RNA–Protein interactions for RNA: ENST00000488035.5

R3HDM1-219, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-219ENST00000488035 CHP1Q99653 195 aa1.59□□□□□ -2.15
R3HDM1-219ENST00000488035 ANKRD60Q9BZ19 345 aa1.59□□□□□ -2.15
R3HDM1-219ENST00000488035 SLC7A5P2Q9GIP4 190 aa1.59□□□□□ -2.15
R3HDM1-219ENST00000488035 PARP12Q9H0J9 701 aaKnown RBP1.59□□□□□ -2.15
R3HDM1-219ENST00000488035 OR52D1Q9H346 318 aa1.59□□□□□ -2.15
R3HDM1-219ENST00000488035 SLC38A10Q9HBR0 1119 aa1.59□□□□□ -2.15
R3HDM1-219ENST00000488035 HMG20AQ9NP66 347 aa1.59□□□□□ -2.15
R3HDM1-219ENST00000488035 CTSFQ9UBX1 484 aa1.59□□□□□ -2.15
R3HDM1-219ENST00000488035 RFNGQ9Y644 331 aa1.59□□□□□ -2.15
R3HDM1-219ENST00000488035 A0A075B6Q4 140 aa1.58□□□□□ -2.16
R3HDM1-219ENST00000488035 LYRM9A8MSI8 78 aa1.58□□□□□ -2.16
R3HDM1-219ENST00000488035 K7EM74 188 aa1.58□□□□□ -2.16
R3HDM1-219ENST00000488035 DNASE2O00115 360 aaPredicted RBP1.58□□□□□ -2.16
R3HDM1-219ENST00000488035 RAD51CO43502 376 aa1.58□□□□□ -2.16
R3HDM1-219ENST00000488035 HUS1O60921 280 aa1.58□□□□□ -2.16
R3HDM1-219ENST00000488035 AQP8O94778 261 aa1.58□□□□□ -2.16
R3HDM1-219ENST00000488035 MPZL1O95297 269 aa1.58□□□□□ -2.16
R3HDM1-219ENST00000488035 AGTP01019 485 aa1.58□□□□□ -2.16
R3HDM1-219ENST00000488035 APCSP02743 223 aa1.58□□□□□ -2.16
R3HDM1-219ENST00000488035 CTSLP07711 333 aa1.58□□□□□ -2.16
R3HDM1-219ENST00000488035 OR8U9P0C7N5 309 aa1.58□□□□□ -2.16
R3HDM1-219ENST00000488035 OR56A5P0C7T3 313 aa1.58□□□□□ -2.16
R3HDM1-219ENST00000488035 MYL2P10916 166 aa1.58□□□□□ -2.16
R3HDM1-219ENST00000488035 STOMP27105 288 aa1.58□□□□□ -2.16
R3HDM1-219ENST00000488035 BMI1P35226 326 aa1.58□□□□□ -2.16
R3HDM1-219ENST00000488035 NBL1P41271 181 aa1.58□□□□□ -2.16
R3HDM1-219ENST00000488035 SYKP43405 635 aa1.58□□□□□ -2.16
R3HDM1-219ENST00000488035 UQCRFS1P47985 274 aa1.58□□□□□ -2.16
R3HDM1-219ENST00000488035 HCAR3P49019 387 aa1.58□□□□□ -2.16
R3HDM1-219ENST00000488035 SLC11A1P49279 550 aa1.58□□□□□ -2.16
R3HDM1-219ENST00000488035 CDKN2DP55273 166 aa1.58□□□□□ -2.16
R3HDM1-219ENST00000488035 C21orf59P57076 290 aa1.58□□□□□ -2.16
R3HDM1-219ENST00000488035 RGS8P57771 180 aaPredicted RBP1.58□□□□□ -2.16
R3HDM1-219ENST00000488035 UBE2MP61081 183 aaKnown RBP1.58□□□□□ -2.16
R3HDM1-219ENST00000488035 UBE2NP61088 152 aaKnown RBP1.58□□□□□ -2.16
R3HDM1-219ENST00000488035 GBE1Q04446 702 aa1.58□□□□□ -2.16
R3HDM1-219ENST00000488035 ZNF266Q14584 549 aa1.58□□□□□ -2.16
R3HDM1-219ENST00000488035 IRF4Q15306 451 aa1.58□□□□□ -2.16
R3HDM1-219ENST00000488035 SF3A2Q15428 464 aaKnown RBP1.58□□□□□ -2.16
R3HDM1-219ENST00000488035 PSMD5Q16401 504 aa1.58□□□□□ -2.16
R3HDM1-219ENST00000488035 SPANXN2Q5MJ10 180 aa1.58□□□□□ -2.16
R3HDM1-219ENST00000488035 ZNF880Q6PDB4 577 aa1.58□□□□□ -2.16
R3HDM1-219ENST00000488035 SCD5Q86SK9 330 aa1.58□□□□□ -2.16
R3HDM1-219ENST00000488035 CDKL3Q8IVW4 592 aaPredicted RBP1.58□□□□□ -2.16
R3HDM1-219ENST00000488035 WDFY1Q8IWB7 410 aa1.58□□□□□ -2.16
R3HDM1-219ENST00000488035 UBALD2Q8IYN6 164 aa1.58□□□□□ -2.16
R3HDM1-219ENST00000488035 PRSS58Q8IYP2 241 aa1.58□□□□□ -2.16
R3HDM1-219ENST00000488035 GPR26Q8NDV2 337 aa1.58□□□□□ -2.16
R3HDM1-219ENST00000488035 OR4C5Q8NGB2 326 aa1.58□□□□□ -2.16
R3HDM1-219ENST00000488035 OR4K5Q8NGD3 323 aa1.58□□□□□ -2.16
R3HDM1-219ENST00000488035 OR56A4Q8NGH8 313 aa1.58□□□□□ -2.16
R3HDM1-219ENST00000488035 OR9G4Q8NGQ1 327 aa1.58□□□□□ -2.16
R3HDM1-219ENST00000488035 COQ8AQ8NI60 647 aa1.58□□□□□ -2.16
R3HDM1-219ENST00000488035 FAM81AQ8TBF8 368 aa1.58□□□□□ -2.16
R3HDM1-219ENST00000488035 APH1BQ8WW43 257 aa1.58□□□□□ -2.16
R3HDM1-219ENST00000488035 TMEM230Q96A57 120 aa1.58□□□□□ -2.16
R3HDM1-219ENST00000488035 NARS2Q96I59 477 aaKnown RBP1.58□□□□□ -2.16
R3HDM1-219ENST00000488035 DNAJC1Q96KC8 554 aaKnown RBP1.58□□□□□ -2.16
R3HDM1-219ENST00000488035 RNF145Q96MT1 663 aa1.58□□□□□ -2.16
R3HDM1-219ENST00000488035 ZNF382Q96SR6 550 aa1.58□□□□□ -2.16
R3HDM1-219ENST00000488035 SPIN2AQ99865 258 aa1.58□□□□□ -2.16
R3HDM1-219ENST00000488035 SPIN2BQ9BPZ2 258 aa1.58□□□□□ -2.16
R3HDM1-219ENST00000488035 BPIFA3Q9BQP9 254 aa1.58□□□□□ -2.16
R3HDM1-219ENST00000488035 SCRT1Q9BWW7 348 aa1.58□□□□□ -2.16
R3HDM1-219ENST00000488035 UCK2Q9BZX2 261 aa1.58□□□□□ -2.16
R3HDM1-219ENST00000488035 ACTR3CQ9C0K3 210 aaPredicted RBP1.58□□□□□ -2.16
R3HDM1-219ENST00000488035 TMEM38AQ9H6F2 299 aa1.58□□□□□ -2.16
R3HDM1-219ENST00000488035 RAB20Q9NX57 234 aa1.58□□□□□ -2.16
R3HDM1-219ENST00000488035 TMEM14AQ9Y6G1 99 aa1.58□□□□□ -2.16
R3HDM1-219ENST00000488035 COMMD3-BMI1R4GMX3 469 aa1.58□□□□□ -2.16
R3HDM1-219ENST00000488035 UBN2Q6ZU65 1347 aa1.58□□□□□ -2.16
R3HDM1-219ENST00000488035 COL27A1Q8IZC6 1860 aaPredicted RBP1.58□□□□□ -2.16
R3HDM1-219ENST00000488035 YEATS2Q9ULM3 1422 aa1.57□□□□□ -2.16
R3HDM1-219ENST00000488035 SERTM2A0A1B0GWG4 89 aa1.57□□□□□ -2.16
R3HDM1-219ENST00000488035 A0A1W2PQ67 120 aa1.57□□□□□ -2.16
R3HDM1-219ENST00000488035 H0YJW9 148 aa1.57□□□□□ -2.16
R3HDM1-219ENST00000488035 GABRPO00591 440 aa1.57□□□□□ -2.16
R3HDM1-219ENST00000488035 PLPP1O14494 284 aa1.57□□□□□ -2.16
R3HDM1-219ENST00000488035 SOCS1O15524 211 aa1.57□□□□□ -2.16
R3HDM1-219ENST00000488035 NMT2O60551 498 aa1.57□□□□□ -2.16
R3HDM1-219ENST00000488035 YIF1AO95070 293 aa1.57□□□□□ -2.16
R3HDM1-219ENST00000488035 VAMP5O95183 116 aa1.57□□□□□ -2.16
R3HDM1-219ENST00000488035 ERCC1P07992 297 aaPredicted RBP1.57□□□□□ -2.16
R3HDM1-219ENST00000488035 ERGP11308 486 aa1.57□□□□□ -2.16
R3HDM1-219ENST00000488035 CTRB1P17538 263 aa1.57□□□□□ -2.16
R3HDM1-219ENST00000488035 DTYMKP23919 212 aa1.57□□□□□ -2.16
R3HDM1-219ENST00000488035 LOXP28300 417 aaPredicted RBP1.57□□□□□ -2.16
R3HDM1-219ENST00000488035 P2RX1P51575 399 aa1.57□□□□□ -2.16
R3HDM1-219ENST00000488035 KRTAP10-10P60014 251 aa1.57□□□□□ -2.16
R3HDM1-219ENST00000488035 RPS23P62266 143 aaKnown RBP1.57□□□□□ -2.16
R3HDM1-219ENST00000488035 SEMG2Q02383 582 aa1.57□□□□□ -2.16
R3HDM1-219ENST00000488035 IRF8Q02556 426 aa1.57□□□□□ -2.16
R3HDM1-219ENST00000488035 CDC20Q12834 499 aa1.57□□□□□ -2.16
R3HDM1-219ENST00000488035 MERTKQ12866 999 aa1.57□□□□□ -2.16
R3HDM1-219ENST00000488035 ITIH4Q14624 930 aa1.57□□□□□ -2.16
R3HDM1-219ENST00000488035 AVPI1Q5T686 147 aa1.57□□□□□ -2.16
R3HDM1-219ENST00000488035 TMEM53Q6P2H8 277 aa1.57□□□□□ -2.16
R3HDM1-219ENST00000488035 NPSR1Q6W5P4 371 aa1.57□□□□□ -2.16
R3HDM1-219ENST00000488035 SHISA6Q6ZSJ9 500 aa1.57□□□□□ -2.16
R3HDM1-219ENST00000488035 MBOAT2Q6ZWT7 520 aa1.57□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms