RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 TMEM255AQ5JRV8 349 aa13.68□□□□□ -0.22
COPS3-207ENST00000477299 SPATA46Q5T0L3 261 aa13.68□□□□□ -0.22
COPS3-207ENST00000477299 LCN1P1Q5VSP4 162 aa13.68□□□□□ -0.22
COPS3-207ENST00000477299 RFPL4BQ6ZWI9 263 aa13.68□□□□□ -0.22
COPS3-207ENST00000477299 SSX6Q7RTT6 188 aa13.68□□□□□ -0.22
COPS3-207ENST00000477299 SLC35F2Q8IXU6 374 aa13.68□□□□□ -0.22
COPS3-207ENST00000477299 IL17RDQ8NFM7 739 aa13.68□□□□□ -0.22
COPS3-207ENST00000477299 RNFT2Q96EX2 444 aa13.68□□□□□ -0.22
COPS3-207ENST00000477299 LURAP1Q96LR2 239 aa13.68□□□□□ -0.22
COPS3-207ENST00000477299 CNN2Q99439 309 aaKnown RBP13.68□□□□□ -0.22
COPS3-207ENST00000477299 APOL4Q9BPW4 351 aa13.68□□□□□ -0.22
COPS3-207ENST00000477299 CLN6Q9NWW5 311 aa13.68□□□□□ -0.22
COPS3-207ENST00000477299 SLCO1C1Q9NYB5 712 aa13.68□□□□□ -0.22
COPS3-207ENST00000477299 HAO2Q9NYQ3 351 aa13.68□□□□□ -0.22
COPS3-207ENST00000477299 WARS2Q9UGM6 360 aaKnown RBP13.68□□□□□ -0.22
COPS3-207ENST00000477299 FBXL3Q9UKT7 428 aa13.68□□□□□ -0.22
COPS3-207ENST00000477299 PCDHGB5Q9Y5G0 923 aa13.68□□□□□ -0.22
COPS3-207ENST00000477299 USF3Q68DE3 2245 aa13.67□□□□□ -0.22
COPS3-207ENST00000477299 H0YJX3 145 aa13.67□□□□□ -0.22
COPS3-207ENST00000477299 TMCC2O75069 709 aa13.67□□□□□ -0.22
COPS3-207ENST00000477299 GOSR1O95249 250 aa13.67□□□□□ -0.22
COPS3-207ENST00000477299 PTHP01270 115 aa13.67□□□□□ -0.22
COPS3-207ENST00000477299 DANCRP0C864 163 aa13.67□□□□□ -0.22
COPS3-207ENST00000477299 COX5BP10606 129 aa13.67□□□□□ -0.22
COPS3-207ENST00000477299 VHLP40337 213 aa13.67□□□□□ -0.22
COPS3-207ENST00000477299 UCP2P55851 309 aa13.67□□□□□ -0.22
COPS3-207ENST00000477299 PRSS12P56730 875 aa13.67□□□□□ -0.22
COPS3-207ENST00000477299 ZNF91Q05481 1191 aa13.67□□□□□ -0.22
COPS3-207ENST00000477299 CDK5R2Q13319 367 aa13.67□□□□□ -0.22
COPS3-207ENST00000477299 MST1LQ2TV78 715 aa13.67□□□□□ -0.22
COPS3-207ENST00000477299 LRRN1Q6UXK5 716 aa13.67□□□□□ -0.22
COPS3-207ENST00000477299 OR1J2Q8NGS2 313 aa13.67□□□□□ -0.22
COPS3-207ENST00000477299 TMEM171Q8WVE6 324 aa13.67□□□□□ -0.22
COPS3-207ENST00000477299 RNF133Q8WVZ7 376 aa13.67□□□□□ -0.22
COPS3-207ENST00000477299 LGALS12Q96DT0 336 aa13.67□□□□□ -0.22
COPS3-207ENST00000477299 C4orf45Q96LM5 186 aa13.67□□□□□ -0.22
COPS3-207ENST00000477299 COQ7Q99807 217 aa13.67□□□□□ -0.22
COPS3-207ENST00000477299 ATF6BQ99941 703 aa13.67□□□□□ -0.22
COPS3-207ENST00000477299 YIPF3Q9GZM5 350 aa13.67□□□□□ -0.22
COPS3-207ENST00000477299 HDHD2Q9H0R4 259 aa13.67□□□□□ -0.22
COPS3-207ENST00000477299 VCXQ9H320 206 aa13.67□□□□□ -0.22
COPS3-207ENST00000477299 MOV10Q9HCE1 1003 aaKnown RBP13.67□□□□□ -0.22
COPS3-207ENST00000477299 CA10Q9NS85 328 aa13.67□□□□□ -0.22
COPS3-207ENST00000477299 MYEF2Q9P2K5 600 aaKnown RBP13.67□□□□□ -0.22
COPS3-207ENST00000477299 MYRFQ9Y2G1 1151 aa13.67□□□□□ -0.22
COPS3-207ENST00000477299 PLEKHA6Q9Y2H5 1048 aa13.67□□□□□ -0.22
COPS3-207ENST00000477299 STARD10Q9Y365 291 aa13.67□□□□□ -0.22
COPS3-207ENST00000477299 TMEM129A0AVI4 362 aa13.66□□□□□ -0.22
COPS3-207ENST00000477299 SMPD2O60906 423 aa13.66□□□□□ -0.22
COPS3-207ENST00000477299 CLPTM1O96005 669 aa13.66□□□□□ -0.22
COPS3-207ENST00000477299 LYNP07948 512 aa13.66□□□□□ -0.22
COPS3-207ENST00000477299 ACSM4P0C7M7 580 aa13.66□□□□□ -0.22
COPS3-207ENST00000477299 SLC2A1P11166 492 aa13.66□□□□□ -0.22
COPS3-207ENST00000477299 MTNR1AP48039 350 aa13.66□□□□□ -0.22
COPS3-207ENST00000477299 FABP6P51161 128 aa13.66□□□□□ -0.22
COPS3-207ENST00000477299 ADIPOQQ15848 244 aa13.66□□□□□ -0.22
COPS3-207ENST00000477299 MEDAGQ5VYS4 303 aa13.66□□□□□ -0.22
COPS3-207ENST00000477299 ZNF611Q8N823 705 aa13.66□□□□□ -0.22
COPS3-207ENST00000477299 ABHD4Q8TB40 342 aa13.66□□□□□ -0.22
COPS3-207ENST00000477299 FBXW5Q969U6 566 aa13.66□□□□□ -0.22
COPS3-207ENST00000477299 DHRS9Q9BPW9 319 aa13.66□□□□□ -0.22
COPS3-207ENST00000477299 DDX28Q9NUL7 540 aaKnown RBP13.66□□□□□ -0.22
COPS3-207ENST00000477299 LAMP5Q9UJQ1 280 aa13.66□□□□□ -0.22
COPS3-207ENST00000477299 LAMP3Q9UQV4 416 aa13.66□□□□□ -0.22
COPS3-207ENST00000477299 N6AMT1Q9Y5N5 214 aa13.66□□□□□ -0.22
COPS3-207ENST00000477299 CSMD2Q7Z408 3487 aa13.66□□□□□ -0.22
COPS3-207ENST00000477299 J3QRE1 110 aa13.65□□□□□ -0.22
COPS3-207ENST00000477299 MPZL2O60487 215 aa13.65□□□□□ -0.22
COPS3-207ENST00000477299 LCKP06239 509 aa13.65□□□□□ -0.22
COPS3-207ENST00000477299 OR4A8P0C604 315 aa13.65□□□□□ -0.22
COPS3-207ENST00000477299 DBTP11182 482 aaKnown RBP13.65□□□□□ -0.22
COPS3-207ENST00000477299 GLRXP35754 106 aa13.65□□□□□ -0.22
COPS3-207ENST00000477299 MPV17P39210 176 aa13.65□□□□□ -0.22
COPS3-207ENST00000477299 OPRL1P41146 370 aa13.65□□□□□ -0.22
COPS3-207ENST00000477299 CXCR4P61073 352 aa13.65□□□□□ -0.22
COPS3-207ENST00000477299 ZNF85Q03923 595 aa13.65□□□□□ -0.22
COPS3-207ENST00000477299 ALKBH6Q3KRA9 238 aa13.65□□□□□ -0.22
COPS3-207ENST00000477299 PLEKHG7Q6ZR37 379 aa13.65□□□□□ -0.22
COPS3-207ENST00000477299 C8orf59Q8N0T1 100 aaPredicted RBP13.65□□□□□ -0.22
COPS3-207ENST00000477299 ZNF454Q8N9F8 522 aa13.65□□□□□ -0.22
COPS3-207ENST00000477299 NUP37Q8NFH4 326 aa13.65□□□□□ -0.22
COPS3-207ENST00000477299 OR10H4Q8NGA5 316 aa13.65□□□□□ -0.22
COPS3-207ENST00000477299 OR1J1Q8NGS3 322 aa13.65□□□□□ -0.22
COPS3-207ENST00000477299 SLC25A40Q8TBP6 338 aa13.65□□□□□ -0.22
COPS3-207ENST00000477299 FBLIM1Q8WUP2 373 aa13.65□□□□□ -0.22
COPS3-207ENST00000477299 IGFBPL1Q8WX77 278 aa13.65□□□□□ -0.22
COPS3-207ENST00000477299 RFKQ969G6 155 aa13.65□□□□□ -0.22
COPS3-207ENST00000477299 PPP1R14AQ96A00 147 aa13.65□□□□□ -0.22
COPS3-207ENST00000477299 COPS4Q9BT78 406 aa13.65□□□□□ -0.22
COPS3-207ENST00000477299 MRPL37Q9BZE1 423 aaKnown RBP13.65□□□□□ -0.22
COPS3-207ENST00000477299 OR2J1Q9GZK6 312 aa13.65□□□□□ -0.22
COPS3-207ENST00000477299 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.65□□□□□ -0.22
COPS3-207ENST00000477299 EXOGQ9Y2C4 368 aaKnown RBP13.65□□□□□ -0.22
COPS3-207ENST00000477299 A0A1W2PQL4 384 aaPredicted RBP13.64□□□□□ -0.23
COPS3-207ENST00000477299 ZNF878C9JN71 531 aa13.64□□□□□ -0.23
COPS3-207ENST00000477299 XPNPEP2O43895 674 aa13.64□□□□□ -0.23
COPS3-207ENST00000477299 ABHD16AO95870 558 aa13.64□□□□□ -0.23
COPS3-207ENST00000477299 APOBEC3AP31941 199 aaPredicted RBP13.64□□□□□ -0.23
COPS3-207ENST00000477299 OTX1P32242 354 aaPredicted RBP13.64□□□□□ -0.23
COPS3-207ENST00000477299 TTKP33981 857 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms