RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 RBP7Q96R05 134 aa7.76□□□□□ -1.17
HDAC3-212ENST00000492407 ZNF347Q96SE7 839 aa7.76□□□□□ -1.17
HDAC3-212ENST00000492407 TMPRSS13Q9BYE2 586 aa7.76□□□□□ -1.17
HDAC3-212ENST00000492407 TXNIPQ9H3M7 391 aa7.76□□□□□ -1.17
HDAC3-212ENST00000492407 NARFLQ9H6Q4 476 aa7.76□□□□□ -1.17
HDAC3-212ENST00000492407 ZMAT3Q9HA38 289 aaKnown RBP7.76□□□□□ -1.17
HDAC3-212ENST00000492407 LIN7BQ9HAP6 207 aa7.76□□□□□ -1.17
HDAC3-212ENST00000492407 ELOVL3Q9HB03 270 aa7.76□□□□□ -1.17
HDAC3-212ENST00000492407 LPAR2Q9HBW0 351 aa7.76□□□□□ -1.17
HDAC3-212ENST00000492407 EGFL7Q9UHF1 273 aa7.76□□□□□ -1.17
HDAC3-212ENST00000492407 HIF3AQ9Y2N7 669 aa7.76□□□□□ -1.17
HDAC3-212ENST00000492407 AP3M1Q9Y2T2 418 aa7.76□□□□□ -1.17
HDAC3-212ENST00000492407 POLR3KQ9Y2Y1 108 aaPredicted RBP7.76□□□□□ -1.17
HDAC3-212ENST00000492407 WIPI2Q9Y4P8 454 aa7.76□□□□□ -1.17
HDAC3-212ENST00000492407 TIMM10BQ9Y5J6 103 aa7.76□□□□□ -1.17
HDAC3-212ENST00000492407 A6NIZ1 184 aa7.75□□□□□ -1.17
HDAC3-212ENST00000492407 KPNA4O00629 521 aaPredicted RBP7.75□□□□□ -1.17
HDAC3-212ENST00000492407 SPRY1O43609 319 aaPredicted RBP7.75□□□□□ -1.17
HDAC3-212ENST00000492407 CDC14BO60729 498 aa7.75□□□□□ -1.17
HDAC3-212ENST00000492407 FOXH1O75593 365 aa7.75□□□□□ -1.17
HDAC3-212ENST00000492407 UBOX5O94941 541 aa7.75□□□□□ -1.17
HDAC3-212ENST00000492407 FSHBP01225 129 aa7.75□□□□□ -1.17
HDAC3-212ENST00000492407 IGHV1-46P01743 117 aa7.75□□□□□ -1.17
HDAC3-212ENST00000492407 IGHMP01871 453 aa7.75□□□□□ -1.17
HDAC3-212ENST00000492407 F13BP05160 661 aa7.75□□□□□ -1.17
HDAC3-212ENST00000492407 COX5BP10606 129 aa7.75□□□□□ -1.17
HDAC3-212ENST00000492407 CCL2P13500 99 aa7.75□□□□□ -1.17
HDAC3-212ENST00000492407 SELLP14151 372 aa7.75□□□□□ -1.17
HDAC3-212ENST00000492407 AQP2P41181 271 aa7.75□□□□□ -1.17
HDAC3-212ENST00000492407 HTR2BP41595 481 aa7.75□□□□□ -1.17
HDAC3-212ENST00000492407 ARHGDIAP52565 204 aa7.75□□□□□ -1.17
HDAC3-212ENST00000492407 CRYBA2P53672 197 aa7.75□□□□□ -1.17
HDAC3-212ENST00000492407 RAP1BP61224 184 aa7.75□□□□□ -1.17
HDAC3-212ENST00000492407 RAP1AP62834 184 aa7.75□□□□□ -1.17
HDAC3-212ENST00000492407 MVKQ03426 396 aa7.75□□□□□ -1.17
HDAC3-212ENST00000492407 SELPLGQ14242 412 aa7.75□□□□□ -1.17
HDAC3-212ENST00000492407 TUSC1Q2TAM9 212 aa7.75□□□□□ -1.17
HDAC3-212ENST00000492407 C6orf183Q5T699 404 aa7.75□□□□□ -1.17
HDAC3-212ENST00000492407 NANOGP8Q6NSW7 305 aa7.75□□□□□ -1.17
HDAC3-212ENST00000492407 SLC25A47Q6Q0C1 308 aa7.75□□□□□ -1.17
HDAC3-212ENST00000492407 FOXL2NBQ6ZUU3 175 aa7.75□□□□□ -1.17
HDAC3-212ENST00000492407 CALHM3Q86XJ0 350 aa7.75□□□□□ -1.17
HDAC3-212ENST00000492407 SLC38A6Q8IZM9 456 aa7.75□□□□□ -1.17
HDAC3-212ENST00000492407 LINC00518Q8N0U6 118 aa7.75□□□□□ -1.17
HDAC3-212ENST00000492407 KLF14Q8TD94 323 aaPredicted RBP7.75□□□□□ -1.17
HDAC3-212ENST00000492407 MAGEB18Q96M61 343 aa7.75□□□□□ -1.17
HDAC3-212ENST00000492407 TSPAN32Q96QS1 320 aa7.75□□□□□ -1.17
HDAC3-212ENST00000492407 NUDT15Q9NV35 164 aa7.75□□□□□ -1.17
HDAC3-212ENST00000492407 IL19Q9UHD0 177 aa7.75□□□□□ -1.17
HDAC3-212ENST00000492407 RIMS3Q9UJD0 308 aa7.75□□□□□ -1.17
HDAC3-212ENST00000492407 NDRG4Q9ULP0 352 aaKnown RBP7.75□□□□□ -1.17
HDAC3-212ENST00000492407 MED31Q9Y3C7 131 aa7.75□□□□□ -1.17
HDAC3-212ENST00000492407 UGT2A1Q9Y4X1 527 aa7.75□□□□□ -1.17
HDAC3-212ENST00000492407 TENM1Q9UKZ4 2725 aa7.74□□□□□ -1.17
HDAC3-212ENST00000492407 LOC100509620A0A075B734 347 aa7.74□□□□□ -1.17
HDAC3-212ENST00000492407 LOC105371242A0A075B767 164 aa7.74□□□□□ -1.17
HDAC3-212ENST00000492407 C5orf49A4QMS7 147 aa7.74□□□□□ -1.17
HDAC3-212ENST00000492407 EFCAB10A6NFE3 127 aa7.74□□□□□ -1.17
HDAC3-212ENST00000492407 BBIP1A8MTZ0 92 aa7.74□□□□□ -1.17
HDAC3-212ENST00000492407 J3QW42 95 aa7.74□□□□□ -1.17
HDAC3-212ENST00000492407 IFNL4K9M1U5 179 aa7.74□□□□□ -1.17
HDAC3-212ENST00000492407 SSX5O60225 188 aa7.74□□□□□ -1.17
HDAC3-212ENST00000492407 RBBP9O75884 186 aa7.74□□□□□ -1.17
HDAC3-212ENST00000492407 AVPP01185 164 aa7.74□□□□□ -1.17
HDAC3-212ENST00000492407 ZNF32P17041 273 aa7.74□□□□□ -1.17
HDAC3-212ENST00000492407 ATF4P18848 351 aaPredicted RBP7.74□□□□□ -1.17
HDAC3-212ENST00000492407 GSSP48637 474 aa7.74□□□□□ -1.17
HDAC3-212ENST00000492407 TAS2R41P59536 307 aa7.74□□□□□ -1.17
HDAC3-212ENST00000492407 RPL27P61353 136 aaKnown RBP7.74□□□□□ -1.17
HDAC3-212ENST00000492407 ERVS71-1P61550 626 aa7.74□□□□□ -1.17
HDAC3-212ENST00000492407 PSG4Q00888 419 aa7.74□□□□□ -1.17
HDAC3-212ENST00000492407 ST3GAL3Q11203 375 aa7.74□□□□□ -1.17
HDAC3-212ENST00000492407 FOXL1Q12952 345 aa7.74□□□□□ -1.17
HDAC3-212ENST00000492407 DCTN2Q13561 401 aaKnown RBP7.74□□□□□ -1.17
HDAC3-212ENST00000492407 ALKBH6Q3KRA9 238 aa7.74□□□□□ -1.17
HDAC3-212ENST00000492407 TMEM155Q4W5P6 130 aa7.74□□□□□ -1.17
HDAC3-212ENST00000492407 ALG10Q5BKT4 473 aa7.74□□□□□ -1.17
HDAC3-212ENST00000492407 AVPI1Q5T686 147 aa7.74□□□□□ -1.17
HDAC3-212ENST00000492407 ZNF101Q8IZC7 436 aa7.74□□□□□ -1.17
HDAC3-212ENST00000492407 RNF113BQ8IZP6 322 aaKnown RBP7.74□□□□□ -1.17
HDAC3-212ENST00000492407 LRRC18Q8N456 261 aa7.74□□□□□ -1.17
HDAC3-212ENST00000492407 BPIFB2Q8N4F0 458 aa7.74□□□□□ -1.17
HDAC3-212ENST00000492407 SPICQ8N5J4 248 aa7.74□□□□□ -1.17
HDAC3-212ENST00000492407 SYT14Q8NB59 555 aa7.74□□□□□ -1.17
HDAC3-212ENST00000492407 FAM156AQ8NDB6 213 aa7.74□□□□□ -1.17
HDAC3-212ENST00000492407 NPEPL1Q8NDH3 523 aa7.74□□□□□ -1.17
HDAC3-212ENST00000492407 ST7LQ8TDW4 575 aa7.74□□□□□ -1.17
HDAC3-212ENST00000492407 CHAC2Q8WUX2 184 aa7.74□□□□□ -1.17
HDAC3-212ENST00000492407 TMEM255BQ8WV15 326 aa7.74□□□□□ -1.17
HDAC3-212ENST00000492407 CCL17Q92583 94 aa7.74□□□□□ -1.17
HDAC3-212ENST00000492407 RFKQ969G6 155 aa7.74□□□□□ -1.17
HDAC3-212ENST00000492407 POP5Q969H6 163 aaKnown RBP7.74□□□□□ -1.17
HDAC3-212ENST00000492407 EME1Q96AY2 570 aa7.74□□□□□ -1.17
HDAC3-212ENST00000492407 SAMD8Q96LT4 415 aa7.74□□□□□ -1.17
HDAC3-212ENST00000492407 GPA33Q99795 319 aa7.74□□□□□ -1.17
HDAC3-212ENST00000492407 SLC29A1Q99808 456 aa7.74□□□□□ -1.17
HDAC3-212ENST00000492407 ECSITQ9BQ95 431 aa7.74□□□□□ -1.17
HDAC3-212ENST00000492407 OR2H1Q9GZK4 316 aa7.74□□□□□ -1.17
HDAC3-212ENST00000492407 WDR12Q9GZL7 423 aaKnown RBP7.74□□□□□ -1.17
HDAC3-212ENST00000492407 C7orf69Q9H7B7 122 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms