RNA–Protein interactions for RNA: ENST00000488964.5

CYTH3-209, Transcript of cytohesin 3, humanhuman

TSL 4

Gene CYTH3, Length 606 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH3-209ENST00000488964 CLPTM1O96005 669 aa12.91□□□□□ -0.34
CYTH3-209ENST00000488964 TFP02787 698 aa12.91□□□□□ -0.34
CYTH3-209ENST00000488964 SPARCP09486 303 aa12.91□□□□□ -0.34
CYTH3-209ENST00000488964 PRR23D2P0DMB1 279 aaPredicted RBP12.91□□□□□ -0.34
CYTH3-209ENST00000488964 SPI1P17947 270 aa12.91□□□□□ -0.34
CYTH3-209ENST00000488964 NR4A2P43354 598 aa12.91□□□□□ -0.34
CYTH3-209ENST00000488964 TPTEP56180 551 aa12.91□□□□□ -0.34
CYTH3-209ENST00000488964 GGTLC2Q14390 218 aa12.91□□□□□ -0.34
CYTH3-209ENST00000488964 GINS1Q14691 196 aa12.91□□□□□ -0.34
CYTH3-209ENST00000488964 TAF13Q15543 124 aa12.91□□□□□ -0.34
CYTH3-209ENST00000488964 MSMPQ1L6U9 139 aa12.91□□□□□ -0.34
CYTH3-209ENST00000488964 SLC18B1Q6NT16 456 aa12.91□□□□□ -0.34
CYTH3-209ENST00000488964 TMEM179BQ7Z7N9 219 aa12.91□□□□□ -0.34
CYTH3-209ENST00000488964 LINC00346Q8IVM7 164 aa12.91□□□□□ -0.34
CYTH3-209ENST00000488964 ZCCHC24Q8N2G6 241 aaKnown RBP12.91□□□□□ -0.34
CYTH3-209ENST00000488964 PARP8Q8N3A8 854 aa12.91□□□□□ -0.34
CYTH3-209ENST00000488964 SLCO4A1Q96BD0 722 aa12.91□□□□□ -0.34
CYTH3-209ENST00000488964 DUS3LQ96G46 650 aaKnown RBP12.91□□□□□ -0.34
CYTH3-209ENST00000488964 RAB3IPQ96QF0 476 aaPredicted RBP12.91□□□□□ -0.34
CYTH3-209ENST00000488964 SMR3AQ99954 134 aa12.91□□□□□ -0.34
CYTH3-209ENST00000488964 SAP30LQ9HAJ7 183 aa12.91□□□□□ -0.34
CYTH3-209ENST00000488964 ZDHHC8Q9ULC8 765 aa12.91□□□□□ -0.34
CYTH3-209ENST00000488964 COMMD3-BMI1R4GMX3 469 aa12.91□□□□□ -0.34
CYTH3-209ENST00000488964 CHD3Q12873 2000 aaKnown RBP12.91□□□□□ -0.34
CYTH3-209ENST00000488964 VPS13CQ709C8 3753 aa12.9□□□□□ -0.34
CYTH3-209ENST00000488964 TLX2O43763 284 aaPredicted RBP12.9□□□□□ -0.34
CYTH3-209ENST00000488964 IGFBP1P08833 259 aaPredicted RBP12.9□□□□□ -0.34
CYTH3-209ENST00000488964 SELEP16581 610 aa12.9□□□□□ -0.34
CYTH3-209ENST00000488964 ACHEP22303 614 aa12.9□□□□□ -0.34
CYTH3-209ENST00000488964 PRKACGP22612 351 aa12.9□□□□□ -0.34
CYTH3-209ENST00000488964 SLC15A1P46059 708 aa12.9□□□□□ -0.34
CYTH3-209ENST00000488964 GZMKP49863 264 aa12.9□□□□□ -0.34
CYTH3-209ENST00000488964 ESRRGP62508 458 aa12.9□□□□□ -0.34
CYTH3-209ENST00000488964 HIST1H3AP68431 136 aa12.9□□□□□ -0.34
CYTH3-209ENST00000488964 HIST2H3PS2Q5TEC6 136 aa12.9□□□□□ -0.34
CYTH3-209ENST00000488964 OTPQ5XKR4 325 aa12.9□□□□□ -0.34
CYTH3-209ENST00000488964 ZFP1Q6P2D0 407 aa12.9□□□□□ -0.34
CYTH3-209ENST00000488964 HIST2H3AQ71DI3 136 aa12.9□□□□□ -0.34
CYTH3-209ENST00000488964 ASRGL1Q7L266 308 aa12.9□□□□□ -0.34
CYTH3-209ENST00000488964 SHFQ7M4L6 423 aa12.9□□□□□ -0.34
CYTH3-209ENST00000488964 HS3ST5Q8IZT8 346 aa12.9□□□□□ -0.34
CYTH3-209ENST00000488964 IQCF1Q8N6M8 205 aa12.9□□□□□ -0.34
CYTH3-209ENST00000488964 OR51L1Q8NGJ5 315 aa12.9□□□□□ -0.34
CYTH3-209ENST00000488964 PTP4A1Q93096 173 aa12.9□□□□□ -0.34
CYTH3-209ENST00000488964 UTP4Q969X6 686 aaKnown RBP12.9□□□□□ -0.34
CYTH3-209ENST00000488964 ELMOD3Q96FG2 381 aa12.9□□□□□ -0.34
CYTH3-209ENST00000488964 INTS14Q96SY0 518 aa12.9□□□□□ -0.34
CYTH3-209ENST00000488964 COPS4Q9BT78 406 aa12.9□□□□□ -0.34
CYTH3-209ENST00000488964 HCAR1Q9BXC0 346 aa12.9□□□□□ -0.34
CYTH3-209ENST00000488964 SLC25A19Q9HC21 320 aa12.9□□□□□ -0.34
CYTH3-209ENST00000488964 KRT84Q9NSB2 600 aa12.9□□□□□ -0.34
CYTH3-209ENST00000488964 TVP23AA6NH52 213 aa12.89□□□□□ -0.35
CYTH3-209ENST00000488964 F5H5K5 113 aa12.89□□□□□ -0.35
CYTH3-209ENST00000488964 SURF4O15260 269 aa12.89□□□□□ -0.35
CYTH3-209ENST00000488964 SPRY3O43610 288 aa12.89□□□□□ -0.35
CYTH3-209ENST00000488964 NGFP01138 241 aa12.89□□□□□ -0.35
CYTH3-209ENST00000488964 APOC1P02654 83 aa12.89□□□□□ -0.35
CYTH3-209ENST00000488964 RAC2P15153 192 aa12.89□□□□□ -0.35
CYTH3-209ENST00000488964 GIFP27352 417 aa12.89□□□□□ -0.35
CYTH3-209ENST00000488964 GGT2P36268 569 aa12.89□□□□□ -0.35
CYTH3-209ENST00000488964 MPV17P39210 176 aa12.89□□□□□ -0.35
CYTH3-209ENST00000488964 SLC6A9P48067 706 aa12.89□□□□□ -0.35
CYTH3-209ENST00000488964 CHN2P52757 468 aa12.89□□□□□ -0.35
CYTH3-209ENST00000488964 RPS7P62081 194 aaKnown RBP12.89□□□□□ -0.35
CYTH3-209ENST00000488964 SLC3A1Q07837 685 aa12.89□□□□□ -0.35
CYTH3-209ENST00000488964 CCNIQ14094 377 aa12.89□□□□□ -0.35
CYTH3-209ENST00000488964 TMEM249Q2WGJ8 235 aa12.89□□□□□ -0.35
CYTH3-209ENST00000488964 CFAP77Q6ZQR2 320 aa12.89□□□□□ -0.35
CYTH3-209ENST00000488964 MAPK1IP1LQ8NDC0 245 aa12.89□□□□□ -0.35
CYTH3-209ENST00000488964 OR6N2Q8NGY6 317 aa12.89□□□□□ -0.35
CYTH3-209ENST00000488964 TIMD4Q96H15 378 aa12.89□□□□□ -0.35
CYTH3-209ENST00000488964 CENPNQ96H22 339 aaPredicted RBP12.89□□□□□ -0.35
CYTH3-209ENST00000488964 DDOQ99489 341 aa12.89□□□□□ -0.35
CYTH3-209ENST00000488964 OSBPL10Q9BXB5 764 aa12.89□□□□□ -0.35
CYTH3-209ENST00000488964 NMNAT2Q9BZQ4 307 aa12.89□□□□□ -0.35
CYTH3-209ENST00000488964 BPESC1Q9GZL8 116 aa12.89□□□□□ -0.35
CYTH3-209ENST00000488964 OR51V1Q9H2C8 321 aa12.89□□□□□ -0.35
CYTH3-209ENST00000488964 SP140LQ9H930 580 aa12.89□□□□□ -0.35
CYTH3-209ENST00000488964 MRPL22Q9NWU5 206 aaKnown RBP12.89□□□□□ -0.35
CYTH3-209ENST00000488964 CR1P17927 2039 aa12.89□□□□□ -0.35
CYTH3-209ENST00000488964 ZNF878C9JN71 531 aa12.88□□□□□ -0.35
CYTH3-209ENST00000488964 M0R135 149 aa12.88□□□□□ -0.35
CYTH3-209ENST00000488964 ZNF593O00488 134 aaPredicted RBP12.88□□□□□ -0.35
CYTH3-209ENST00000488964 PRODHO43272 600 aa12.88□□□□□ -0.35
CYTH3-209ENST00000488964 CD5LO43866 347 aa12.88□□□□□ -0.35
CYTH3-209ENST00000488964 GLCEO94923 617 aa12.88□□□□□ -0.35
CYTH3-209ENST00000488964 GYPBP06028 91 aa12.88□□□□□ -0.35
CYTH3-209ENST00000488964 DBHP09172 617 aa12.88□□□□□ -0.35
CYTH3-209ENST00000488964 GSTT1P30711 240 aa12.88□□□□□ -0.35
CYTH3-209ENST00000488964 GPR6P46095 362 aaPredicted RBP12.88□□□□□ -0.35
CYTH3-209ENST00000488964 CRISP1P54107 249 aa12.88□□□□□ -0.35
CYTH3-209ENST00000488964 TMEM33P57088 247 aa12.88□□□□□ -0.35
CYTH3-209ENST00000488964 GRB2P62993 217 aaKnown RBP12.88□□□□□ -0.35
CYTH3-209ENST00000488964 CDK5Q00535 292 aa12.88□□□□□ -0.35
CYTH3-209ENST00000488964 SNAPC1Q16533 368 aa12.88□□□□□ -0.35
CYTH3-209ENST00000488964 TSTQ16762 297 aaKnown RBP12.88□□□□□ -0.35
CYTH3-209ENST00000488964 HFEQ30201 348 aa12.88□□□□□ -0.35
CYTH3-209ENST00000488964 KLHL12Q53G59 568 aa12.88□□□□□ -0.35
CYTH3-209ENST00000488964 TEX30Q5JUR7 227 aa12.88□□□□□ -0.35
CYTH3-209ENST00000488964 SLC35D3Q5M8T2 416 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms