RNA–Protein interactions for RNA: ENST00000481260.1

RAPGEF1-207, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 1,034 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-207ENST00000481260 MMP15P51511 669 aa9.72□□□□□ -0.85
RAPGEF1-207ENST00000481260 KLF3P57682 345 aaPredicted RBP9.72□□□□□ -0.85
RAPGEF1-207ENST00000481260 DSCR9P59020 149 aa9.72□□□□□ -0.85
RAPGEF1-207ENST00000481260 RPS23P62266 143 aaKnown RBP9.72□□□□□ -0.85
RAPGEF1-207ENST00000481260 HIST1H3AP68431 136 aa9.72□□□□□ -0.85
RAPGEF1-207ENST00000481260 CCL8P80075 99 aa9.72□□□□□ -0.85
RAPGEF1-207ENST00000481260 TEKQ02763 1124 aa9.72□□□□□ -0.85
RAPGEF1-207ENST00000481260 PSG7Q13046 419 aa9.72□□□□□ -0.85
RAPGEF1-207ENST00000481260 LSAMPQ13449 338 aa9.72□□□□□ -0.85
RAPGEF1-207ENST00000481260 CRMP1Q14194 572 aa9.72□□□□□ -0.85
RAPGEF1-207ENST00000481260 FLOT2Q14254 428 aa9.72□□□□□ -0.85
RAPGEF1-207ENST00000481260 SLC36A3Q495N2 470 aa9.72□□□□□ -0.85
RAPGEF1-207ENST00000481260 HIST2H3PS2Q5TEC6 136 aa9.72□□□□□ -0.85
RAPGEF1-207ENST00000481260 SLC18B1Q6NT16 456 aa9.72□□□□□ -0.85
RAPGEF1-207ENST00000481260 ACSM5Q6NUN0 579 aa9.72□□□□□ -0.85
RAPGEF1-207ENST00000481260 HIST2H3AQ71DI3 136 aa9.72□□□□□ -0.85
RAPGEF1-207ENST00000481260 ZBTB46Q86UZ6 589 aa9.72□□□□□ -0.85
RAPGEF1-207ENST00000481260 AQP12AQ8IXF9 295 aa9.72□□□□□ -0.85
RAPGEF1-207ENST00000481260 ZNF786Q8N393 782 aa9.72□□□□□ -0.85
RAPGEF1-207ENST00000481260 OR10S1Q8NGN2 331 aa9.72□□□□□ -0.85
RAPGEF1-207ENST00000481260 OR1F12Q8NHA8 337 aa9.72□□□□□ -0.85
RAPGEF1-207ENST00000481260 FAM81AQ8TBF8 368 aa9.72□□□□□ -0.85
RAPGEF1-207ENST00000481260 MAP6Q96JE9 813 aa9.72□□□□□ -0.85
RAPGEF1-207ENST00000481260 SNX18Q96RF0 628 aa9.72□□□□□ -0.85
RAPGEF1-207ENST00000481260 PIMREGQ9BSJ6 248 aa9.72□□□□□ -0.85
RAPGEF1-207ENST00000481260 DGCR6LQ9BY27 220 aa9.72□□□□□ -0.85
RAPGEF1-207ENST00000481260 BCL2L14Q9BZR8 327 aa9.72□□□□□ -0.85
RAPGEF1-207ENST00000481260 NDEL1Q9GZM8 345 aa9.72□□□□□ -0.85
RAPGEF1-207ENST00000481260 C1orf198Q9H425 327 aa9.72□□□□□ -0.85
RAPGEF1-207ENST00000481260 WDR76Q9H967 626 aa9.72□□□□□ -0.85
RAPGEF1-207ENST00000481260 MSL2Q9HCI7 577 aa9.72□□□□□ -0.85
RAPGEF1-207ENST00000481260 PNRC2Q9NPJ4 139 aaKnown RBP9.72□□□□□ -0.85
RAPGEF1-207ENST00000481260 HINT3Q9NQE9 182 aaKnown RBP9.72□□□□□ -0.85
RAPGEF1-207ENST00000481260 PLEK2Q9NYT0 353 aa9.72□□□□□ -0.85
RAPGEF1-207ENST00000481260 GRIP1Q9Y3R0 1128 aa9.72□□□□□ -0.85
RAPGEF1-207ENST00000481260 ATRQ13535 2644 aa9.71□□□□□ -0.85
RAPGEF1-207ENST00000481260 FAM183AA6NL82 134 aa9.71□□□□□ -0.86
RAPGEF1-207ENST00000481260 C17orf100A8MU93 164 aa9.71□□□□□ -0.86
RAPGEF1-207ENST00000481260 KIAA1324LA8MWY0 1029 aaPredicted RBP9.71□□□□□ -0.86
RAPGEF1-207ENST00000481260 CASQ2O14958 399 aaPredicted RBP9.71□□□□□ -0.86
RAPGEF1-207ENST00000481260 TIPRLO75663 272 aa9.71□□□□□ -0.86
RAPGEF1-207ENST00000481260 ABHD16AO95870 558 aa9.71□□□□□ -0.86
RAPGEF1-207ENST00000481260 RENP00797 406 aa9.71□□□□□ -0.86
RAPGEF1-207ENST00000481260 PTHP01270 115 aa9.71□□□□□ -0.86
RAPGEF1-207ENST00000481260 IGHV1-46P01743 117 aa9.71□□□□□ -0.86
RAPGEF1-207ENST00000481260 IGHV3-13P01766 116 aa9.71□□□□□ -0.86
RAPGEF1-207ENST00000481260 GSTT1P30711 240 aa9.71□□□□□ -0.86
RAPGEF1-207ENST00000481260 GUCA1AP43080 201 aaPredicted RBP9.71□□□□□ -0.86
RAPGEF1-207ENST00000481260 PCBD1P61457 104 aa9.71□□□□□ -0.86
RAPGEF1-207ENST00000481260 LSM6P62312 80 aaKnown RBP9.71□□□□□ -0.86
RAPGEF1-207ENST00000481260 SCRN3Q0VDG4 424 aa9.71□□□□□ -0.86
RAPGEF1-207ENST00000481260 AQP6Q13520 282 aa9.71□□□□□ -0.86
RAPGEF1-207ENST00000481260 CCNIQ14094 377 aa9.71□□□□□ -0.86
RAPGEF1-207ENST00000481260 CNPY1Q3B7I2 92 aa9.71□□□□□ -0.86
RAPGEF1-207ENST00000481260 KRTAP27-1Q3LI81 207 aa9.71□□□□□ -0.86
RAPGEF1-207ENST00000481260 C6orf52Q5T4I8 152 aa9.71□□□□□ -0.86
RAPGEF1-207ENST00000481260 Q6ZR03 302 aa9.71□□□□□ -0.86
RAPGEF1-207ENST00000481260 IL17RELQ6ZVW7 336 aa9.71□□□□□ -0.86
RAPGEF1-207ENST00000481260 SYT9Q86SS6 491 aa9.71□□□□□ -0.86
RAPGEF1-207ENST00000481260 LNX2Q8N448 690 aa9.71□□□□□ -0.86
RAPGEF1-207ENST00000481260 ZNF511Q8NB15 262 aa9.71□□□□□ -0.86
RAPGEF1-207ENST00000481260 GIPC3Q8TF64 312 aa9.71□□□□□ -0.86
RAPGEF1-207ENST00000481260 NEU4Q8WWR8 484 aaPredicted RBP9.71□□□□□ -0.86
RAPGEF1-207ENST00000481260 PPP1R14BQ96C90 147 aa9.71□□□□□ -0.86
RAPGEF1-207ENST00000481260 MSI2Q96DH6 328 aaKnown RBP9.71□□□□□ -0.86
RAPGEF1-207ENST00000481260 RBM4Q9BWF3 364 aaKnown RBP9.71□□□□□ -0.86
RAPGEF1-207ENST00000481260 RACGAP1Q9H0H5 632 aa9.71□□□□□ -0.86
RAPGEF1-207ENST00000481260 ZNF275Q9NSD4 429 aaPredicted RBP9.71□□□□□ -0.86
RAPGEF1-207ENST00000481260 PDP1Q9P0J1 537 aaPredicted RBP9.71□□□□□ -0.86
RAPGEF1-207ENST00000481260 POLR1DQ9Y2S0 133 aa9.71□□□□□ -0.86
RAPGEF1-207ENST00000481260 MALRD1Q5VYJ5 2156 aa9.7□□□□□ -0.86
RAPGEF1-207ENST00000481260 VSTM5A8MXK1 200 aa9.7□□□□□ -0.86
RAPGEF1-207ENST00000481260 ICMTO60725 284 aa9.7□□□□□ -0.86
RAPGEF1-207ENST00000481260 CSF3P09919 207 aa9.7□□□□□ -0.86
RAPGEF1-207ENST00000481260 GIFP27352 417 aa9.7□□□□□ -0.86
RAPGEF1-207ENST00000481260 CRABP1P29762 137 aa9.7□□□□□ -0.86
RAPGEF1-207ENST00000481260 COX10Q12887 443 aa9.7□□□□□ -0.86
RAPGEF1-207ENST00000481260 AVPI1Q5T686 147 aa9.7□□□□□ -0.86
RAPGEF1-207ENST00000481260 MBNL2Q5VZF2 373 aaKnown RBP9.7□□□□□ -0.86
RAPGEF1-207ENST00000481260 TMEM236Q5W0B7 351 aa9.7□□□□□ -0.86
RAPGEF1-207ENST00000481260 IZUMO2Q6UXV1 221 aa9.7□□□□□ -0.86
RAPGEF1-207ENST00000481260 PAPD5Q8NDF8 572 aaKnown RBP9.7□□□□□ -0.86
RAPGEF1-207ENST00000481260 PROKR2Q8NFJ6 384 aa9.7□□□□□ -0.86
RAPGEF1-207ENST00000481260 OR52L1Q8NGH7 329 aa9.7□□□□□ -0.86
RAPGEF1-207ENST00000481260 CMBLQ96DG6 245 aa9.7□□□□□ -0.86
RAPGEF1-207ENST00000481260 NMNAT2Q9BZQ4 307 aa9.7□□□□□ -0.86
RAPGEF1-207ENST00000481260 S100A14Q9HCY8 104 aa9.7□□□□□ -0.86
RAPGEF1-207ENST00000481260 PTTG3PQ9NZH4 202 aa9.7□□□□□ -0.86
RAPGEF1-207ENST00000481260 PTTG2Q9NZH5 202 aa9.7□□□□□ -0.86
RAPGEF1-207ENST00000481260 EIF3KQ9UBQ5 218 aaKnown RBP9.7□□□□□ -0.86
RAPGEF1-207ENST00000481260 CYB5R1Q9UHQ9 305 aa9.7□□□□□ -0.86
RAPGEF1-207ENST00000481260 IGHV3-64DA0A0J9YX35 117 aa9.69□□□□□ -0.86
RAPGEF1-207ENST00000481260 M0R129 80 aa9.69□□□□□ -0.86
RAPGEF1-207ENST00000481260 IDH3BO43837 385 aa9.69□□□□□ -0.86
RAPGEF1-207ENST00000481260 MITFO75030 526 aaPredicted RBP9.69□□□□□ -0.86
RAPGEF1-207ENST00000481260 HLA-DQA2P01906 255 aa9.69□□□□□ -0.86
RAPGEF1-207ENST00000481260 COX5BP10606 129 aa9.69□□□□□ -0.86
RAPGEF1-207ENST00000481260 ZNF23P17027 643 aa9.69□□□□□ -0.86
RAPGEF1-207ENST00000481260 SPI1P17947 270 aa9.69□□□□□ -0.86
RAPGEF1-207ENST00000481260 POU1F1P28069 291 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms