 424 aa1.84□□□□□ -2.11
PSPC1-205ENST00000497722 DUX4L5P0CJ88 424 aa1.84□□□□□ -2.11
PSPC1-205ENST00000497722 DUX4L6P0CJ89 424 aa1.84□□□□□ -2.11
PSPC1-205ENST00000497722 DUX4L7P0CJ90 424 aa1.84□□□□□ -2.11
PSPC1-205ENST00000497722 EIF1P41567 113 aaKnown RBP1.84□□□□□ -2.11
PSPC1-205ENST00000497722 RBM34P42696 430 aaKnown RBP1.84□□□□□ -2.11
PSPC1-205ENST00000497722 SYKP43405 635 aa1.84□□□□□ -2.11
PSPC1-205ENST00000497722 UQCRFS1P47985 274 aa1.84□□□□□ -2.11
PSPC1-205ENST00000497722 CXCL12P48061 93 aa1.84□□□□□ -2.11
PSPC1-205ENST00000497722 C21orf59P57076 290 aa1.84□□□□□ -2.11
PSPC1-205ENST00000497722 CDK5Q00535 292 aa1.84□□□□□ -2.11
PSPC1-205ENST00000497722 DGCR6Q14129 220 aa1.84□□□□□ -2.11
PSPC1-205ENST00000497722 TRAM2Q15035 370 aa1.84□□□□□ -2.11
PSPC1-205ENST00000497722 CHRFAM7AQ494W8 412 aa1.84□□□□□ -2.11
PSPC1-205ENST00000497722 DNLZQ5SXM8 178 aa1.84□□□□□ -2.11
PSPC1-205ENST00000497722 TPTE2P1Q5T6R2 138 aa1.84□□□□□ -2.11
PSPC1-205ENST00000497722 KPRPQ5T749 579 aaPredicted RBP1.84□□□□□ -2.11
PSPC1-205ENST00000497722 UBE2UQ5VVX9 321 aa1.84□□□□□ -2.11
PSPC1-205ENST00000497722 Q5W150 140 aa1.84□□□□□ -2.11
PSPC1-205ENST00000497722 TWF2Q6IBS0 349 aaKnown RBP1.84□□□□□ -2.11
PSPC1-205ENST00000497722 ADNP2Q6IQ32 1131 aa1.84□□□□□ -2.11
PSPC1-205ENST00000497722 NTM-AS1Q6ZSK4 140 aa1.84□□□□□ -2.11
PSPC1-205ENST00000497722 EIF3MQ7L2H7 374 aaKnown RBP1.84□□□□□ -2.11
PSPC1-205ENST00000497722 CTAGE6Q86UF2 777 aa1.84□□□□□ -2.11
PSPC1-205ENST00000497722 CDKL3Q8IVW4 592 aaPredicted RBP1.84□□□□□ -2.11
PSPC1-205ENST00000497722 FAM71AQ8IYT1 594 aa1.84□□□□□ -2.11
PSPC1-205ENST00000497722 TTC29Q8NA56 475 aaPredicted RBP1.84□□□□□ -2.11
PSPC1-205ENST00000497722 OR6Q1Q8NGQ2 317 aa1.84□□□□□ -2.11
PSPC1-205ENST00000497722 ACMSDQ8TDX5 336 aa1.84□□□□□ -2.11
PSPC1-205ENST00000497722 MRGPRFQ96AM1 343 aa1.84□□□□□ -2.11
PSPC1-205ENST00000497722 MCUR1Q96AQ8 359 aa1.84□□□□□ -2.11
PSPC1-205ENST00000497722 RNF5Q99942 180 aa1.84□□□□□ -2.11
PSPC1-205ENST00000497722 LZTS2Q9BRK4 669 aa1.84□□□□□ -2.11
PSPC1-205ENST00000497722 RSG1Q9BU20 258 aa1.84□□□□□ -2.11
PSPC1-205ENST00000497722 BEX1Q9HBH7 125 aa1.84□□□□□ -2.11
PSPC1-205ENST00000497722 MRM3Q9HC36 420 aaKnown RBP1.84□□□□□ -2.11
PSPC1-205ENST00000497722 DUX4Q9UBX2 424 aa1.84□□□□□ -2.11
PSPC1-205ENST00000497722 RRP15Q9Y3B9 282 aaKnown RBP1.84□□□□□ -2.11
PSPC1-205ENST00000497722 NINLQ9Y2I6 1382 aa1.84□□□□□ -2.12
PSPC1-205ENST00000497722 ADAMTS13Q76LX8 1427 aa1.83□□□□□ -2.12
PSPC1-205ENST00000497722 TRBV11-1A0A0K0K1C0 115 aa1.83□□□□□ -2.12
PSPC1-205ENST00000497722 SPRR5A0A1B0GTR4 108 aa1.83□□□□□ -2.12
PSPC1-205ENST00000497722 GABRR3A8MPY1 467 aa1.83□□□□□ -2.12
PSPC1-205ENST00000497722 NDUFC2-KCTD14E9PQ53 114 aa1.83□□□□□ -2.12
PSPC1-205ENST00000497722 RPL36A-HNRNPH2H7BZ11 118 aa1.83□□□□□ -2.12
PSPC1-205ENST00000497722 EIF3HO15372 352 aaKnown RBP eCLIP1.83□□□□□ -2.12
PSPC1-205ENST00000497722 ERLIN1O75477 346 aa1.83□□□□□ -2.12
PSPC1-205ENST00000497722 REM1O75628 298 aa1.83□□□□□ -2.12
PSPC1-205ENST00000497722 LSM8O95777 96 aaKnown RBP1.83□□□□□ -2.12
PSPC1-205ENST00000497722 AGTP01019 485 aa1.83□□□□□ -2.12
PSPC1-205ENST00000497722 KRT14P02533 472 aa1.83□□□□□ -2.12
PSPC1-205ENST00000497722 DCNP07585 359 aaKnown RBP1.83□□□□□ -2.12
PSPC1-205ENST00000497722 OR8U9P0C7N5 309 aa1.83□□□□□ -2.12
PSPC1-205ENST00000497722 ME2P23368 584 aa1.83□□□□□ -2.12
PSPC1-205ENST00000497722 SYNJ2BPP57105 145 aa1.83□□□□□ -2.12
PSPC1-205ENST00000497722 TAS2R31P59538 309 aa1.83□□□□□ -2.12
PSPC1-205ENST00000497722 TAS2R46P59540 309 aa1.83□□□□□ -2.12
PSPC1-205ENST00000497722 RPS23P62266 143 aaKnown RBP1.83□□□□□ -2.12
PSPC1-205ENST00000497722 CRADDP78560 199 aa1.83□□□□□ -2.12
PSPC1-205ENST00000497722 CYP24A1Q07973 514 aa1.83□□□□□ -2.12
PSPC1-205ENST00000497722 CDC20Q12834 499 aa1.83□□□□□ -2.12
PSPC1-205ENST00000497722 SRSF5Q13243 272 aaKnown RBP1.83□□□□□ -2.12
PSPC1-205ENST00000497722 AVPI1Q5T686 147 aa1.83□□□□□ -2.12
PSPC1-205ENST00000497722 Q6ZSR3 168 aa1.83□□□□□ -2.12
PSPC1-205ENST00000497722 LUZP2Q86TE4 346 aa1.83□□□□□ -2.12
PSPC1-205ENST00000497722 MYOCDQ8IZQ8 938 aa1.83□□□□□ -2.12
PSPC1-205ENST00000497722 NECAP1Q8NC96 275 aa1.83□□□□□ -2.12
PSPC1-205ENST00000497722 OR52E2Q8NGJ4 325 aa1.83□□□□□ -2.12
PSPC1-205ENST00000497722 NUBPLQ8TB37 319 aa1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms