RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 COL4A3Q01955 1670 aa11.77□□□□□ -0.53
GAPVD1-220ENST00000497580 SCN10AQ9Y5Y9 1956 aa11.77□□□□□ -0.53
GAPVD1-220ENST00000497580 A0A0B4J2E0 115 aa11.77□□□□□ -0.53
GAPVD1-220ENST00000497580 A0A1B0GX12 115 aa11.77□□□□□ -0.53
GAPVD1-220ENST00000497580 HOXC4P09017 264 aaPredicted RBP11.77□□□□□ -0.53
GAPVD1-220ENST00000497580 CAMLGP49069 296 aa11.77□□□□□ -0.53
GAPVD1-220ENST00000497580 NAAAQ02083 359 aa11.77□□□□□ -0.53
GAPVD1-220ENST00000497580 FAM174AQ8TBP5 190 aa11.77□□□□□ -0.53
GAPVD1-220ENST00000497580 SAT2Q96F10 170 aaPredicted RBP11.77□□□□□ -0.53
GAPVD1-220ENST00000497580 SMIM8Q96KF7 97 aa11.77□□□□□ -0.53
GAPVD1-220ENST00000497580 TEX101Q9BY14 249 aa11.77□□□□□ -0.53
GAPVD1-220ENST00000497580 CHST5Q9GZS9 411 aa11.77□□□□□ -0.53
GAPVD1-220ENST00000497580 PCBD2Q9H0N5 130 aa11.77□□□□□ -0.53
GAPVD1-220ENST00000497580 SLC2A4RGQ9NR83 387 aa11.77□□□□□ -0.53
GAPVD1-220ENST00000497580 POLE3Q9NRF9 147 aa11.77□□□□□ -0.53
GAPVD1-220ENST00000497580 SERTAD3Q9UJW9 196 aa11.77□□□□□ -0.53
GAPVD1-220ENST00000497580 CYTIPO60759 359 aa11.76□□□□□ -0.53
GAPVD1-220ENST00000497580 DNASE1L1P49184 302 aa11.76□□□□□ -0.53
GAPVD1-220ENST00000497580 NKX6-1P78426 367 aaPredicted RBP11.76□□□□□ -0.53
GAPVD1-220ENST00000497580 TMEM35AQ53FP2 167 aa11.76□□□□□ -0.53
GAPVD1-220ENST00000497580 RTN4RL2Q86UN3 420 aa11.76□□□□□ -0.53
GAPVD1-220ENST00000497580 PRSS35Q8N3Z0 413 aa11.76□□□□□ -0.53
GAPVD1-220ENST00000497580 CXorf40AQ8TE69 158 aa11.76□□□□□ -0.53
GAPVD1-220ENST00000497580 ZNF558Q96NG5 402 aa11.76□□□□□ -0.53
GAPVD1-220ENST00000497580 TRBV5-5A0A0J9YX44 114 aa11.76□□□□□ -0.53
GAPVD1-220ENST00000497580 EFSO43281 561 aa11.76□□□□□ -0.53
GAPVD1-220ENST00000497580 AGR2O95994 175 aa11.76□□□□□ -0.53
GAPVD1-220ENST00000497580 THBS1P07996 1170 aa11.76□□□□□ -0.53
GAPVD1-220ENST00000497580 FCRL6Q6DN72 434 aa11.76□□□□□ -0.53
GAPVD1-220ENST00000497580 SLC25A44Q96H78 314 aaPredicted RBP11.76□□□□□ -0.53
GAPVD1-220ENST00000497580 S100A13Q99584 98 aa11.76□□□□□ -0.53
GAPVD1-220ENST00000497580 LSM5Q9Y4Y9 91 aaKnown RBP11.76□□□□□ -0.53
GAPVD1-220ENST00000497580 TGM5O43548 720 aa11.76□□□□□ -0.53
GAPVD1-220ENST00000497580 F10P00742 488 aa11.76□□□□□ -0.53
GAPVD1-220ENST00000497580 RPLP2P05387 115 aaKnown RBP11.76□□□□□ -0.53
GAPVD1-220ENST00000497580 SPARCP09486 303 aa11.76□□□□□ -0.53
GAPVD1-220ENST00000497580 GIMD1P0DJR0 217 aa11.76□□□□□ -0.53
GAPVD1-220ENST00000497580 ACRP10323 421 aa11.76□□□□□ -0.53
GAPVD1-220ENST00000497580 TACR3P29371 465 aa11.76□□□□□ -0.53
GAPVD1-220ENST00000497580 GJA4P35212 333 aa11.76□□□□□ -0.53
GAPVD1-220ENST00000497580 SPCS3P61009 180 aa11.76□□□□□ -0.53
GAPVD1-220ENST00000497580 OR8G1Q15617 311 aa11.76□□□□□ -0.53
GAPVD1-220ENST00000497580 MEP1BQ16820 701 aa11.76□□□□□ -0.53
GAPVD1-220ENST00000497580 ITPRIPL2Q3MIP1 535 aa11.76□□□□□ -0.53
GAPVD1-220ENST00000497580 OR1J1Q8NGS3 322 aa11.76□□□□□ -0.53
GAPVD1-220ENST00000497580 OR2A1Q8NGT9 310 aa11.76□□□□□ -0.53
GAPVD1-220ENST00000497580 SLC39A7Q92504 469 aa11.76□□□□□ -0.53
GAPVD1-220ENST00000497580 MR1Q95460 341 aa11.76□□□□□ -0.53
GAPVD1-220ENST00000497580 CPNE4Q96A23 557 aaPredicted RBP11.76□□□□□ -0.53
GAPVD1-220ENST00000497580 RNF166Q96A37 237 aaPredicted RBP11.76□□□□□ -0.53
GAPVD1-220ENST00000497580 RAB7BQ96AH8 199 aa11.76□□□□□ -0.53
GAPVD1-220ENST00000497580 TMEM68Q96MH6 324 aa11.76□□□□□ -0.53
GAPVD1-220ENST00000497580 GDF2Q9UK05 429 aaPredicted RBP11.76□□□□□ -0.53
GAPVD1-220ENST00000497580 MRPS18BQ9Y676 258 aaKnown RBP11.76□□□□□ -0.53
GAPVD1-220ENST00000497580 TMEM212A6NML5 194 aa11.75□□□□□ -0.53
GAPVD1-220ENST00000497580 HIST1H1BP16401 226 aaKnown RBP11.75□□□□□ -0.53
GAPVD1-220ENST00000497580 GNB3P16520 340 aa11.75□□□□□ -0.53
GAPVD1-220ENST00000497580 EIF5AP63241 154 aaKnown RBP11.75□□□□□ -0.53
GAPVD1-220ENST00000497580 GGTLC2Q14390 218 aa11.75□□□□□ -0.53
GAPVD1-220ENST00000497580 LINC01590Q5TEZ4 76 aa11.75□□□□□ -0.53
GAPVD1-220ENST00000497580 SLC16A9Q7RTY1 509 aa11.75□□□□□ -0.53
GAPVD1-220ENST00000497580 PARPBPQ9NWS1 579 aa11.75□□□□□ -0.53
GAPVD1-220ENST00000497580 DBX1A6NMT0 343 aa11.75□□□□□ -0.53
GAPVD1-220ENST00000497580 PRAMEF26H0Y7S4 382 aa11.75□□□□□ -0.53
GAPVD1-220ENST00000497580 PRKNO60260 465 aaPredicted RBP11.75□□□□□ -0.53
GAPVD1-220ENST00000497580 DUS4LO95620 317 aaKnown RBP11.75□□□□□ -0.53
GAPVD1-220ENST00000497580 GDI1P31150 447 aa11.75□□□□□ -0.53
GAPVD1-220ENST00000497580 KIR3DL2P43630 455 aa11.75□□□□□ -0.53
GAPVD1-220ENST00000497580 CYCSP99999 105 aaKnown RBP11.75□□□□□ -0.53
GAPVD1-220ENST00000497580 MESP2Q0VG99 397 aa11.75□□□□□ -0.53
GAPVD1-220ENST00000497580 ALG11Q2TAA5 492 aa11.75□□□□□ -0.53
GAPVD1-220ENST00000497580 AKR1C8PQ5T2L2 129 aa11.75□□□□□ -0.53
GAPVD1-220ENST00000497580 ADIPOR2Q86V24 386 aa11.75□□□□□ -0.53
GAPVD1-220ENST00000497580 OR4N2Q8NGD1 307 aa11.75□□□□□ -0.53
GAPVD1-220ENST00000497580 OR1A2Q9Y585 309 aa11.75□□□□□ -0.53
GAPVD1-220ENST00000497580 SPAG17Q6Q759 2223 aa11.75□□□□□ -0.53
GAPVD1-220ENST00000497580 ZNF705GA8MUZ8 300 aaPredicted RBP11.75□□□□□ -0.53
GAPVD1-220ENST00000497580 KNG1P01042 644 aa11.75□□□□□ -0.53
GAPVD1-220ENST00000497580 CCR2P41597 374 aa11.75□□□□□ -0.53
GAPVD1-220ENST00000497580 RGS19P49795 217 aa11.75□□□□□ -0.53
GAPVD1-220ENST00000497580 FHL1Q13642 323 aa11.75□□□□□ -0.53
GAPVD1-220ENST00000497580 ZNF658BQ4V348 819 aaPredicted RBP11.75□□□□□ -0.53
GAPVD1-220ENST00000497580 ZNF385CQ66K41 422 aaPredicted RBP11.75□□□□□ -0.53
GAPVD1-220ENST00000497580 TPGS2Q68CL5 300 aa11.75□□□□□ -0.53
GAPVD1-220ENST00000497580 BTNL8Q6UX41 500 aa11.75□□□□□ -0.53
GAPVD1-220ENST00000497580 ZNF550Q7Z398 422 aa11.75□□□□□ -0.53
GAPVD1-220ENST00000497580 MDGA2Q7Z553 956 aa11.75□□□□□ -0.53
GAPVD1-220ENST00000497580 KDM8Q8N371 416 aa11.75□□□□□ -0.53
GAPVD1-220ENST00000497580 OR9K2Q8NGE7 335 aa11.75□□□□□ -0.53
GAPVD1-220ENST00000497580 ZNF514Q96K75 400 aaPredicted RBP11.75□□□□□ -0.53
GAPVD1-220ENST00000497580 OR10C1Q96KK4 312 aa11.75□□□□□ -0.53
GAPVD1-220ENST00000497580 FAM83CQ9BQN1 747 aa11.75□□□□□ -0.53
GAPVD1-220ENST00000497580 IL21Q9HBE4 155 aa11.75□□□□□ -0.53
GAPVD1-220ENST00000497580 KLF15Q9UIH9 416 aa11.75□□□□□ -0.53
GAPVD1-220ENST00000497580 OR6A2O95222 327 aa11.74□□□□□ -0.53
GAPVD1-220ENST00000497580 CD1AP06126 327 aa11.74□□□□□ -0.53
GAPVD1-220ENST00000497580 CLDN6P56747 220 aa11.74□□□□□ -0.53
GAPVD1-220ENST00000497580 RNF4P78317 190 aa11.74□□□□□ -0.53
GAPVD1-220ENST00000497580 ZNF239Q16600 458 aaKnown RBP11.74□□□□□ -0.53
GAPVD1-220ENST00000497580 KHDC3LQ587J8 217 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms