RNA–Protein interactions for RNA: ENST00000484867.1

RC3H1-205, Transcript of ring finger and CCCH-type domains 1, humanhuman

TSL 3

Gene RC3H1, Length 368 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-205ENST00000484867 XRCC2O43543 280 aa2.3□□□□□ -2.04
RC3H1-205ENST00000484867 SNAI2O43623 268 aa2.3□□□□□ -2.04
RC3H1-205ENST00000484867 ADAP1O75689 374 aa2.3□□□□□ -2.04
RC3H1-205ENST00000484867 AQP8O94778 261 aa2.3□□□□□ -2.04
RC3H1-205ENST00000484867 RPP14O95059 124 aaKnown RBP2.3□□□□□ -2.04
RC3H1-205ENST00000484867 VAPBO95292 243 aa2.3□□□□□ -2.04
RC3H1-205ENST00000484867 CST4P01036 141 aa2.3□□□□□ -2.04
RC3H1-205ENST00000484867 HBE1P02100 147 aa2.3□□□□□ -2.04
RC3H1-205ENST00000484867 KLK1P06870 262 aa2.3□□□□□ -2.04
RC3H1-205ENST00000484867 KRT16P08779 473 aa2.3□□□□□ -2.04
RC3H1-205ENST00000484867 HOXC4P09017 264 aaPredicted RBP2.3□□□□□ -2.04
RC3H1-205ENST00000484867 CD3GP09693 182 aa2.3□□□□□ -2.04
RC3H1-205ENST00000484867 OR1E1P30953 314 aa2.3□□□□□ -2.04
RC3H1-205ENST00000484867 UGT2B10P36537 528 aa2.3□□□□□ -2.04
RC3H1-205ENST00000484867 CEACAM3P40198 252 aa2.3□□□□□ -2.04
RC3H1-205ENST00000484867 GLP1RP43220 463 aa2.3□□□□□ -2.04
RC3H1-205ENST00000484867 CCR8P51685 355 aa2.3□□□□□ -2.04
RC3H1-205ENST00000484867 SUB1P53999 127 aaKnown RBP eCLIP2.3□□□□□ -2.04
RC3H1-205ENST00000484867 RAB14P61106 215 aa2.3□□□□□ -2.04
RC3H1-205ENST00000484867 RAP1BP61224 184 aa2.3□□□□□ -2.04
RC3H1-205ENST00000484867 STXBP1P61764 594 aaKnown RBP2.3□□□□□ -2.04
RC3H1-205ENST00000484867 SELENOTP62341 195 aa2.3□□□□□ -2.04
RC3H1-205ENST00000484867 SP4Q02446 784 aa2.3□□□□□ -2.04
RC3H1-205ENST00000484867 GLO1Q04760 184 aa2.3□□□□□ -2.04
RC3H1-205ENST00000484867 ACVR1Q04771 509 aa2.3□□□□□ -2.04
RC3H1-205ENST00000484867 ZNF763Q0D2J5 394 aa2.3□□□□□ -2.04
RC3H1-205ENST00000484867 EGFEM1PQ0D2K5 195 aa2.3□□□□□ -2.04
RC3H1-205ENST00000484867 STX5Q13190 355 aa2.3□□□□□ -2.04
RC3H1-205ENST00000484867 ATP6AP1Q15904 470 aa2.3□□□□□ -2.04
RC3H1-205ENST00000484867 PSMD5Q16401 504 aa2.3□□□□□ -2.04
RC3H1-205ENST00000484867 EXOC3L4Q17RC7 722 aa2.3□□□□□ -2.04
RC3H1-205ENST00000484867 TRMT5Q32P41 509 aaKnown RBP2.3□□□□□ -2.04
RC3H1-205ENST00000484867 ACTBL2Q562R1 376 aa2.3□□□□□ -2.04
RC3H1-205ENST00000484867 C5orf47Q569G3 176 aa2.3□□□□□ -2.04
RC3H1-205ENST00000484867 C1orf100Q5SVJ3 147 aa2.3□□□□□ -2.04
RC3H1-205ENST00000484867 CLEC18BQ6UXF7 455 aa2.3□□□□□ -2.04
RC3H1-205ENST00000484867 TFAP2EQ6VUC0 442 aa2.3□□□□□ -2.04
RC3H1-205ENST00000484867 PLEKHG7Q6ZR37 379 aa2.3□□□□□ -2.04
RC3H1-205ENST00000484867 LINC00336Q6ZUF6 198 aa2.3□□□□□ -2.04
RC3H1-205ENST00000484867 PID1Q7Z2X4 250 aa2.3□□□□□ -2.04
RC3H1-205ENST00000484867 PEX26Q7Z412 305 aa2.3□□□□□ -2.04
RC3H1-205ENST00000484867 TRAM1L1Q8N609 369 aa2.3□□□□□ -2.04
RC3H1-205ENST00000484867 VN1R2Q8NFZ6 395 aa2.3□□□□□ -2.04
RC3H1-205ENST00000484867 OR5M1Q8NGP8 315 aa2.3□□□□□ -2.04
RC3H1-205ENST00000484867 NUBPLQ8TB37 319 aa2.3□□□□□ -2.04
RC3H1-205ENST00000484867 TEX47Q8TBZ9 253 aa2.3□□□□□ -2.04
RC3H1-205ENST00000484867 TMEM54Q969K7 222 aa2.3□□□□□ -2.04
RC3H1-205ENST00000484867 ISOC2Q96AB3 205 aa2.3□□□□□ -2.04
RC3H1-205ENST00000484867 APH1AQ96BI3 265 aa2.3□□□□□ -2.04
RC3H1-205ENST00000484867 CCDC127Q96BQ5 260 aa2.3□□□□□ -2.04
RC3H1-205ENST00000484867 ECHDC3Q96DC8 303 aa2.3□□□□□ -2.04
RC3H1-205ENST00000484867 TMA16Q96EY4 203 aaKnown RBP2.3□□□□□ -2.04
RC3H1-205ENST00000484867 CTRCQ99895 268 aa2.3□□□□□ -2.04
RC3H1-205ENST00000484867 RARRES2Q99969 163 aa2.3□□□□□ -2.04
RC3H1-205ENST00000484867 MAP1LC3CQ9BXW4 147 aa2.3□□□□□ -2.04
RC3H1-205ENST00000484867 SRRQ9GZT4 340 aa2.3□□□□□ -2.04
RC3H1-205ENST00000484867 DRC3Q9H069 523 aa2.3□□□□□ -2.04
RC3H1-205ENST00000484867 SLC38A1Q9H2H9 487 aa2.3□□□□□ -2.04
RC3H1-205ENST00000484867 Q9H3A6 140 aa2.3□□□□□ -2.04
RC3H1-205ENST00000484867 C1orf198Q9H425 327 aa2.3□□□□□ -2.04
RC3H1-205ENST00000484867 NXF3Q9H4D5 531 aaKnown RBP2.3□□□□□ -2.04
RC3H1-205ENST00000484867 KIR3DX1Q9H7L2 352 aa2.3□□□□□ -2.04
RC3H1-205ENST00000484867 PATZ1Q9HBE1 687 aaKnown RBP2.3□□□□□ -2.04
RC3H1-205ENST00000484867 C8orf4Q9NR00 106 aa2.3□□□□□ -2.04
RC3H1-205ENST00000484867 CLN6Q9NWW5 311 aa2.3□□□□□ -2.04
RC3H1-205ENST00000484867 CALYQ9NYX4 217 aa2.3□□□□□ -2.04
RC3H1-205ENST00000484867 GNPTGQ9UJJ9 305 aa2.3□□□□□ -2.04
RC3H1-205ENST00000484867 UGT2A1Q9Y4X1 527 aa2.3□□□□□ -2.04
RC3H1-205ENST00000484867 UBN2Q6ZU65 1347 aa2.3□□□□□ -2.04
RC3H1-205ENST00000484867 PLB1Q6P1J6 1458 aa2.3□□□□□ -2.04
RC3H1-205ENST00000484867 COL22A1Q8NFW1 1626 aaPredicted RBP2.3□□□□□ -2.04
RC3H1-205ENST00000484867 CFAP65Q6ZU64 1925 aaKnown RBP2.29□□□□□ -2.04
RC3H1-205ENST00000484867 IGLV8-61A0A075B6I0 122 aa2.29□□□□□ -2.04
RC3H1-205ENST00000484867 A0A0A6YYH2 397 aa2.29□□□□□ -2.04
RC3H1-205ENST00000484867 A0A0B4J2A0 478 aa2.29□□□□□ -2.04
RC3H1-205ENST00000484867 A0A1W2PRF3 423 aa2.29□□□□□ -2.04
RC3H1-205ENST00000484867 A0A1W2PRM7 423 aa2.29□□□□□ -2.04
RC3H1-205ENST00000484867 TSPAN11A1L157 253 aa2.29□□□□□ -2.04
RC3H1-205ENST00000484867 RBMY1BA6NDE4 496 aaKnown RBP2.29□□□□□ -2.04
RC3H1-205ENST00000484867 RBMY1EA6NEQ0 496 aaKnown RBP2.29□□□□□ -2.04
RC3H1-205ENST00000484867 A6NJ64 397 aa2.29□□□□□ -2.04
RC3H1-205ENST00000484867 E7EWF7 191 aa2.29□□□□□ -2.04
RC3H1-205ENST00000484867 PGRMC1O00264 195 aaKnown RBP2.29□□□□□ -2.04
RC3H1-205ENST00000484867 RFXANKO14593 260 aa2.29□□□□□ -2.04
RC3H1-205ENST00000484867 AGPAT2O15120 278 aa2.29□□□□□ -2.04
RC3H1-205ENST00000484867 B4GALT5O43286 388 aa2.29□□□□□ -2.04
RC3H1-205ENST00000484867 EMC8O43402 210 aa2.29□□□□□ -2.04
RC3H1-205ENST00000484867 SLC19A2O60779 497 aa2.29□□□□□ -2.04
RC3H1-205ENST00000484867 PSIP1O75475 530 aaKnown RBP2.29□□□□□ -2.04
RC3H1-205ENST00000484867 VAMP5O95183 116 aa2.29□□□□□ -2.04
RC3H1-205ENST00000484867 SNAPINO95295 136 aa2.29□□□□□ -2.04
RC3H1-205ENST00000484867 IGHV3-48P01763 117 aa2.29□□□□□ -2.04
RC3H1-205ENST00000484867 RPN2P04844 631 aa2.29□□□□□ -2.04
RC3H1-205ENST00000484867 CTXN2P0C2S0 81 aa2.29□□□□□ -2.04
RC3H1-205ENST00000484867 RBMY1DP0C7P1 496 aaKnown RBP2.29□□□□□ -2.04
RC3H1-205ENST00000484867 RBMY1A1P0DJD3 496 aaKnown RBP2.29□□□□□ -2.04
RC3H1-205ENST00000484867 RD3LP0DJH9 198 aa2.29□□□□□ -2.04
RC3H1-205ENST00000484867 CFL1P23528 166 aaKnown RBP2.29□□□□□ -2.04
RC3H1-205ENST00000484867 MSNP26038 577 aaKnown RBP2.29□□□□□ -2.04
RC3H1-205ENST00000484867 AK4P27144 223 aaPredicted RBP2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms