RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 GPA33Q99795 319 aa10.26□□□□□ -0.77
VPS16-208ENST00000487461 NDEL1Q9GZM8 345 aa10.26□□□□□ -0.77
VPS16-208ENST00000487461 PPP1R3CQ9UQK1 317 aa10.26□□□□□ -0.77
VPS16-208ENST00000487461 FAM32AQ9Y421 112 aaKnown RBP10.26□□□□□ -0.77
VPS16-208ENST00000487461 TANC2Q9HCD6 1990 aa10.25□□□□□ -0.77
VPS16-208ENST00000487461 UNC119BA6NIH7 251 aa10.25□□□□□ -0.77
VPS16-208ENST00000487461 F5H0A9 414 aaPredicted RBP10.25□□□□□ -0.77
VPS16-208ENST00000487461 H0YL77 283 aa10.25□□□□□ -0.77
VPS16-208ENST00000487461 TMEM178BH3BS89 294 aa10.25□□□□□ -0.77
VPS16-208ENST00000487461 DCTN6O00399 190 aa10.25□□□□□ -0.77
VPS16-208ENST00000487461 SURF4O15260 269 aa10.25□□□□□ -0.77
VPS16-208ENST00000487461 DIRAS1O95057 198 aa10.25□□□□□ -0.77
VPS16-208ENST00000487461 TXNDC12O95881 172 aa10.25□□□□□ -0.77
VPS16-208ENST00000487461 WNT2P09544 360 aa10.25□□□□□ -0.77
VPS16-208ENST00000487461 RHCEP18577 417 aa10.25□□□□□ -0.77
VPS16-208ENST00000487461 PSME3P61289 254 aa10.25□□□□□ -0.77
VPS16-208ENST00000487461 HIST1H3AP68431 136 aa10.25□□□□□ -0.77
VPS16-208ENST00000487461 DBPQ10586 325 aaPredicted RBP10.25□□□□□ -0.77
VPS16-208ENST00000487461 MEP1BQ16820 701 aa10.25□□□□□ -0.77
VPS16-208ENST00000487461 RSPO1Q2MKA7 263 aaPredicted RBP10.25□□□□□ -0.77
VPS16-208ENST00000487461 AWAT1Q58HT5 328 aa10.25□□□□□ -0.77
VPS16-208ENST00000487461 FGD3Q5JSP0 725 aa10.25□□□□□ -0.77
VPS16-208ENST00000487461 KLF17Q5JT82 389 aaPredicted RBP10.25□□□□□ -0.77
VPS16-208ENST00000487461 HIST2H3PS2Q5TEC6 136 aa10.25□□□□□ -0.77
VPS16-208ENST00000487461 GLYATQ6IB77 296 aa10.25□□□□□ -0.77
VPS16-208ENST00000487461 OR2T2Q6IF00 324 aa10.25□□□□□ -0.77
VPS16-208ENST00000487461 FBXW12Q6X9E4 464 aa10.25□□□□□ -0.77
VPS16-208ENST00000487461 HIST2H3AQ71DI3 136 aa10.25□□□□□ -0.77
VPS16-208ENST00000487461 BCL6BQ8N143 479 aaPredicted RBP10.25□□□□□ -0.77
VPS16-208ENST00000487461 SIGLECL1Q8N7X8 197 aa10.25□□□□□ -0.77
VPS16-208ENST00000487461 OR52J3Q8NH60 311 aa10.25□□□□□ -0.77
VPS16-208ENST00000487461 RSRC1Q96IZ7 334 aaKnown RBP10.25□□□□□ -0.77
VPS16-208ENST00000487461 FUZQ9BT04 418 aa10.25□□□□□ -0.77
VPS16-208ENST00000487461 NTN4Q9HB63 628 aa10.25□□□□□ -0.77
VPS16-208ENST00000487461 TMEM165Q9HC07 324 aa10.25□□□□□ -0.77
VPS16-208ENST00000487461 GCM1Q9NP62 436 aa10.25□□□□□ -0.77
VPS16-208ENST00000487461 DCAF13Q9NV06 445 aaKnown RBP10.25□□□□□ -0.77
VPS16-208ENST00000487461 PTTG3PQ9NZH4 202 aa10.25□□□□□ -0.77
VPS16-208ENST00000487461 ZNF69Q9UC07 566 aa10.25□□□□□ -0.77
VPS16-208ENST00000487461 RPS6KA6Q9UK32 745 aa10.25□□□□□ -0.77
VPS16-208ENST00000487461 NUP50Q9UKX7 468 aa10.25□□□□□ -0.77
VPS16-208ENST00000487461 PPIAL4AQ9Y536 164 aa10.25□□□□□ -0.77
VPS16-208ENST00000487461 INSIG2Q9Y5U4 225 aa10.25□□□□□ -0.77
VPS16-208ENST00000487461 AUP1Q9Y679 476 aa10.25□□□□□ -0.77
VPS16-208ENST00000487461 A8MXK9 166 aa10.24□□□□□ -0.77
VPS16-208ENST00000487461 NDUFAB1O14561 156 aa10.24□□□□□ -0.77
VPS16-208ENST00000487461 SPRY1O43609 319 aaPredicted RBP10.24□□□□□ -0.77
VPS16-208ENST00000487461 ZNF205O95201 554 aa10.24□□□□□ -0.77
VPS16-208ENST00000487461 MDH1P40925 334 aaKnown RBP10.24□□□□□ -0.77
VPS16-208ENST00000487461 MDH2P40926 338 aaKnown RBP10.24□□□□□ -0.77
VPS16-208ENST00000487461 CENPAP49450 140 aa10.24□□□□□ -0.77
VPS16-208ENST00000487461 NUDT2P50583 147 aa10.24□□□□□ -0.77
VPS16-208ENST00000487461 MMP16P51512 607 aa10.24□□□□□ -0.77
VPS16-208ENST00000487461 RPS6KA3P51812 740 aa10.24□□□□□ -0.77
VPS16-208ENST00000487461 HSP90B2PQ58FF3 399 aa10.24□□□□□ -0.77
VPS16-208ENST00000487461 SLC27A4Q6P1M0 643 aa10.24□□□□□ -0.77
VPS16-208ENST00000487461 CORO6Q6QEF8 472 aa10.24□□□□□ -0.77
VPS16-208ENST00000487461 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.24□□□□□ -0.77
VPS16-208ENST00000487461 ADCK1Q86TW2 530 aa10.24□□□□□ -0.77
VPS16-208ENST00000487461 FAM86B1Q8N7N1 296 aa10.24□□□□□ -0.77
VPS16-208ENST00000487461 OR8G5Q8NG78 346 aa10.24□□□□□ -0.77
VPS16-208ENST00000487461 OR10AD1Q8NGE0 317 aa10.24□□□□□ -0.77
VPS16-208ENST00000487461 OR5L1Q8NGL2 311 aa10.24□□□□□ -0.77
VPS16-208ENST00000487461 ZNF420Q8TAQ5 688 aaPredicted RBP10.24□□□□□ -0.77
VPS16-208ENST00000487461 MEGF10Q96KG7 1140 aa10.24□□□□□ -0.77
VPS16-208ENST00000487461 DHRS1Q96LJ7 313 aa10.24□□□□□ -0.77
VPS16-208ENST00000487461 C1QTNF5Q9BXJ0 243 aa10.24□□□□□ -0.77
VPS16-208ENST00000487461 SRA1Q9HD15 236 aaKnown RBP10.24□□□□□ -0.77
VPS16-208ENST00000487461 DDX28Q9NUL7 540 aaKnown RBP10.24□□□□□ -0.77
VPS16-208ENST00000487461 ABCD2Q9UBJ2 740 aa10.24□□□□□ -0.77
VPS16-208ENST00000487461 B9D1Q9UPM9 204 aa10.24□□□□□ -0.77
VPS16-208ENST00000487461 AURKCQ9UQB9 309 aa10.24□□□□□ -0.77
VPS16-208ENST00000487461 LHFPL6Q9Y693 200 aa10.24□□□□□ -0.77
VPS16-208ENST00000487461 IGLV1-36A0A0B4J1U3 117 aa10.23□□□□□ -0.77
VPS16-208ENST00000487461 IGHV3-64DA0A0J9YX35 117 aa10.23□□□□□ -0.77
VPS16-208ENST00000487461 CEACAM18A8MTB9 384 aa10.23□□□□□ -0.77
VPS16-208ENST00000487461 J3QW42 95 aa10.23□□□□□ -0.77
VPS16-208ENST00000487461 PPP1R3DO95685 299 aa10.23□□□□□ -0.77
VPS16-208ENST00000487461 CYB5R3P00387 301 aaPredicted RBP10.23□□□□□ -0.77
VPS16-208ENST00000487461 CRABP1P29762 137 aa10.23□□□□□ -0.77
VPS16-208ENST00000487461 CD80P33681 288 aa10.23□□□□□ -0.77
VPS16-208ENST00000487461 PMELP40967 661 aa10.23□□□□□ -0.77
VPS16-208ENST00000487461 RGS6P49758 472 aa10.23□□□□□ -0.77
VPS16-208ENST00000487461 PAX2Q02962 417 aa10.23□□□□□ -0.77
VPS16-208ENST00000487461 PAX8Q06710 450 aa10.23□□□□□ -0.77
VPS16-208ENST00000487461 RFX4Q33E94 735 aa10.23□□□□□ -0.77
VPS16-208ENST00000487461 KRTAP27-1Q3LI81 207 aa10.23□□□□□ -0.77
VPS16-208ENST00000487461 ESCO2Q56NI9 601 aa10.23□□□□□ -0.77
VPS16-208ENST00000487461 ARMCX4Q5H9R4 360 aa10.23□□□□□ -0.77
VPS16-208ENST00000487461 SMARCD3Q6STE5 483 aa10.23□□□□□ -0.77
VPS16-208ENST00000487461 RBMS3Q6XE24 437 aaKnown RBP10.23□□□□□ -0.77
VPS16-208ENST00000487461 DOK3Q7L591 496 aa10.23□□□□□ -0.77
VPS16-208ENST00000487461 OR6V1Q8N148 313 aa10.23□□□□□ -0.77
VPS16-208ENST00000487461 GJC3Q8NFK1 279 aa10.23□□□□□ -0.77
VPS16-208ENST00000487461 OR13G1Q8NGZ3 307 aa10.23□□□□□ -0.77
VPS16-208ENST00000487461 SGMS2Q8NHU3 365 aa10.23□□□□□ -0.77
VPS16-208ENST00000487461 APOBEC3DQ96AK3 386 aaPredicted RBP10.23□□□□□ -0.77
VPS16-208ENST00000487461 ZMYND19Q96E35 227 aaPredicted RBP10.23□□□□□ -0.77
VPS16-208ENST00000487461 ZNF48Q96MX3 618 aaPredicted RBP10.23□□□□□ -0.77
VPS16-208ENST00000487461 ZNF582Q96NG8 517 aaPredicted RBP10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms