RNA–Protein interactions for RNA: ENST00000496896.1

TRIM4-205, Transcript of tripartite motif containing 4, humanhuman

TSL 5

Gene TRIM4, Length 601 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-205ENST00000496896 RGRP47804 291 aa3.02□□□□□ -1.93
TRIM4-205ENST00000496896 OR1G1P47890 313 aa3.02□□□□□ -1.93
TRIM4-205ENST00000496896 NPBWR1P48145 328 aa3.02□□□□□ -1.93
TRIM4-205ENST00000496896 IDH2P48735 452 aaKnown RBP3.02□□□□□ -1.93
TRIM4-205ENST00000496896 FHITP49789 147 aa3.02□□□□□ -1.93
TRIM4-205ENST00000496896 ARFIP1P53367 373 aa3.02□□□□□ -1.93
TRIM4-205ENST00000496896 AP2S1P53680 142 aaPredicted RBP3.02□□□□□ -1.93
TRIM4-205ENST00000496896 CRISP1P54107 249 aa3.02□□□□□ -1.93
TRIM4-205ENST00000496896 WNT4P56705 351 aa3.02□□□□□ -1.93
TRIM4-205ENST00000496896 LSM3P62310 102 aaKnown RBP3.02□□□□□ -1.93
TRIM4-205ENST00000496896 IGLV3-21P80748 117 aaPredicted RBP3.02□□□□□ -1.93
TRIM4-205ENST00000496896 ARF5P84085 180 aa3.02□□□□□ -1.93
TRIM4-205ENST00000496896 CDK6Q00534 326 aa3.02□□□□□ -1.93
TRIM4-205ENST00000496896 HMGCS1Q01581 520 aa3.02□□□□□ -1.93
TRIM4-205ENST00000496896 IFITM2Q01629 132 aa3.02□□□□□ -1.93
TRIM4-205ENST00000496896 IL1RL1Q01638 556 aa3.02□□□□□ -1.93
TRIM4-205ENST00000496896 SPIBQ01892 262 aa3.02□□□□□ -1.93
TRIM4-205ENST00000496896 SEMG2Q02383 582 aa3.02□□□□□ -1.93
TRIM4-205ENST00000496896 IRF8Q02556 426 aa3.02□□□□□ -1.93
TRIM4-205ENST00000496896 RAB40BQ12829 278 aa3.02□□□□□ -1.93
TRIM4-205ENST00000496896 BAMBIQ13145 260 aa3.02□□□□□ -1.93
TRIM4-205ENST00000496896 CHIT1Q13231 466 aa3.02□□□□□ -1.93
TRIM4-205ENST00000496896 PLD1Q13393 1074 aa3.02□□□□□ -1.93
TRIM4-205ENST00000496896 MAB21L1Q13394 359 aa3.02□□□□□ -1.93
TRIM4-205ENST00000496896 TPBGQ13641 420 aa3.02□□□□□ -1.93
TRIM4-205ENST00000496896 SCARB2Q14108 478 aa3.02□□□□□ -1.93
TRIM4-205ENST00000496896 HEPACAMQ14CZ8 416 aa3.02□□□□□ -1.93
TRIM4-205ENST00000496896 PTGES3Q15185 160 aaKnown RBP3.02□□□□□ -1.93
TRIM4-205ENST00000496896 SF3A2Q15428 464 aaKnown RBP3.02□□□□□ -1.93
TRIM4-205ENST00000496896 CDKN3Q16667 212 aa3.02□□□□□ -1.93
TRIM4-205ENST00000496896 GLYR1Q49A26 553 aaPredicted RBP3.02□□□□□ -1.93
TRIM4-205ENST00000496896 TRIQKQ629K1 86 aa3.02□□□□□ -1.93
TRIM4-205ENST00000496896 C12orf73Q69YU5 71 aa3.02□□□□□ -1.93
TRIM4-205ENST00000496896 HIST2H2AA3Q6FI13 130 aa3.02□□□□□ -1.93
TRIM4-205ENST00000496896 SLC8B1Q6J4K2 584 aa3.02□□□□□ -1.93
TRIM4-205ENST00000496896 REEP3Q6NUK4 255 aa3.02□□□□□ -1.93
TRIM4-205ENST00000496896 CD200R1LQ6Q8B3 271 aa3.02□□□□□ -1.93
TRIM4-205ENST00000496896 PLET1Q6UQ28 207 aa3.02□□□□□ -1.93
TRIM4-205ENST00000496896 FAM151BQ6UXP7 276 aa3.02□□□□□ -1.93
TRIM4-205ENST00000496896 VTCN1Q7Z7D3 282 aa3.02□□□□□ -1.93
TRIM4-205ENST00000496896 ASPGQ86U10 573 aa3.02□□□□□ -1.93
TRIM4-205ENST00000496896 VASH2Q86V25 355 aa3.02□□□□□ -1.93
TRIM4-205ENST00000496896 CYP4Z2PQ8N1L4 340 aa3.02□□□□□ -1.93
TRIM4-205ENST00000496896 ZNRF1Q8ND25 227 aa3.02□□□□□ -1.93
TRIM4-205ENST00000496896 C19orf18Q8NEA5 215 aa3.02□□□□□ -1.93
TRIM4-205ENST00000496896 B3GNT7Q8NFL0 401 aa3.02□□□□□ -1.93
TRIM4-205ENST00000496896 OR2AP1Q8NGE2 309 aa3.02□□□□□ -1.93
TRIM4-205ENST00000496896 ENKURQ8TC29 256 aa3.02□□□□□ -1.93
TRIM4-205ENST00000496896 SETD7Q8WTS6 366 aaKnown RBP3.02□□□□□ -1.93
TRIM4-205ENST00000496896 DNAJA4Q8WW22 397 aaPredicted RBP3.02□□□□□ -1.93
TRIM4-205ENST00000496896 DEDD2Q8WXF8 326 aa3.02□□□□□ -1.93
TRIM4-205ENST00000496896 CREB3L1Q96BA8 519 aa3.02□□□□□ -1.93
TRIM4-205ENST00000496896 ECHDC3Q96DC8 303 aa3.02□□□□□ -1.93
TRIM4-205ENST00000496896 SIPA1Q96FS4 1042 aa3.02□□□□□ -1.93
TRIM4-205ENST00000496896 TPD52L3Q96J77 140 aa3.02□□□□□ -1.93
TRIM4-205ENST00000496896 ZNF514Q96K75 400 aaPredicted RBP3.02□□□□□ -1.93
TRIM4-205ENST00000496896 HYLS1Q96M11 299 aa3.02□□□□□ -1.93
TRIM4-205ENST00000496896 FOPNLQ96NB1 174 aa3.02□□□□□ -1.93
TRIM4-205ENST00000496896 OPALINQ96PE5 141 aa3.02□□□□□ -1.93
TRIM4-205ENST00000496896 TSSK3Q96PN8 268 aa3.02□□□□□ -1.93
TRIM4-205ENST00000496896 VPS35Q96QK1 796 aa3.02□□□□□ -1.93
TRIM4-205ENST00000496896 ZNF607Q96SK3 696 aa3.02□□□□□ -1.93
TRIM4-205ENST00000496896 ZSCAN5AQ9BUG6 496 aa3.02□□□□□ -1.93
TRIM4-205ENST00000496896 NLNQ9BYT8 704 aa3.02□□□□□ -1.93
TRIM4-205ENST00000496896 UCK2Q9BZX2 261 aa3.02□□□□□ -1.93
TRIM4-205ENST00000496896 POLR2J2Q9GZM3 115 aaKnown RBP3.02□□□□□ -1.93
TRIM4-205ENST00000496896 SRRQ9GZT4 340 aa3.02□□□□□ -1.93
TRIM4-205ENST00000496896 ZBP1Q9H171 429 aa3.02□□□□□ -1.93
TRIM4-205ENST00000496896 POLR2J3Q9H1A7 115 aaKnown RBP3.02□□□□□ -1.93
TRIM4-205ENST00000496896 OR51E2Q9H255 320 aa3.02□□□□□ -1.93
TRIM4-205ENST00000496896 PIGUQ9H490 435 aa3.02□□□□□ -1.93
TRIM4-205ENST00000496896 RANBP3Q9H6Z4 567 aaPredicted RBP3.02□□□□□ -1.93
TRIM4-205ENST00000496896 FGF20Q9NP95 211 aaPredicted RBP3.02□□□□□ -1.93
TRIM4-205ENST00000496896 ABCB8Q9NUT2 735 aa3.02□□□□□ -1.93
TRIM4-205ENST00000496896 ACOXLQ9NUZ1 547 aa3.02□□□□□ -1.93
TRIM4-205ENST00000496896 RBFOX1Q9NWB1 397 aaKnown RBP3.02□□□□□ -1.93
TRIM4-205ENST00000496896 B3GNT2Q9NY97 397 aa3.02□□□□□ -1.93
TRIM4-205ENST00000496896 SLCO1C1Q9NYB5 712 aa3.02□□□□□ -1.93
TRIM4-205ENST00000496896 ZNF226Q9NYT6 803 aa3.02□□□□□ -1.93
TRIM4-205ENST00000496896 TAS2R7Q9NYW3 318 aa3.02□□□□□ -1.93
TRIM4-205ENST00000496896 LSM7Q9UK45 103 aaKnown RBP3.02□□□□□ -1.93
TRIM4-205ENST00000496896 NUP50Q9UKX7 468 aa3.02□□□□□ -1.93
TRIM4-205ENST00000496896 TBC1D24Q9ULP9 559 aa3.02□□□□□ -1.93
TRIM4-205ENST00000496896 HS3ST2Q9Y278 367 aa3.02□□□□□ -1.93
TRIM4-205ENST00000496896 LSM2Q9Y333 95 aaKnown RBP3.02□□□□□ -1.93
TRIM4-205ENST00000496896 EXOSC1Q9Y3B2 195 aaKnown RBP3.02□□□□□ -1.93
TRIM4-205ENST00000496896 OR51B4Q9Y5P0 310 aa3.02□□□□□ -1.93
TRIM4-205ENST00000496896 V9GYH0 126 aa3.02□□□□□ -1.93
TRIM4-205ENST00000496896 EP400Q96L91 3159 aa3.02□□□□□ -1.93
TRIM4-205ENST00000496896 KIF26AQ9ULI4 1882 aaPredicted RBP3.01□□□□□ -1.93
TRIM4-205ENST00000496896 PIKFYVEQ9Y2I7 2098 aa3.01□□□□□ -1.93
TRIM4-205ENST00000496896 A0A1B0GVI7 797 aa3.01□□□□□ -1.93
TRIM4-205ENST00000496896 TRDV1A0A1B0GX56 115 aa3.01□□□□□ -1.93
TRIM4-205ENST00000496896 GNG14A0A1W2PPG7 69 aa3.01□□□□□ -1.93
TRIM4-205ENST00000496896 TSPAN11A1L157 253 aa3.01□□□□□ -1.93
TRIM4-205ENST00000496896 KRT87PA6NCN2 255 aa3.01□□□□□ -1.93
TRIM4-205ENST00000496896 FABP12A6NFH5 140 aa3.01□□□□□ -1.93
TRIM4-205ENST00000496896 GABRR3A8MPY1 467 aa3.01□□□□□ -1.93
TRIM4-205ENST00000496896 WASH3PC4AMC7 463 aa3.01□□□□□ -1.93
TRIM4-205ENST00000496896 C5orf58C9J3I9 102 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms