RNA–Protein interactions for RNA: ENST00000480187.5

NUP58-211, Transcript of nucleoporin 58, humanhuman

TSL 2

Gene NUP58, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-211ENST00000480187 SF3A3Q12874 501 aaKnown RBP eCLIP13.15□□□□□ -0.3
NUP58-211ENST00000480187 BAMBIQ13145 260 aa13.15□□□□□ -0.3
NUP58-211ENST00000480187 KCNMB1Q16558 191 aa13.15□□□□□ -0.3
NUP58-211ENST00000480187 TSEN54Q7Z6J9 526 aaKnown RBP13.15□□□□□ -0.3
NUP58-211ENST00000480187 ADCK1Q86TW2 530 aa13.15□□□□□ -0.3
NUP58-211ENST00000480187 BCL6BQ8N143 479 aaPredicted RBP13.15□□□□□ -0.3
NUP58-211ENST00000480187 ATG16L2Q8NAA4 619 aa13.15□□□□□ -0.3
NUP58-211ENST00000480187 OR8G5Q8NG78 346 aa13.15□□□□□ -0.3
NUP58-211ENST00000480187 OR5L1Q8NGL2 311 aa13.15□□□□□ -0.3
NUP58-211ENST00000480187 OR13G1Q8NGZ3 307 aa13.15□□□□□ -0.3
NUP58-211ENST00000480187 FAM46AQ96IP4 442 aaKnown RBP13.15□□□□□ -0.3
NUP58-211ENST00000480187 C1orf147Q96MC9 270 aaPredicted RBP13.15□□□□□ -0.3
NUP58-211ENST00000480187 ZNF48Q96MX3 618 aaPredicted RBP13.15□□□□□ -0.3
NUP58-211ENST00000480187 HOPXQ9BPY8 73 aaPredicted RBP13.15□□□□□ -0.3
NUP58-211ENST00000480187 ENPP4Q9Y6X5 453 aa13.15□□□□□ -0.3
NUP58-211ENST00000480187 A0A1W2PRQ8 180 aa13.14□□□□□ -0.31
NUP58-211ENST00000480187 CLDN34H7C241 214 aa13.14□□□□□ -0.31
NUP58-211ENST00000480187 NME4O00746 187 aa13.14□□□□□ -0.31
NUP58-211ENST00000480187 RER1O15258 196 aa13.14□□□□□ -0.31
NUP58-211ENST00000480187 SASH3O75995 380 aa13.14□□□□□ -0.31
NUP58-211ENST00000480187 FSTL3O95633 263 aa13.14□□□□□ -0.31
NUP58-211ENST00000480187 RNASE1P07998 156 aaKnown RBP13.14□□□□□ -0.31
NUP58-211ENST00000480187 DBHP09172 617 aa13.14□□□□□ -0.31
NUP58-211ENST00000480187 SRP9P49458 86 aaKnown RBP13.14□□□□□ -0.31
NUP58-211ENST00000480187 HIST1H3AP68431 136 aa13.14□□□□□ -0.31
NUP58-211ENST00000480187 PAX2Q02962 417 aa13.14□□□□□ -0.31
NUP58-211ENST00000480187 DGCR6Q14129 220 aa13.14□□□□□ -0.31
NUP58-211ENST00000480187 HLXQ14774 488 aaPredicted RBP13.14□□□□□ -0.31
NUP58-211ENST00000480187 ZNF181Q2M3W8 571 aa13.14□□□□□ -0.31
NUP58-211ENST00000480187 HIST2H3PS2Q5TEC6 136 aa13.14□□□□□ -0.31
NUP58-211ENST00000480187 OTPQ5XKR4 325 aa13.14□□□□□ -0.31
NUP58-211ENST00000480187 PGM2L1Q6PCE3 622 aa13.14□□□□□ -0.31
NUP58-211ENST00000480187 LRRN1Q6UXK5 716 aa13.14□□□□□ -0.31
NUP58-211ENST00000480187 C9orf139Q6ZV77 190 aa13.14□□□□□ -0.31
NUP58-211ENST00000480187 HIST2H3AQ71DI3 136 aa13.14□□□□□ -0.31
NUP58-211ENST00000480187 OR5AS1Q8N127 324 aa13.14□□□□□ -0.31
NUP58-211ENST00000480187 POU5F2Q8N7G0 328 aa13.14□□□□□ -0.31
NUP58-211ENST00000480187 OR52E2Q8NGJ4 325 aa13.14□□□□□ -0.31
NUP58-211ENST00000480187 APOBEC3DQ96AK3 386 aaPredicted RBP13.14□□□□□ -0.31
NUP58-211ENST00000480187 MEGF10Q96KG7 1140 aa13.14□□□□□ -0.31
NUP58-211ENST00000480187 ZNF582Q96NG8 517 aaPredicted RBP13.14□□□□□ -0.31
NUP58-211ENST00000480187 DUX5Q96PT3 197 aa13.14□□□□□ -0.31
NUP58-211ENST00000480187 COQ7Q99807 217 aa13.14□□□□□ -0.31
NUP58-211ENST00000480187 SSBP3Q9BWW4 388 aaPredicted RBP13.14□□□□□ -0.31
NUP58-211ENST00000480187 MS4A7Q9GZW8 240 aaPredicted RBP13.14□□□□□ -0.31
NUP58-211ENST00000480187 NUAK2Q9H093 628 aa13.14□□□□□ -0.31
NUP58-211ENST00000480187 HDHD2Q9H0R4 259 aa13.14□□□□□ -0.31
NUP58-211ENST00000480187 RERGLQ9H628 205 aa13.14□□□□□ -0.31
NUP58-211ENST00000480187 TMEM165Q9HC07 324 aa13.14□□□□□ -0.31
NUP58-211ENST00000480187 PTTG3PQ9NZH4 202 aa13.14□□□□□ -0.31
NUP58-211ENST00000480187 ARMCX1Q9P291 453 aa13.14□□□□□ -0.31
NUP58-211ENST00000480187 TXNDC12O95881 172 aa13.13□□□□□ -0.31
NUP58-211ENST00000480187 H1F0P07305 194 aaKnown RBP13.13□□□□□ -0.31
NUP58-211ENST00000480187 RPS2P15880 293 aaKnown RBP13.13□□□□□ -0.31
NUP58-211ENST00000480187 CRABP1P29762 137 aa13.13□□□□□ -0.31
NUP58-211ENST00000480187 CD80P33681 288 aa13.13□□□□□ -0.31
NUP58-211ENST00000480187 OMPP47874 163 aa13.13□□□□□ -0.31
NUP58-211ENST00000480187 SLC7A2P52569 658 aa13.13□□□□□ -0.31
NUP58-211ENST00000480187 OR2T2Q6IF00 324 aa13.13□□□□□ -0.31
NUP58-211ENST00000480187 C8orf82Q6P1X6 216 aaPredicted RBP13.13□□□□□ -0.31
NUP58-211ENST00000480187 BTNL3Q6UXE8 466 aa13.13□□□□□ -0.31
NUP58-211ENST00000480187 DPY19L2P2Q6ZN68 376 aa13.13□□□□□ -0.31
NUP58-211ENST00000480187 PTCHD4Q6ZW05 846 aa13.13□□□□□ -0.31
NUP58-211ENST00000480187 PARP8Q8N3A8 854 aa13.13□□□□□ -0.31
NUP58-211ENST00000480187 GJC3Q8NFK1 279 aa13.13□□□□□ -0.31
NUP58-211ENST00000480187 OR10AD1Q8NGE0 317 aa13.13□□□□□ -0.31
NUP58-211ENST00000480187 ZNF420Q8TAQ5 688 aaPredicted RBP13.13□□□□□ -0.31
NUP58-211ENST00000480187 SLC25A28Q96A46 364 aa13.13□□□□□ -0.31
NUP58-211ENST00000480187 DACT3Q96B18 629 aaPredicted RBP13.13□□□□□ -0.31
NUP58-211ENST00000480187 SLC30A2Q9BRI3 323 aa13.13□□□□□ -0.31
NUP58-211ENST00000480187 C1QTNF5Q9BXJ0 243 aa13.13□□□□□ -0.31
NUP58-211ENST00000480187 MIOXQ9UGB7 285 aa13.13□□□□□ -0.31
NUP58-211ENST00000480187 IGHV2-70DA0A0C4DH43 119 aa13.12□□□□□ -0.31
NUP58-211ENST00000480187 A0A1B0GWJ7 208 aa13.12□□□□□ -0.31
NUP58-211ENST00000480187 IQCF6A8MYZ5 107 aa13.12□□□□□ -0.31
NUP58-211ENST00000480187 SOCS2O14508 198 aa13.12□□□□□ -0.31
NUP58-211ENST00000480187 NDUFAB1O14561 156 aa13.12□□□□□ -0.31
NUP58-211ENST00000480187 IMPA2O14732 288 aa13.12□□□□□ -0.31
NUP58-211ENST00000480187 COX4I1P13073 169 aa13.12□□□□□ -0.31
NUP58-211ENST00000480187 MTNR1AP48039 350 aa13.12□□□□□ -0.31
NUP58-211ENST00000480187 GSK3BP49841 420 aa13.12□□□□□ -0.31
NUP58-211ENST00000480187 RPS6KA3P51812 740 aa13.12□□□□□ -0.31
NUP58-211ENST00000480187 FXYD6P3P58550 94 aa13.12□□□□□ -0.31
NUP58-211ENST00000480187 GNB2P62879 340 aa13.12□□□□□ -0.31
NUP58-211ENST00000480187 IL13RA1P78552 427 aa13.12□□□□□ -0.31
NUP58-211ENST00000480187 DNM1P34Q6PK57 102 aa13.12□□□□□ -0.31
NUP58-211ENST00000480187 KLBQ86Z14 1044 aa13.12□□□□□ -0.31
NUP58-211ENST00000480187 RAB40AQ8WXH6 277 aa13.12□□□□□ -0.31
NUP58-211ENST00000480187 FAM162AQ96A26 154 aa13.12□□□□□ -0.31
NUP58-211ENST00000480187 UPRTQ96BW1 309 aa13.12□□□□□ -0.31
NUP58-211ENST00000480187 RSRC1Q96IZ7 334 aaKnown RBP13.12□□□□□ -0.31
NUP58-211ENST00000480187 PLEKHA8Q96JA3 519 aa13.12□□□□□ -0.31
NUP58-211ENST00000480187 KRCC1Q9NPI7 259 aaPredicted RBP13.12□□□□□ -0.31
NUP58-211ENST00000480187 RPS6KA6Q9UK32 745 aa13.12□□□□□ -0.31
NUP58-211ENST00000480187 POLR1DQ9Y2S0 133 aa13.12□□□□□ -0.31
NUP58-211ENST00000480187 IER3IP1Q9Y5U9 82 aa13.12□□□□□ -0.31
NUP58-211ENST00000480187 LRRC30A6NM36 301 aa13.11□□□□□ -0.31
NUP58-211ENST00000480187 POM121CA8CG34 1229 aa13.11□□□□□ -0.31
NUP58-211ENST00000480187 H0YL77 283 aa13.11□□□□□ -0.31
NUP58-211ENST00000480187 MLNRO43193 412 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms