RNA–Protein interactions for RNA: ENST00000491104.1

CACNA1C-227, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 5

Gene CACNA1C, Length 669 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-227ENST00000491104 ZNF101Q8IZC7 436 aa9.31□□□□□ -0.92
CACNA1C-227ENST00000491104 ZNF295-AS1Q8N0V1 137 aa9.31□□□□□ -0.92
CACNA1C-227ENST00000491104 ZNF786Q8N393 782 aa9.31□□□□□ -0.92
CACNA1C-227ENST00000491104 ZNF454Q8N9F8 522 aa9.31□□□□□ -0.92
CACNA1C-227ENST00000491104 RNF133Q8WVZ7 376 aa9.31□□□□□ -0.92
CACNA1C-227ENST00000491104 KCNS3Q9BQ31 491 aa9.31□□□□□ -0.92
CACNA1C-227ENST00000491104 DDX28Q9NUL7 540 aaKnown RBP9.31□□□□□ -0.92
CACNA1C-227ENST00000491104 PAK1IP1Q9NWT1 392 aaPredicted RBP9.31□□□□□ -0.92
CACNA1C-227ENST00000491104 IKZF2Q9UKS7 526 aa9.31□□□□□ -0.92
CACNA1C-227ENST00000491104 GRIP1Q9Y3R0 1128 aa9.31□□□□□ -0.92
CACNA1C-227ENST00000491104 RNF115Q9Y4L5 304 aa9.31□□□□□ -0.92
CACNA1C-227ENST00000491104 LRP12Q9Y561 859 aa9.31□□□□□ -0.92
CACNA1C-227ENST00000491104 ATP23Q9Y6H3 246 aa9.31□□□□□ -0.92
CACNA1C-227ENST00000491104 DAPL1A0PJW8 107 aa9.3□□□□□ -0.92
CACNA1C-227ENST00000491104 C5orf63A6NC05 138 aa9.3□□□□□ -0.92
CACNA1C-227ENST00000491104 GPRIN2O60269 458 aa9.3□□□□□ -0.92
CACNA1C-227ENST00000491104 PTHP01270 115 aa9.3□□□□□ -0.92
CACNA1C-227ENST00000491104 IGHA1P01876 353 aa9.3□□□□□ -0.92
CACNA1C-227ENST00000491104 H2BFMP0C1H6 154 aa9.3□□□□□ -0.92
CACNA1C-227ENST00000491104 OR2T7P0C7T2 308 aa9.3□□□□□ -0.92
CACNA1C-227ENST00000491104 PAX7P23759 505 aa9.3□□□□□ -0.92
CACNA1C-227ENST00000491104 SLC6A9P48067 706 aa9.3□□□□□ -0.92
CACNA1C-227ENST00000491104 CX3CR1P49238 355 aa9.3□□□□□ -0.92
CACNA1C-227ENST00000491104 NR1H2P55055 460 aa9.3□□□□□ -0.92
CACNA1C-227ENST00000491104 SNTB2Q13425 540 aaKnown RBP9.3□□□□□ -0.92
CACNA1C-227ENST00000491104 KRTAP27-1Q3LI81 207 aa9.3□□□□□ -0.92
CACNA1C-227ENST00000491104 TP53I3Q53FA7 332 aa9.3□□□□□ -0.92
CACNA1C-227ENST00000491104 RFPL4BQ6ZWI9 263 aa9.3□□□□□ -0.92
CACNA1C-227ENST00000491104 KRT77Q7Z794 578 aa9.3□□□□□ -0.92
CACNA1C-227ENST00000491104 LHFPL3Q86UP9 236 aa9.3□□□□□ -0.92
CACNA1C-227ENST00000491104 TMEM200AQ86VY9 491 aa9.3□□□□□ -0.92
CACNA1C-227ENST00000491104 ZNF283Q8N7M2 679 aa9.3□□□□□ -0.92
CACNA1C-227ENST00000491104 ZNF540Q8NDQ6 660 aa9.3□□□□□ -0.92
CACNA1C-227ENST00000491104 OR1J2Q8NGS2 313 aa9.3□□□□□ -0.92
CACNA1C-227ENST00000491104 OR2T27Q8NH04 317 aa9.3□□□□□ -0.92
CACNA1C-227ENST00000491104 LILRB1Q8NHL6 650 aaPredicted RBP9.3□□□□□ -0.92
CACNA1C-227ENST00000491104 MARVELD3Q96A59 401 aa9.3□□□□□ -0.92
CACNA1C-227ENST00000491104 OR8B4Q96RC9 309 aa9.3□□□□□ -0.92
CACNA1C-227ENST00000491104 KCNJ15Q99712 375 aa9.3□□□□□ -0.92
CACNA1C-227ENST00000491104 TMEM204Q9BSN7 226 aa9.3□□□□□ -0.92
CACNA1C-227ENST00000491104 POFUT1Q9H488 388 aa9.3□□□□□ -0.92
CACNA1C-227ENST00000491104 ELOVL3Q9HB03 270 aa9.3□□□□□ -0.92
CACNA1C-227ENST00000491104 SLC24A3Q9HC58 644 aa9.3□□□□□ -0.92
CACNA1C-227ENST00000491104 MOV10Q9HCE1 1003 aaKnown RBP9.3□□□□□ -0.92
CACNA1C-227ENST00000491104 FGF20Q9NP95 211 aaPredicted RBP9.3□□□□□ -0.92
CACNA1C-227ENST00000491104 PLCXD1Q9NUJ7 323 aa9.3□□□□□ -0.92
CACNA1C-227ENST00000491104 MRPS18AQ9NVS2 196 aaKnown RBP9.3□□□□□ -0.92
CACNA1C-227ENST00000491104 MRM2Q9UI43 246 aaKnown RBP9.3□□□□□ -0.92
CACNA1C-227ENST00000491104 PSORS1C1Q9UIG5 152 aa9.3□□□□□ -0.92
CACNA1C-227ENST00000491104 POU2F3Q9UKI9 436 aa9.3□□□□□ -0.92
CACNA1C-227ENST00000491104 N6AMT1Q9Y5N5 214 aa9.3□□□□□ -0.92
CACNA1C-227ENST00000491104 TMEM14AQ9Y6G1 99 aa9.3□□□□□ -0.92
CACNA1C-227ENST00000491104 RAI1Q7Z5J4 1906 aaPredicted RBP9.29□□□□□ -0.92
CACNA1C-227ENST00000491104 FLNCQ14315 2725 aa9.29□□□□□ -0.92
CACNA1C-227ENST00000491104 EFCAB10A6NFE3 127 aa9.29□□□□□ -0.92
CACNA1C-227ENST00000491104 PTGES3LE9PB15 166 aa9.29□□□□□ -0.92
CACNA1C-227ENST00000491104 M0R135 149 aa9.29□□□□□ -0.92
CACNA1C-227ENST00000491104 PHYHO14832 338 aa9.29□□□□□ -0.92
CACNA1C-227ENST00000491104 SMPD2O60906 423 aa9.29□□□□□ -0.92
CACNA1C-227ENST00000491104 CTAG2O75638 210 aa9.29□□□□□ -0.92
CACNA1C-227ENST00000491104 RPP14O95059 124 aaKnown RBP9.29□□□□□ -0.92
CACNA1C-227ENST00000491104 FADS2O95864 444 aaKnown RBP9.29□□□□□ -0.92
CACNA1C-227ENST00000491104 ABHD16AO95870 558 aa9.29□□□□□ -0.92
CACNA1C-227ENST00000491104 NGFP01138 241 aa9.29□□□□□ -0.92
CACNA1C-227ENST00000491104 ACSM4P0C7M7 580 aa9.29□□□□□ -0.92
CACNA1C-227ENST00000491104 HSD11B1P28845 292 aa9.29□□□□□ -0.92
CACNA1C-227ENST00000491104 PSMB10P40306 273 aa9.29□□□□□ -0.92
CACNA1C-227ENST00000491104 ETV1P50549 477 aa9.29□□□□□ -0.92
CACNA1C-227ENST00000491104 PRSS12P56730 875 aa9.29□□□□□ -0.92
CACNA1C-227ENST00000491104 GRB2P62993 217 aaKnown RBP9.29□□□□□ -0.92
CACNA1C-227ENST00000491104 ACTC1P68032 377 aa9.29□□□□□ -0.92
CACNA1C-227ENST00000491104 ACTA1P68133 377 aa9.29□□□□□ -0.92
CACNA1C-227ENST00000491104 TLE4Q04727 773 aa9.29□□□□□ -0.92
CACNA1C-227ENST00000491104 ST3GAL4Q11206 333 aa9.29□□□□□ -0.92
CACNA1C-227ENST00000491104 MED21Q13503 144 aa9.29□□□□□ -0.92
CACNA1C-227ENST00000491104 MSMPQ1L6U9 139 aa9.29□□□□□ -0.92
CACNA1C-227ENST00000491104 KLHL22Q53GT1 634 aa9.29□□□□□ -0.92
CACNA1C-227ENST00000491104 SPATA46Q5T0L3 261 aa9.29□□□□□ -0.92
CACNA1C-227ENST00000491104 KCTD18Q6PI47 426 aaPredicted RBP9.29□□□□□ -0.92
CACNA1C-227ENST00000491104 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.29□□□□□ -0.92
CACNA1C-227ENST00000491104 STX19Q8N4C7 294 aa9.29□□□□□ -0.92
CACNA1C-227ENST00000491104 ACBD7Q8N6N7 88 aa9.29□□□□□ -0.92
CACNA1C-227ENST00000491104 YIPF7Q8N8F6 280 aa9.29□□□□□ -0.92
CACNA1C-227ENST00000491104 ABHD4Q8TB40 342 aa9.29□□□□□ -0.92
CACNA1C-227ENST00000491104 ASB17Q8WXJ9 295 aa9.29□□□□□ -0.92
CACNA1C-227ENST00000491104 AKAP1Q92667 903 aaKnown RBP eCLIP9.29□□□□□ -0.92
CACNA1C-227ENST00000491104 ZNF799Q96GE5 643 aa9.29□□□□□ -0.92
CACNA1C-227ENST00000491104 TMEM80Q96HE8 168 aa9.29□□□□□ -0.92
CACNA1C-227ENST00000491104 C4orf45Q96LM5 186 aa9.29□□□□□ -0.92
CACNA1C-227ENST00000491104 MNTQ99583 582 aa9.29□□□□□ -0.92
CACNA1C-227ENST00000491104 ZNF649Q9BS31 505 aa9.29□□□□□ -0.92
CACNA1C-227ENST00000491104 ALG8Q9BVK2 526 aa9.29□□□□□ -0.92
CACNA1C-227ENST00000491104 BRD7Q9NPI1 651 aa9.29□□□□□ -0.92
CACNA1C-227ENST00000491104 FKBP14Q9NWM8 211 aa9.29□□□□□ -0.92
CACNA1C-227ENST00000491104 ERVK13-1Q9NX77 482 aa9.29□□□□□ -0.92
CACNA1C-227ENST00000491104 SCN3BQ9NY72 215 aa9.29□□□□□ -0.92
CACNA1C-227ENST00000491104 CNOT2Q9NZN8 540 aaKnown RBP9.29□□□□□ -0.92
CACNA1C-227ENST00000491104 ERVK-18Q9QC07 812 aa9.29□□□□□ -0.92
CACNA1C-227ENST00000491104 CLEC2DQ9UHP7 191 aa9.29□□□□□ -0.92
CACNA1C-227ENST00000491104 ATPIF1Q9UII2 106 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms