RNA–Protein interactions for RNA: ENST00000491295.1

GGA1-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, human

TSL 4

Gene GGA1, Length 594 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA1-223	ENST00000491295	GCM1	Q9NP62	436 aa		15.09	■□□□□ 0.01
GGA1-223	ENST00000491295	MMP26	Q9NRE1	261 aa		15.09	■□□□□ 0.01
GGA1-223	ENST00000491295	DCAF16	Q9NXF7	216 aa		15.09	■□□□□ 0.01
GGA1-223	ENST00000491295	IL20RA	Q9UHF4	553 aa		15.09	■□□□□ 0.01
GGA1-223	ENST00000491295	LRCH1	Q9Y2L9	728 aa		15.09	■□□□□ 0.01
GGA1-223	ENST00000491295	ARHGAP32	A7KAX9	2087 aa		15.08	■□□□□ 0.01
GGA1-223	ENST00000491295	TRAPPC2L	H3BP13	241 aa		15.08	■□□□□ 0
GGA1-223	ENST00000491295	OMP	P47874	163 aa		15.08	■□□□□ 0
GGA1-223	ENST00000491295	SRP9	P49458	86 aa	Known RBP	15.08	■□□□□ 0
GGA1-223	ENST00000491295	HIST1H3A	P68431	136 aa		15.08	■□□□□ 0
GGA1-223	ENST00000491295	ZMYND11	Q15326	602 aa		15.08	■□□□□ 0
GGA1-223	ENST00000491295	CCDC92	Q53HC0	331 aa	Predicted RBP	15.08	■□□□□ 0
GGA1-223	ENST00000491295	AWAT1	Q58HT5	328 aa		15.08	■□□□□ 0
GGA1-223	ENST00000491295	HIST2H3PS2	Q5TEC6	136 aa		15.08	■□□□□ 0
GGA1-223	ENST00000491295	HIST2H3A	Q71DI3	136 aa		15.08	■□□□□ 0
GGA1-223	ENST00000491295	ZNF771	Q7L3S4	317 aa	Predicted RBP	15.08	■□□□□ 0
GGA1-223	ENST00000491295	TSEN54	Q7Z6J9	526 aa	Known RBP	15.08	■□□□□ 0
GGA1-223	ENST00000491295	ATG16L2	Q8NAA4	619 aa		15.08	■□□□□ 0
GGA1-223	ENST00000491295	OR8G5	Q8NG78	346 aa		15.08	■□□□□ 0
GGA1-223	ENST00000491295	ZNF582	Q96NG8	517 aa	Predicted RBP	15.08	■□□□□ 0
GGA1-223	ENST00000491295	COQ7	Q99807	217 aa		15.08	■□□□□ 0
GGA1-223	ENST00000491295	NUAK2	Q9H093	628 aa		15.08	■□□□□ 0
GGA1-223	ENST00000491295	HDHD2	Q9H0R4	259 aa		15.08	■□□□□ 0
GGA1-223	ENST00000491295	RERGL	Q9H628	205 aa		15.08	■□□□□ 0
GGA1-223	ENST00000491295	NDUFAF4	Q9P032	175 aa		15.08	■□□□□ 0
GGA1-223	ENST00000491295	GMPR2	Q9P2T1	348 aa	Known RBP	15.08	■□□□□ 0
GGA1-223	ENST00000491295	AURKC	Q9UQB9	309 aa		15.08	■□□□□ 0
GGA1-223	ENST00000491295	IMPA2	O14732	288 aa		15.07	■□□□□ 0
GGA1-223	ENST00000491295	GMNN	O75496	209 aa		15.07	■□□□□ 0
GGA1-223	ENST00000491295	WNT2	P09544	360 aa		15.07	■□□□□ 0
GGA1-223	ENST00000491295	HKR1	P10072	659 aa		15.07	■□□□□ 0
GGA1-223	ENST00000491295	SELE	P16581	610 aa		15.07	■□□□□ 0
GGA1-223	ENST00000491295	EGR1	P18146	543 aa		15.07	■□□□□ 0
GGA1-223	ENST00000491295	PRTN3	P24158	256 aa		15.07	■□□□□ 0
GGA1-223	ENST00000491295	SMIM11A	P58511	58 aa		15.07	■□□□□ 0
GGA1-223	ENST00000491295	PAX8	Q06710	450 aa		15.07	■□□□□ 0
GGA1-223	ENST00000491295	ZNF181	Q2M3W8	571 aa		15.07	■□□□□ 0
GGA1-223	ENST00000491295	C1orf94	Q6P1W5	598 aa		15.07	■□□□□ 0
GGA1-223	ENST00000491295	C22orf15	Q8WYQ4	148 aa		15.07	■□□□□ 0
GGA1-223	ENST00000491295	SLC7A6	Q92536	515 aa		15.07	■□□□□ 0
GGA1-223	ENST00000491295	CMTM5	Q96DZ9	223 aa		15.07	■□□□□ 0
GGA1-223	ENST00000491295	RSRC1	Q96IZ7	334 aa	Known RBP	15.07	■□□□□ 0
GGA1-223	ENST00000491295	ABCD2	Q9UBJ2	740 aa		15.07	■□□□□ 0
GGA1-223	ENST00000491295	MIOX	Q9UGB7	285 aa		15.07	■□□□□ 0
GGA1-223	ENST00000491295	OR5V1	Q9UGF6	321 aa		15.07	■□□□□ 0
GGA1-223	ENST00000491295	SAMD4A	Q9UPU9	718 aa	Known RBP	15.07	■□□□□ 0
GGA1-223	ENST00000491295	POLR1D	Q9Y2S0	133 aa		15.07	■□□□□ 0
GGA1-223	ENST00000491295	IER3IP1	Q9Y5U9	82 aa		15.07	■□□□□ 0
GGA1-223	ENST00000491295	LRRC30	A6NM36	301 aa		15.06	■□□□□ 0
GGA1-223	ENST00000491295	SOCS2	O14508	198 aa		15.06	■□□□□ 0
GGA1-223	ENST00000491295	RER1	O15258	196 aa		15.06	■□□□□ 0
GGA1-223	ENST00000491295	CDKN2A	P42771	156 aa	Known RBP	15.06	■□□□□ 0
GGA1-223	ENST00000491295	MMP16	P51512	607 aa		15.06	■□□□□ 0
GGA1-223	ENST00000491295	KRT72	Q14CN4	511 aa		15.06	■□□□□ 0
GGA1-223	ENST00000491295	FGD3	Q5JSP0	725 aa		15.06	■□□□□ 0
GGA1-223	ENST00000491295	SMARCD3	Q6STE5	483 aa		15.06	■□□□□ 0
GGA1-223	ENST00000491295	LRRN1	Q6UXK5	716 aa		15.06	■□□□□ 0
GGA1-223	ENST00000491295	C1orf87	Q8N0U7	546 aa		15.06	■□□□□ 0
GGA1-223	ENST00000491295	SIGLECL1	Q8N7X8	197 aa		15.06	■□□□□ 0
GGA1-223	ENST00000491295	PLEKHA8	Q96JA3	519 aa		15.06	■□□□□ 0
GGA1-223	ENST00000491295	DHRS1	Q96LJ7	313 aa		15.06	■□□□□ 0
GGA1-223	ENST00000491295	SLC30A2	Q9BRI3	323 aa		15.06	■□□□□ 0
GGA1-223	ENST00000491295	ZNF747	Q9BV97	191 aa		15.06	■□□□□ 0
GGA1-223	ENST00000491295	DCAF13	Q9NV06	445 aa	Known RBP	15.06	■□□□□ 0
GGA1-223	ENST00000491295		A0A1B0GWJ7	208 aa		15.05	■□□□□ -0
GGA1-223	ENST00000491295	UNC119B	A6NIH7	251 aa		15.05	■□□□□ -0
GGA1-223	ENST00000491295	CEACAM18	A8MTB9	384 aa		15.05	■□□□□ -0
GGA1-223	ENST00000491295	IQCF6	A8MYZ5	107 aa		15.05	■□□□□ -0
GGA1-223	ENST00000491295	NUDT2	P50583	147 aa		15.05	■□□□□ -0
GGA1-223	ENST00000491295	COX10	Q12887	443 aa		15.05	■□□□□ -0
GGA1-223	ENST00000491295	ECH1	Q13011	328 aa		15.05	■□□□□ -0
GGA1-223	ENST00000491295	GLYAT	Q6IB77	296 aa		15.05	■□□□□ -0
GGA1-223	ENST00000491295	SHISA2	Q6UWI4	295 aa		15.05	■□□□□ -0
GGA1-223	ENST00000491295	BTNL3	Q6UXE8	466 aa		15.05	■□□□□ -0
GGA1-223	ENST00000491295	COLCA1	Q6ZS62	124 aa		15.05	■□□□□ -0
GGA1-223	ENST00000491295	PTCHD4	Q6ZW05	846 aa		15.05	■□□□□ -0
GGA1-223	ENST00000491295	ERGIC1	Q969X5	290 aa		15.05	■□□□□ -0
GGA1-223	ENST00000491295	MEGF10	Q96KG7	1140 aa		15.05	■□□□□ -0
GGA1-223	ENST00000491295	C7orf34	Q96L11	122 aa		15.05	■□□□□ -0
GGA1-223	ENST00000491295	SSBP3	Q9BWW4	388 aa	Predicted RBP	15.05	■□□□□ -0
GGA1-223	ENST00000491295	HCAR1	Q9BXC0	346 aa		15.05	■□□□□ -0
GGA1-223	ENST00000491295	TMEM165	Q9HC07	324 aa		15.05	■□□□□ -0
GGA1-223	ENST00000491295	PTTG3P	Q9NZH4	202 aa		15.05	■□□□□ -0
GGA1-223	ENST00000491295	ZNF69	Q9UC07	566 aa		15.05	■□□□□ -0
GGA1-223	ENST00000491295	PPIAL4A	Q9Y536	164 aa		15.05	■□□□□ -0
GGA1-223	ENST00000491295	CLDN34	H7C241	214 aa		15.04	■□□□□ -0
GGA1-223	ENST00000491295	ARPC3	O15145	178 aa		15.04	■□□□□ -0
GGA1-223	ENST00000491295	DBH	P09172	617 aa		15.04	■□□□□ -0
GGA1-223	ENST00000491295	NCK1	P16333	377 aa		15.04	■□□□□ -0
GGA1-223	ENST00000491295	MTNR1A	P48039	350 aa		15.04	■□□□□ -0
GGA1-223	ENST00000491295	FXYD6P3	P58550	94 aa		15.04	■□□□□ -0
GGA1-223	ENST00000491295	SEC61A1	P61619	476 aa	Known RBP	15.04	■□□□□ -0
GGA1-223	ENST00000491295	HLX	Q14774	488 aa	Predicted RBP	15.04	■□□□□ -0
GGA1-223	ENST00000491295	RFX4	Q33E94	735 aa		15.04	■□□□□ -0
GGA1-223	ENST00000491295	SLC36A3	Q495N2	470 aa		15.04	■□□□□ -0
GGA1-223	ENST00000491295	HSP90B2P	Q58FF3	399 aa		15.04	■□□□□ -0
GGA1-223	ENST00000491295	KLF17	Q5JT82	389 aa	Predicted RBP	15.04	■□□□□ -0
GGA1-223	ENST00000491295	OR2T2	Q6IF00	324 aa		15.04	■□□□□ -0
GGA1-223	ENST00000491295	OR5AS1	Q8N127	324 aa		15.04	■□□□□ -0
GGA1-223	ENST00000491295	CELF2-AS1	Q8N7Q2	184 aa		15.04	■□□□□ -0

Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms