RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 SLC7A6Q92536 515 aa11.1□□□□□ -0.63
HDAC6-229ENST00000486665 MYDGFQ969H8 173 aa11.1□□□□□ -0.63
HDAC6-229ENST00000486665 MUCL1Q96DR8 90 aa11.1□□□□□ -0.63
HDAC6-229ENST00000486665 MS4A3Q96HJ5 214 aa11.1□□□□□ -0.63
HDAC6-229ENST00000486665 MNTQ99583 582 aa11.1□□□□□ -0.63
HDAC6-229ENST00000486665 CENPMQ9NSP4 180 aa11.1□□□□□ -0.63
HDAC6-229ENST00000486665 ERVK13-1Q9NX77 482 aa11.1□□□□□ -0.63
HDAC6-229ENST00000486665 SLCO1C1Q9NYB5 712 aa11.1□□□□□ -0.63
HDAC6-229ENST00000486665 CRNNQ9UBG3 495 aaPredicted RBP11.1□□□□□ -0.63
HDAC6-229ENST00000486665 DIMT1Q9UNQ2 313 aaKnown RBP11.1□□□□□ -0.63
HDAC6-229ENST00000486665 TMEM14AQ9Y6G1 99 aa11.1□□□□□ -0.63
HDAC6-229ENST00000486665 NIPBLQ6KC79 2804 aaeCLIP11.09□□□□□ -0.63
HDAC6-229ENST00000486665 LOC100509620A0A075B734 347 aa11.09□□□□□ -0.63
HDAC6-229ENST00000486665 IGHV1-18A0A0C4DH31 117 aa11.09□□□□□ -0.63
HDAC6-229ENST00000486665 OR6C6A6NF89 314 aa11.09□□□□□ -0.63
HDAC6-229ENST00000486665 DOK2O60496 412 aa11.09□□□□□ -0.63
HDAC6-229ENST00000486665 IGKV3-15P01624 115 aa11.09□□□□□ -0.63
HDAC6-229ENST00000486665 IGLV1-44P01699 117 aa11.09□□□□□ -0.63
HDAC6-229ENST00000486665 MT-ND2P03891 347 aa11.09□□□□□ -0.63
HDAC6-229ENST00000486665 SERPINA5P05154 406 aa11.09□□□□□ -0.63
HDAC6-229ENST00000486665 DBHP09172 617 aa11.09□□□□□ -0.63
HDAC6-229ENST00000486665 ZNF14P17017 642 aaPredicted RBP11.09□□□□□ -0.63
HDAC6-229ENST00000486665 APEX1P27695 318 aaKnown RBP11.09□□□□□ -0.63
HDAC6-229ENST00000486665 OPRL1P41146 370 aa11.09□□□□□ -0.63
HDAC6-229ENST00000486665 ZNF83P51522 516 aa11.09□□□□□ -0.63
HDAC6-229ENST00000486665 IDH3GP51553 393 aaPredicted RBP11.09□□□□□ -0.63
HDAC6-229ENST00000486665 RAB35Q15286 201 aa11.09□□□□□ -0.63
HDAC6-229ENST00000486665 ZNF684Q5T5D7 378 aa11.09□□□□□ -0.63
HDAC6-229ENST00000486665 ZNF322Q6U7Q0 402 aaPredicted RBP11.09□□□□□ -0.63
HDAC6-229ENST00000486665 LRRN1Q6UXK5 716 aa11.09□□□□□ -0.63
HDAC6-229ENST00000486665 OR1F12Q8NHA8 337 aa11.09□□□□□ -0.63
HDAC6-229ENST00000486665 NRGNQ92686 78 aa11.09□□□□□ -0.63
HDAC6-229ENST00000486665 OR8B4Q96RC9 309 aa11.09□□□□□ -0.63
HDAC6-229ENST00000486665 SIGLEC11Q96RL6 698 aa11.09□□□□□ -0.63
HDAC6-229ENST00000486665 MED18Q9BUE0 208 aa11.09□□□□□ -0.63
HDAC6-229ENST00000486665 JAM3Q9BX67 310 aa11.09□□□□□ -0.63
HDAC6-229ENST00000486665 ELOVL3Q9HB03 270 aa11.09□□□□□ -0.63
HDAC6-229ENST00000486665 PLEK2Q9NYT0 353 aa11.09□□□□□ -0.63
HDAC6-229ENST00000486665 NDRG3Q9UGV2 375 aa11.09□□□□□ -0.63
HDAC6-229ENST00000486665 MRM2Q9UI43 246 aaKnown RBP11.09□□□□□ -0.63
HDAC6-229ENST00000486665 TRIM64A6NGJ6 449 aa11.08□□□□□ -0.64
HDAC6-229ENST00000486665 TUBAL3A6NHL2 446 aa11.08□□□□□ -0.64
HDAC6-229ENST00000486665 RGS10O43665 173 aa11.08□□□□□ -0.64
HDAC6-229ENST00000486665 CCL2P13500 99 aa11.08□□□□□ -0.64
HDAC6-229ENST00000486665 EEF1B2P24534 225 aaKnown RBP11.08□□□□□ -0.64
HDAC6-229ENST00000486665 HTR5AP47898 357 aa11.08□□□□□ -0.64
HDAC6-229ENST00000486665 OR12D2P58182 307 aa11.08□□□□□ -0.64
HDAC6-229ENST00000486665 GABARAPL2P60520 117 aa11.08□□□□□ -0.64
HDAC6-229ENST00000486665 ACTC1P68032 377 aa11.08□□□□□ -0.64
HDAC6-229ENST00000486665 ACTA1P68133 377 aa11.08□□□□□ -0.64
HDAC6-229ENST00000486665 ROM1Q03395 351 aa11.08□□□□□ -0.64
HDAC6-229ENST00000486665 EGR3Q06889 387 aa11.08□□□□□ -0.64
HDAC6-229ENST00000486665 DOC2BQ14184 412 aa11.08□□□□□ -0.64
HDAC6-229ENST00000486665 GALEQ14376 348 aa11.08□□□□□ -0.64
HDAC6-229ENST00000486665 IRF3Q14653 427 aa11.08□□□□□ -0.64
HDAC6-229ENST00000486665 KRTAP27-1Q3LI81 207 aa11.08□□□□□ -0.64
HDAC6-229ENST00000486665 TP53I3Q53FA7 332 aa11.08□□□□□ -0.64
HDAC6-229ENST00000486665 NAA40Q86UY6 237 aa11.08□□□□□ -0.64
HDAC6-229ENST00000486665 PAQR4Q8N4S7 273 aaPredicted RBP11.08□□□□□ -0.64
HDAC6-229ENST00000486665 FAM169BQ8N8A8 192 aa11.08□□□□□ -0.64
HDAC6-229ENST00000486665 ASB17Q8WXJ9 295 aa11.08□□□□□ -0.64
HDAC6-229ENST00000486665 POM121L2Q96KW2 1035 aa11.08□□□□□ -0.64
HDAC6-229ENST00000486665 NR1H4Q96RI1 486 aaPredicted RBP11.08□□□□□ -0.64
HDAC6-229ENST00000486665 COQ7Q99807 217 aa11.08□□□□□ -0.64
HDAC6-229ENST00000486665 ALG8Q9BVK2 526 aa11.08□□□□□ -0.64
HDAC6-229ENST00000486665 CCDC90BQ9GZT6 254 aa11.08□□□□□ -0.64
HDAC6-229ENST00000486665 ISG20L2Q9H9L3 353 aaKnown RBP11.08□□□□□ -0.64
HDAC6-229ENST00000486665 INPP5EQ9NRR6 644 aa11.08□□□□□ -0.64
HDAC6-229ENST00000486665 DDX28Q9NUL7 540 aaKnown RBP11.08□□□□□ -0.64
HDAC6-229ENST00000486665 BLOC1S6Q9UL45 172 aa11.08□□□□□ -0.64
HDAC6-229ENST00000486665 EXOSC1Q9Y3B2 195 aaKnown RBP11.08□□□□□ -0.64
HDAC6-229ENST00000486665 AKAP6Q13023 2319 aa11.08□□□□□ -0.64
HDAC6-229ENST00000486665 ACANP16112 2415 aa11.07□□□□□ -0.64
HDAC6-229ENST00000486665 IQCMA0A1B0GVH7 501 aa11.07□□□□□ -0.64
HDAC6-229ENST00000486665 DPRXA6NFQ7 191 aa11.07□□□□□ -0.64
HDAC6-229ENST00000486665 METTL15A6NJ78 407 aa11.07□□□□□ -0.64
HDAC6-229ENST00000486665 J3QLW9 94 aa11.07□□□□□ -0.64
HDAC6-229ENST00000486665 M0R1B8 84 aa11.07□□□□□ -0.64
HDAC6-229ENST00000486665 PHYHO14832 338 aa11.07□□□□□ -0.64
HDAC6-229ENST00000486665 ABHD16AO95870 558 aa11.07□□□□□ -0.64
HDAC6-229ENST00000486665 H2BFMP0C1H6 154 aa11.07□□□□□ -0.64
HDAC6-229ENST00000486665 CECR9P0C854 216 aa11.07□□□□□ -0.64
HDAC6-229ENST00000486665 COX5BP10606 129 aa11.07□□□□□ -0.64
HDAC6-229ENST00000486665 ZNF19P17023 458 aa11.07□□□□□ -0.64
HDAC6-229ENST00000486665 CRYGSP22914 178 aa11.07□□□□□ -0.64
HDAC6-229ENST00000486665 STOMP27105 288 aa11.07□□□□□ -0.64
HDAC6-229ENST00000486665 KIR2DL3P43628 341 aa11.07□□□□□ -0.64
HDAC6-229ENST00000486665 MAP2K4P45985 399 aa11.07□□□□□ -0.64
HDAC6-229ENST00000486665 PRKXP51817 358 aa11.07□□□□□ -0.64
HDAC6-229ENST00000486665 HGFACQ04756 655 aa11.07□□□□□ -0.64
HDAC6-229ENST00000486665 PLP2Q04941 152 aa11.07□□□□□ -0.64
HDAC6-229ENST00000486665 TAF13Q15543 124 aa11.07□□□□□ -0.64
HDAC6-229ENST00000486665 KCTD21Q4G0X4 260 aa11.07□□□□□ -0.64
HDAC6-229ENST00000486665 CDONQ4KMG0 1287 aa11.07□□□□□ -0.64
HDAC6-229ENST00000486665 C1QTNF12Q5T7M4 302 aa11.07□□□□□ -0.64
HDAC6-229ENST00000486665 OR2G6Q5TZ20 316 aa11.07□□□□□ -0.64
HDAC6-229ENST00000486665 RNLSQ5VYX0 342 aa11.07□□□□□ -0.64
HDAC6-229ENST00000486665 KCTD18Q6PI47 426 aaPredicted RBP11.07□□□□□ -0.64
HDAC6-229ENST00000486665 PLEKHG7Q6ZR37 379 aa11.07□□□□□ -0.64
HDAC6-229ENST00000486665 PRSS48Q7RTY5 328 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms