RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 ZSCAN4Q8NAM6 433 aaPredicted RBP10.67□□□□□ -0.7
UBR4-213ENST00000483922 OR8B3Q8NGG8 313 aa10.67□□□□□ -0.7
UBR4-213ENST00000483922 OR10A6Q8NH74 314 aa10.67□□□□□ -0.7
UBR4-213ENST00000483922 UBE2FQ969M7 185 aa10.67□□□□□ -0.7
UBR4-213ENST00000483922 FAM71F1Q96KD3 344 aaPredicted RBP10.67□□□□□ -0.7
UBR4-213ENST00000483922 OR8B2Q96RD0 313 aa10.67□□□□□ -0.7
UBR4-213ENST00000483922 CGREF1Q99674 301 aa10.67□□□□□ -0.7
UBR4-213ENST00000483922 SLC30A2Q9BRI3 323 aa10.67□□□□□ -0.7
UBR4-213ENST00000483922 CCDC28BQ9BUN5 200 aa10.67□□□□□ -0.7
UBR4-213ENST00000483922 RASSF4Q9H2L5 321 aa10.67□□□□□ -0.7
UBR4-213ENST00000483922 TUBG2Q9NRH3 451 aa10.67□□□□□ -0.7
UBR4-213ENST00000483922 PTTG3PQ9NZH4 202 aa10.67□□□□□ -0.7
UBR4-213ENST00000483922 STX18Q9P2W9 335 aaKnown RBP10.67□□□□□ -0.7
UBR4-213ENST00000483922 CLN8Q9UBY8 286 aa10.67□□□□□ -0.7
UBR4-213ENST00000483922 POMT1Q9Y6A1 747 aa10.67□□□□□ -0.7
UBR4-213ENST00000483922 A0A0U1RQK1 487 aa10.66□□□□□ -0.7
UBR4-213ENST00000483922 ZNF879B4DU55 563 aa10.66□□□□□ -0.7
UBR4-213ENST00000483922 FBP2O00757 339 aa10.66□□□□□ -0.7
UBR4-213ENST00000483922 SGCEO43556 437 aa10.66□□□□□ -0.7
UBR4-213ENST00000483922 DOK2O60496 412 aa10.66□□□□□ -0.7
UBR4-213ENST00000483922 OR5F1O95221 314 aa10.66□□□□□ -0.7
UBR4-213ENST00000483922 IER3P46695 156 aa10.66□□□□□ -0.7
UBR4-213ENST00000483922 MPPED2Q15777 294 aa10.66□□□□□ -0.7
UBR4-213ENST00000483922 INTS11Q5TA45 600 aaKnown RBP10.66□□□□□ -0.7
UBR4-213ENST00000483922 FBXW12Q6X9E4 464 aa10.66□□□□□ -0.7
UBR4-213ENST00000483922 DHDDSQ86SQ9 333 aa10.66□□□□□ -0.7
UBR4-213ENST00000483922 PIP4P2Q8N4L2 257 aa10.66□□□□□ -0.7
UBR4-213ENST00000483922 PCYOX1LQ8NBM8 494 aa10.66□□□□□ -0.7
UBR4-213ENST00000483922 OR51A7Q8NH64 312 aa10.66□□□□□ -0.7
UBR4-213ENST00000483922 DYRK2Q92630 601 aa10.66□□□□□ -0.7
UBR4-213ENST00000483922 TLCD1Q96CP7 247 aa10.66□□□□□ -0.7
UBR4-213ENST00000483922 BPIFA2Q96DR5 249 aa10.66□□□□□ -0.7
UBR4-213ENST00000483922 PLEKHA8Q96JA3 519 aa10.66□□□□□ -0.7
UBR4-213ENST00000483922 SIRPDQ9H106 197 aa10.66□□□□□ -0.7
UBR4-213ENST00000483922 WDR76Q9H967 626 aa10.66□□□□□ -0.7
UBR4-213ENST00000483922 TCF7L1Q9HCS4 588 aa10.66□□□□□ -0.7
UBR4-213ENST00000483922 TMCC3Q9ULS5 477 aa10.66□□□□□ -0.7
UBR4-213ENST00000483922 A4GNTQ9UNA3 340 aa10.66□□□□□ -0.7
UBR4-213ENST00000483922 MED31Q9Y3C7 131 aa10.66□□□□□ -0.7
UBR4-213ENST00000483922 COL7A1Q02388 2944 aa10.65□□□□□ -0.7
UBR4-213ENST00000483922 DNAH9Q9NYC9 4486 aa10.65□□□□□ -0.7
UBR4-213ENST00000483922 TRAV27A0A087WT01 109 aa10.65□□□□□ -0.7
UBR4-213ENST00000483922 IFNL4K9M1U5 179 aa10.65□□□□□ -0.7
UBR4-213ENST00000483922 POLR3GO15318 223 aaPredicted RBP10.65□□□□□ -0.7
UBR4-213ENST00000483922 ALX3O95076 343 aa10.65□□□□□ -0.7
UBR4-213ENST00000483922 CTLA4P16410 223 aa10.65□□□□□ -0.7
UBR4-213ENST00000483922 RAD23AP54725 363 aa10.65□□□□□ -0.7
UBR4-213ENST00000483922 TAS2R41P59536 307 aa10.65□□□□□ -0.7
UBR4-213ENST00000483922 MAGOHP61326 146 aaKnown RBP10.65□□□□□ -0.7
UBR4-213ENST00000483922 DBPQ10586 325 aaPredicted RBP10.65□□□□□ -0.7
UBR4-213ENST00000483922 PDCD1Q15116 288 aa10.65□□□□□ -0.7
UBR4-213ENST00000483922 VMACQ2NL98 169 aa10.65□□□□□ -0.7
UBR4-213ENST00000483922 MESTQ5EB52 335 aa10.65□□□□□ -0.7
UBR4-213ENST00000483922 KPRPQ5T749 579 aaPredicted RBP10.65□□□□□ -0.7
UBR4-213ENST00000483922 DCDC5Q6ZRR9 648 aa10.65□□□□□ -0.7
UBR4-213ENST00000483922 CALHM3Q86XJ0 350 aa10.65□□□□□ -0.7
UBR4-213ENST00000483922 OR13G1Q8NGZ3 307 aa10.65□□□□□ -0.7
UBR4-213ENST00000483922 OR1F12Q8NHA8 337 aa10.65□□□□□ -0.7
UBR4-213ENST00000483922 SSMEM1Q8WWF3 244 aa10.65□□□□□ -0.7
UBR4-213ENST00000483922 Q96M85 177 aa10.65□□□□□ -0.7
UBR4-213ENST00000483922 C7orf26Q96N11 449 aa10.65□□□□□ -0.7
UBR4-213ENST00000483922 WDFY2Q96P53 400 aa10.65□□□□□ -0.7
UBR4-213ENST00000483922 C16orf95Q9H693 158 aa10.65□□□□□ -0.7
UBR4-213ENST00000483922 SMURF1Q9HCE7 757 aa10.65□□□□□ -0.7
UBR4-213ENST00000483922 ACOXLQ9NUZ1 547 aa10.65□□□□□ -0.7
UBR4-213ENST00000483922 ADAM18Q9Y3Q7 739 aa10.65□□□□□ -0.7
UBR4-213ENST00000483922 IGHV1-69DA0A0B4J2H0 117 aa10.64□□□□□ -0.71
UBR4-213ENST00000483922 GMNCA6NCL1 334 aa10.64□□□□□ -0.71
UBR4-213ENST00000483922 P2RY10O00398 339 aa10.64□□□□□ -0.71
UBR4-213ENST00000483922 PHYHO14832 338 aa10.64□□□□□ -0.71
UBR4-213ENST00000483922 RER1O15258 196 aa10.64□□□□□ -0.71
UBR4-213ENST00000483922 TOX4O94842 621 aa10.64□□□□□ -0.71
UBR4-213ENST00000483922 IGHV1-69P01742 117 aa10.64□□□□□ -0.71
UBR4-213ENST00000483922 IFI30P13284 250 aa10.64□□□□□ -0.71
UBR4-213ENST00000483922 ANOS1P23352 680 aa10.64□□□□□ -0.71
UBR4-213ENST00000483922 GATA4P43694 442 aa10.64□□□□□ -0.71
UBR4-213ENST00000483922 SRP9P49458 86 aaKnown RBP10.64□□□□□ -0.71
UBR4-213ENST00000483922 RPL15P61313 204 aaKnown RBP10.64□□□□□ -0.71
UBR4-213ENST00000483922 HIST1H3AP68431 136 aa10.64□□□□□ -0.71
UBR4-213ENST00000483922 SCRN3Q0VDG4 424 aa10.64□□□□□ -0.71
UBR4-213ENST00000483922 COX10Q12887 443 aa10.64□□□□□ -0.71
UBR4-213ENST00000483922 HIST2H3PS2Q5TEC6 136 aa10.64□□□□□ -0.71
UBR4-213ENST00000483922 SAMD5Q5TGI4 173 aa10.64□□□□□ -0.71
UBR4-213ENST00000483922 PRAMEF6Q5VXH4 476 aa10.64□□□□□ -0.71
UBR4-213ENST00000483922 HIST2H3AQ71DI3 136 aa10.64□□□□□ -0.71
UBR4-213ENST00000483922 FAM122BQ7Z309 247 aa10.64□□□□□ -0.71
UBR4-213ENST00000483922 NAA40Q86UY6 237 aa10.64□□□□□ -0.71
UBR4-213ENST00000483922 LDLRAD3Q86YD5 345 aa10.64□□□□□ -0.71
UBR4-213ENST00000483922 PDZD9Q8IXQ8 264 aa10.64□□□□□ -0.71
UBR4-213ENST00000483922 FGFRL1Q8N441 504 aa10.64□□□□□ -0.71
UBR4-213ENST00000483922 BHLHE23Q8NDY6 225 aa10.64□□□□□ -0.71
UBR4-213ENST00000483922 FNDC8Q8TC99 324 aa10.64□□□□□ -0.71
UBR4-213ENST00000483922 SLC26A7Q8TE54 656 aa10.64□□□□□ -0.71
UBR4-213ENST00000483922 LHX4Q969G2 390 aa10.64□□□□□ -0.71
UBR4-213ENST00000483922 WACQ9BTA9 647 aa10.64□□□□□ -0.71
UBR4-213ENST00000483922 SEMA6AQ9H2E6 1030 aa10.64□□□□□ -0.71
UBR4-213ENST00000483922 NDUFAF1Q9Y375 327 aa10.64□□□□□ -0.71
UBR4-213ENST00000483922 SNX13Q9Y5W8 968 aa10.64□□□□□ -0.71
UBR4-213ENST00000483922 IQCF6A8MYZ5 107 aa10.63□□□□□ -0.71
UBR4-213ENST00000483922 CDC42EP2O14613 210 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms