RNA–Protein interactions for RNA: ENST00000483021.5

R3HDM1-215, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-215ENST00000483021 NUAK2Q9H093 628 aa16.41■□□□□ 0.22
R3HDM1-215ENST00000483021 SPAG4Q9NPE6 437 aa16.41■□□□□ 0.22
R3HDM1-215ENST00000483021 DDX28Q9NUL7 540 aaKnown RBP16.41■□□□□ 0.22
R3HDM1-215ENST00000483021 IER3IP1Q9Y5U9 82 aa16.41■□□□□ 0.22
R3HDM1-215ENST00000483021 UNC119BA6NIH7 251 aa16.4■□□□□ 0.22
R3HDM1-215ENST00000483021 F5H0A9 414 aaPredicted RBP16.4■□□□□ 0.22
R3HDM1-215ENST00000483021 RER1O15258 196 aa16.4■□□□□ 0.22
R3HDM1-215ENST00000483021 GMNNO75496 209 aa16.4■□□□□ 0.22
R3HDM1-215ENST00000483021 SLC6A9P48067 706 aa16.4■□□□□ 0.22
R3HDM1-215ENST00000483021 MMP16P51512 607 aa16.4■□□□□ 0.22
R3HDM1-215ENST00000483021 PSME3P61289 254 aa16.4■□□□□ 0.22
R3HDM1-215ENST00000483021 ZNF154Q13106 437 aa16.4■□□□□ 0.22
R3HDM1-215ENST00000483021 KRT72Q14CN4 511 aa16.4■□□□□ 0.22
R3HDM1-215ENST00000483021 ESCO2Q56NI9 601 aa16.4■□□□□ 0.22
R3HDM1-215ENST00000483021 GLYATQ6IB77 296 aa16.4■□□□□ 0.22
R3HDM1-215ENST00000483021 SMARCD3Q6STE5 483 aa16.4■□□□□ 0.22
R3HDM1-215ENST00000483021 PTCHD4Q6ZW05 846 aa16.4■□□□□ 0.22
R3HDM1-215ENST00000483021 ZDHHC22Q8N966 263 aa16.4■□□□□ 0.22
R3HDM1-215ENST00000483021 DVL3Q92997 716 aaPredicted RBP16.4■□□□□ 0.22
R3HDM1-215ENST00000483021 DHRS1Q96LJ7 313 aa16.4■□□□□ 0.22
R3HDM1-215ENST00000483021 MRI1Q9BV20 369 aa16.4■□□□□ 0.22
R3HDM1-215ENST00000483021 ESM1Q9NQ30 184 aa16.4■□□□□ 0.22
R3HDM1-215ENST00000483021 MMP26Q9NRE1 261 aa16.4■□□□□ 0.22
R3HDM1-215ENST00000483021 DCAF13Q9NV06 445 aaKnown RBP16.4■□□□□ 0.22
R3HDM1-215ENST00000483021 ZNF446Q9NWS9 450 aa16.4■□□□□ 0.22
R3HDM1-215ENST00000483021 PTTG3PQ9NZH4 202 aa16.4■□□□□ 0.22
R3HDM1-215ENST00000483021 OR5V1Q9UGF6 321 aa16.4■□□□□ 0.22
R3HDM1-215ENST00000483021 IL20RAQ9UHF4 553 aa16.4■□□□□ 0.22
R3HDM1-215ENST00000483021 NUP50Q9UKX7 468 aa16.4■□□□□ 0.22
R3HDM1-215ENST00000483021 LRCH1Q9Y2L9 728 aa16.4■□□□□ 0.22
R3HDM1-215ENST00000483021 INSIG2Q9Y5U4 225 aa16.4■□□□□ 0.22
R3HDM1-215ENST00000483021 AUP1Q9Y679 476 aa16.4■□□□□ 0.22
R3HDM1-215ENST00000483021 DOCK11Q5JSL3 2073 aa16.4■□□□□ 0.22
R3HDM1-215ENST00000483021 MGAM2Q2M2H8 2515 aa16.39■□□□□ 0.21
R3HDM1-215ENST00000483021 TRBV4-1A0A0J9YWV2 114 aa16.39■□□□□ 0.21
R3HDM1-215ENST00000483021 TMEM178BH3BS89 294 aa16.39■□□□□ 0.21
R3HDM1-215ENST00000483021 DBHP09172 617 aa16.39■□□□□ 0.21
R3HDM1-215ENST00000483021 ZNF12P17014 697 aa16.39■□□□□ 0.21
R3HDM1-215ENST00000483021 MDH1P40925 334 aaKnown RBP16.39■□□□□ 0.21
R3HDM1-215ENST00000483021 ERFP50548 548 aa16.39■□□□□ 0.21
R3HDM1-215ENST00000483021 FXYD6P3P58550 94 aa16.39■□□□□ 0.21
R3HDM1-215ENST00000483021 UBA52P62987 128 aaKnown RBP16.39■□□□□ 0.21
R3HDM1-215ENST00000483021 OTPQ5XKR4 325 aa16.39■□□□□ 0.21
R3HDM1-215ENST00000483021 OR5AS1Q8N127 324 aa16.39■□□□□ 0.21
R3HDM1-215ENST00000483021 ATG16L2Q8NAA4 619 aa16.39■□□□□ 0.21
R3HDM1-215ENST00000483021 OR8G5Q8NG78 346 aa16.39■□□□□ 0.21
R3HDM1-215ENST00000483021 OR13G1Q8NGZ3 307 aa16.39■□□□□ 0.21
R3HDM1-215ENST00000483021 SGMS2Q8NHU3 365 aa16.39■□□□□ 0.21
R3HDM1-215ENST00000483021 FANK1Q8TC84 345 aa16.39■□□□□ 0.21
R3HDM1-215ENST00000483021 C22orf15Q8WYQ4 148 aa16.39■□□□□ 0.21
R3HDM1-215ENST00000483021 C7orf34Q96L11 122 aa16.39■□□□□ 0.21
R3HDM1-215ENST00000483021 ZNF582Q96NG8 517 aaPredicted RBP16.39■□□□□ 0.21
R3HDM1-215ENST00000483021 GPA33Q99795 319 aa16.39■□□□□ 0.21
R3HDM1-215ENST00000483021 ZMAT3Q9HA38 289 aaKnown RBP16.39■□□□□ 0.21
R3HDM1-215ENST00000483021 GCM1Q9NP62 436 aa16.39■□□□□ 0.21
R3HDM1-215ENST00000483021 MED4Q9NPJ6 270 aa16.39■□□□□ 0.21
R3HDM1-215ENST00000483021 IMPA2O14732 288 aa16.38■□□□□ 0.21
R3HDM1-215ENST00000483021 CDKN2AP42771 156 aaKnown RBP16.38■□□□□ 0.21
R3HDM1-215ENST00000483021 CENPAP49450 140 aa16.38■□□□□ 0.21
R3HDM1-215ENST00000483021 SRP9P49458 86 aaKnown RBP16.38■□□□□ 0.21
R3HDM1-215ENST00000483021 SMIM11AP58511 58 aa16.38■□□□□ 0.21
R3HDM1-215ENST00000483021 SEC61A1P61619 476 aaKnown RBP16.38■□□□□ 0.21
R3HDM1-215ENST00000483021 HIST1H3AP68431 136 aa16.38■□□□□ 0.21
R3HDM1-215ENST00000483021 HNRNPA0Q13151 305 aaKnown RBP16.38■□□□□ 0.21
R3HDM1-215ENST00000483021 HLXQ14774 488 aaPredicted RBP16.38■□□□□ 0.21
R3HDM1-215ENST00000483021 SEC23BQ15437 767 aa16.38■□□□□ 0.21
R3HDM1-215ENST00000483021 HIST2H3PS2Q5TEC6 136 aa16.38■□□□□ 0.21
R3HDM1-215ENST00000483021 HIST2H3AQ71DI3 136 aa16.38■□□□□ 0.21
R3HDM1-215ENST00000483021 OR10AD1Q8NGE0 317 aa16.38■□□□□ 0.21
R3HDM1-215ENST00000483021 MEGF10Q96KG7 1140 aa16.38■□□□□ 0.21
R3HDM1-215ENST00000483021 ERMAPQ96PL5 475 aaPredicted RBP16.38■□□□□ 0.21
R3HDM1-215ENST00000483021 LHFPL6Q9Y693 200 aa16.38■□□□□ 0.21
R3HDM1-215ENST00000483021 CEACAM18A8MTB9 384 aa16.37■□□□□ 0.21
R3HDM1-215ENST00000483021 TRAPPC2LH3BP13 241 aa16.37■□□□□ 0.21
R3HDM1-215ENST00000483021 PPP1R3DO95685 299 aa16.37■□□□□ 0.21
R3HDM1-215ENST00000483021 RENP00797 406 aa16.37■□□□□ 0.21
R3HDM1-215ENST00000483021 SELEP16581 610 aa16.37■□□□□ 0.21
R3HDM1-215ENST00000483021 PRDX6P30041 224 aa16.37■□□□□ 0.21
R3HDM1-215ENST00000483021 SLC6A6P31641 620 aa16.37■□□□□ 0.21
R3HDM1-215ENST00000483021 COX10Q12887 443 aa16.37■□□□□ 0.21
R3HDM1-215ENST00000483021 TUSC1Q2TAM9 212 aa16.37■□□□□ 0.21
R3HDM1-215ENST00000483021 AWAT1Q58HT5 328 aa16.37■□□□□ 0.21
R3HDM1-215ENST00000483021 OR2T2Q6IF00 324 aa16.37■□□□□ 0.21
R3HDM1-215ENST00000483021 DOK3Q7L591 496 aa16.37■□□□□ 0.21
R3HDM1-215ENST00000483021 JAZF1Q86VZ6 243 aa16.37■□□□□ 0.21
R3HDM1-215ENST00000483021 OR52J3Q8NH60 311 aa16.37■□□□□ 0.21
R3HDM1-215ENST00000483021 FUZQ9BT04 418 aa16.37■□□□□ 0.21
R3HDM1-215ENST00000483021 PPIAL4AQ9Y536 164 aa16.37■□□□□ 0.21
R3HDM1-215ENST00000483021 PKD1L1Q8TDX9 2849 aa16.36■□□□□ 0.21
R3HDM1-215ENST00000483021 IGLV1-36A0A0B4J1U3 117 aa16.36■□□□□ 0.21
R3HDM1-215ENST00000483021 LRRC30A6NM36 301 aa16.36■□□□□ 0.21
R3HDM1-215ENST00000483021 IQCF6A8MYZ5 107 aa16.36■□□□□ 0.21
R3HDM1-215ENST00000483021 ARPC3O15145 178 aa16.36■□□□□ 0.21
R3HDM1-215ENST00000483021 SPRY1O43609 319 aaPredicted RBP16.36■□□□□ 0.21
R3HDM1-215ENST00000483021 DIRAS1O95057 198 aa16.36■□□□□ 0.21
R3HDM1-215ENST00000483021 RPS2P15880 293 aaKnown RBP16.36■□□□□ 0.21
R3HDM1-215ENST00000483021 MEP1BQ16820 701 aa16.36■□□□□ 0.21
R3HDM1-215ENST00000483021 ZNF181Q2M3W8 571 aa16.36■□□□□ 0.21
R3HDM1-215ENST00000483021 RFX4Q33E94 735 aa16.36■□□□□ 0.21
R3HDM1-215ENST00000483021 LEG1Q6P5S2 330 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms