RNA–Protein interactions for RNA: ENST00000496622.1

SSBP1-213, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 2,620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-213ENST00000496622 IGKV3-11P04433 115 aa5.54□□□□□ -1.52
SSBP1-213ENST00000496622 OR2T7P0C7T2 308 aa5.54□□□□□ -1.52
SSBP1-213ENST00000496622 MST1P26927 711 aa5.54□□□□□ -1.52
SSBP1-213ENST00000496622 IGLV3-21P80748 117 aaPredicted RBP5.54□□□□□ -1.52
SSBP1-213ENST00000496622 KRR1Q13601 381 aaKnown RBP5.54□□□□□ -1.52
SSBP1-213ENST00000496622 GK2Q14410 553 aaPredicted RBP5.54□□□□□ -1.52
SSBP1-213ENST00000496622 INPP5JQ15735 1006 aaPredicted RBP5.54□□□□□ -1.52
SSBP1-213ENST00000496622 C2orf76Q3KRA6 126 aa5.54□□□□□ -1.52
SSBP1-213ENST00000496622 NKAIN1Q4KMZ8 207 aa5.54□□□□□ -1.52
SSBP1-213ENST00000496622 SYT14P1Q58G82 188 aa5.54□□□□□ -1.52
SSBP1-213ENST00000496622 MARCH3Q86UD3 253 aa5.54□□□□□ -1.52
SSBP1-213ENST00000496622 RANBP3LQ86VV4 465 aaPredicted RBP5.54□□□□□ -1.52
SSBP1-213ENST00000496622 MARCH9Q86YJ5 346 aa5.54□□□□□ -1.52
SSBP1-213ENST00000496622 DTWD2Q8NBA8 298 aa5.54□□□□□ -1.52
SSBP1-213ENST00000496622 RAB2BQ8WUD1 216 aa5.54□□□□□ -1.52
SSBP1-213ENST00000496622 ACOT11Q8WXI4 607 aaPredicted RBP5.54□□□□□ -1.52
SSBP1-213ENST00000496622 WBP1Q96G27 269 aa5.54□□□□□ -1.52
SSBP1-213ENST00000496622 ALKBH3Q96Q83 286 aaPredicted RBP5.54□□□□□ -1.52
SSBP1-213ENST00000496622 DCLRE1CQ96SD1 692 aaKnown RBP5.54□□□□□ -1.52
SSBP1-213ENST00000496622 TTTY10Q9BZA0 68 aa5.54□□□□□ -1.52
SSBP1-213ENST00000496622 MIXL1Q9H2W2 232 aa5.54□□□□□ -1.52
SSBP1-213ENST00000496622 NIPAL2Q9H841 368 aa5.54□□□□□ -1.52
SSBP1-213ENST00000496622 CENPMQ9NSP4 180 aa5.54□□□□□ -1.52
SSBP1-213ENST00000496622 GFOD1Q9NXC2 390 aa5.54□□□□□ -1.52
SSBP1-213ENST00000496622 SEC14L4Q9UDX3 406 aa5.54□□□□□ -1.52
SSBP1-213ENST00000496622 NUFIP1Q9UHK0 495 aaKnown RBP5.54□□□□□ -1.52
SSBP1-213ENST00000496622 NAGKQ9UJ70 344 aa5.54□□□□□ -1.52
SSBP1-213ENST00000496622 ADAM30Q9UKF2 790 aa5.54□□□□□ -1.52
SSBP1-213ENST00000496622 B4DXG7 233 aa5.54□□□□□ -1.52
SSBP1-213ENST00000496622 RNF13O43567 381 aa5.54□□□□□ -1.52
SSBP1-213ENST00000496622 SELENOFO60613 162 aa5.54□□□□□ -1.52
SSBP1-213ENST00000496622 RAD1O60671 282 aa5.54□□□□□ -1.52
SSBP1-213ENST00000496622 BRI3O95415 125 aa5.54□□□□□ -1.52
SSBP1-213ENST00000496622 CELA2AP08217 269 aa5.54□□□□□ -1.52
SSBP1-213ENST00000496622 STAG3L2P0CL84 134 aa5.54□□□□□ -1.52
SSBP1-213ENST00000496622 RPS4Y1P22090 263 aaKnown RBP5.54□□□□□ -1.52
SSBP1-213ENST00000496622 CD1BP29016 333 aa5.54□□□□□ -1.52
SSBP1-213ENST00000496622 SOX3P41225 446 aa5.54□□□□□ -1.52
SSBP1-213ENST00000496622 RPS5P46782 204 aaKnown RBP5.54□□□□□ -1.52
SSBP1-213ENST00000496622 ZNF81P51508 661 aa5.54□□□□□ -1.52
SSBP1-213ENST00000496622 CRYZQ08257 329 aaKnown RBP5.54□□□□□ -1.52
SSBP1-213ENST00000496622 CLINT1Q14677 625 aa5.54□□□□□ -1.52
SSBP1-213ENST00000496622 CTF1Q16619 201 aa5.54□□□□□ -1.52
SSBP1-213ENST00000496622 OR2G6Q5TZ20 316 aa5.54□□□□□ -1.52
SSBP1-213ENST00000496622 C1QL3Q5VWW1 255 aa5.54□□□□□ -1.52
SSBP1-213ENST00000496622 RASSF6Q6ZTQ3 369 aa5.54□□□□□ -1.52
SSBP1-213ENST00000496622 SLC34A3Q8N130 599 aa5.54□□□□□ -1.52
SSBP1-213ENST00000496622 ZFP41Q8N8Y5 198 aa5.54□□□□□ -1.52
SSBP1-213ENST00000496622 DMBX1Q8NFW5 382 aa5.54□□□□□ -1.52
SSBP1-213ENST00000496622 TMEM239Q8WW34 195 aa5.54□□□□□ -1.52
SSBP1-213ENST00000496622 TMEM203Q969S6 136 aa5.54□□□□□ -1.52
SSBP1-213ENST00000496622 RRNAD1Q96FB5 475 aaKnown RBP5.54□□□□□ -1.52
SSBP1-213ENST00000496622 SIGLEC11Q96RL6 698 aa5.54□□□□□ -1.52
SSBP1-213ENST00000496622 LMF2Q9BU23 707 aaKnown RBP5.54□□□□□ -1.52
SSBP1-213ENST00000496622 YTHDF1Q9BYJ9 559 aaKnown RBP5.54□□□□□ -1.52
SSBP1-213ENST00000496622 PPIL3Q9H2H8 161 aaKnown RBP5.54□□□□□ -1.52
SSBP1-213ENST00000496622 HIPK2Q9H2X6 1198 aa5.54□□□□□ -1.52
SSBP1-213ENST00000496622 EXO5Q9H790 373 aa5.54□□□□□ -1.52
SSBP1-213ENST00000496622 CACYBPQ9HB71 228 aaKnown RBP5.54□□□□□ -1.52
SSBP1-213ENST00000496622 SMURF1Q9HCE7 757 aa5.54□□□□□ -1.52
SSBP1-213ENST00000496622 HHATLQ9HCP6 504 aa5.54□□□□□ -1.52
SSBP1-213ENST00000496622 SIDT1Q9NXL6 827 aaKnown RBP5.54□□□□□ -1.52
SSBP1-213ENST00000496622 FBXL3Q9UKT7 428 aa5.54□□□□□ -1.52
SSBP1-213ENST00000496622 ZNF346Q9UL40 294 aaKnown RBP5.54□□□□□ -1.52
SSBP1-213ENST00000496622 TCFL5Q9UL49 500 aa5.54□□□□□ -1.52
SSBP1-213ENST00000496622 ADAM18Q9Y3Q7 739 aa5.54□□□□□ -1.52
SSBP1-213ENST00000496622 POMT1Q9Y6A1 747 aa5.54□□□□□ -1.52
SSBP1-213ENST00000496622 ZFYVE26Q68DK2 2539 aa5.54□□□□□ -1.52
SSBP1-213ENST00000496622 ABCA12Q86UK0 2595 aa5.53□□□□□ -1.52
SSBP1-213ENST00000496622 TCRBV16S1A1N1A0A5B0 115 aa5.53□□□□□ -1.52
SSBP1-213ENST00000496622 TRAPPC13A5PLN9 417 aa5.53□□□□□ -1.52
SSBP1-213ENST00000496622 FLRT2O43155 660 aa5.53□□□□□ -1.52
SSBP1-213ENST00000496622 CA11O75493 328 aa5.53□□□□□ -1.52
SSBP1-213ENST00000496622 LYPD3O95274 346 aa5.53□□□□□ -1.52
SSBP1-213ENST00000496622 SP9P0CG40 484 aa5.53□□□□□ -1.52
SSBP1-213ENST00000496622 DRD5P21918 477 aa5.53□□□□□ -1.52
SSBP1-213ENST00000496622 MPLP40238 635 aa5.53□□□□□ -1.52
SSBP1-213ENST00000496622 SLC16A1P53985 500 aa5.53□□□□□ -1.52
SSBP1-213ENST00000496622 TMEM33P57088 247 aa5.53□□□□□ -1.52
SSBP1-213ENST00000496622 CDK5Q00535 292 aa5.53□□□□□ -1.52
SSBP1-213ENST00000496622 ECH1Q13011 328 aa5.53□□□□□ -1.52
SSBP1-213ENST00000496622 EBPQ15125 230 aaKnown RBP5.53□□□□□ -1.52
SSBP1-213ENST00000496622 MICBQ29980 383 aa5.53□□□□□ -1.52
SSBP1-213ENST00000496622 PRAMEF8Q5VWM4 474 aa5.53□□□□□ -1.52
SSBP1-213ENST00000496622 PRAMEF7Q5VXH5 474 aa5.53□□□□□ -1.52
SSBP1-213ENST00000496622 RHBDD2Q6NTF9 364 aa5.53□□□□□ -1.52
SSBP1-213ENST00000496622 VWA1Q6PCB0 445 aa5.53□□□□□ -1.52
SSBP1-213ENST00000496622 ZNF782Q6ZMW2 699 aaPredicted RBP5.53□□□□□ -1.52
SSBP1-213ENST00000496622 MBOAT2Q6ZWT7 520 aa5.53□□□□□ -1.52
SSBP1-213ENST00000496622 PRSS48Q7RTY5 328 aa5.53□□□□□ -1.52
SSBP1-213ENST00000496622 SLITRK4Q8IW52 837 aa5.53□□□□□ -1.52
SSBP1-213ENST00000496622 TCTE3Q8IZS6 198 aa5.53□□□□□ -1.52
SSBP1-213ENST00000496622 FAM83FQ8NEG4 500 aaPredicted RBP5.53□□□□□ -1.52
SSBP1-213ENST00000496622 CCDC54Q8NEL0 328 aa5.53□□□□□ -1.52
SSBP1-213ENST00000496622 OR4F15Q8NGB8 312 aa5.53□□□□□ -1.52
SSBP1-213ENST00000496622 WDR36Q8NI36 951 aaKnown RBP5.53□□□□□ -1.52
SSBP1-213ENST00000496622 BPIFA2Q96DR5 249 aa5.53□□□□□ -1.52
SSBP1-213ENST00000496622 TNFRSF13CQ96RJ3 184 aa5.53□□□□□ -1.52
SSBP1-213ENST00000496622 GFM1Q96RP9 751 aaKnown RBP5.53□□□□□ -1.52
SSBP1-213ENST00000496622 TBX5Q99593 518 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms