RNA–Protein interactions for RNA: ENST00000476739.5

HDAC3-208, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 422 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-208ENST00000476739 COX5BP10606 129 aa8.31□□□□□ -1.08
HDAC3-208ENST00000476739 ZNF250P15622 560 aa8.31□□□□□ -1.08
HDAC3-208ENST00000476739 ZNF823P16415 610 aa8.31□□□□□ -1.08
HDAC3-208ENST00000476739 SLC2A5P22732 501 aa8.31□□□□□ -1.08
HDAC3-208ENST00000476739 MPV17P39210 176 aa8.31□□□□□ -1.08
HDAC3-208ENST00000476739 RAD52P43351 418 aa8.31□□□□□ -1.08
HDAC3-208ENST00000476739 SNAPC1Q16533 368 aa8.31□□□□□ -1.08
HDAC3-208ENST00000476739 CLEC12BQ2HXU8 276 aa8.31□□□□□ -1.08
HDAC3-208ENST00000476739 KRTAP27-1Q3LI81 207 aa8.31□□□□□ -1.08
HDAC3-208ENST00000476739 ELFN2Q5R3F8 820 aa8.31□□□□□ -1.08
HDAC3-208ENST00000476739 ZFP1Q6P2D0 407 aa8.31□□□□□ -1.08
HDAC3-208ENST00000476739 DNM1P46Q6ZS02 220 aa8.31□□□□□ -1.08
HDAC3-208ENST00000476739 BCDIN3DQ7Z5W3 292 aaKnown RBP8.31□□□□□ -1.08
HDAC3-208ENST00000476739 ZNF554Q86TJ5 538 aa8.31□□□□□ -1.08
HDAC3-208ENST00000476739 NAA40Q86UY6 237 aa8.31□□□□□ -1.08
HDAC3-208ENST00000476739 ABHD4Q8TB40 342 aa8.31□□□□□ -1.08
HDAC3-208ENST00000476739 GTF3AQ92664 365 aaKnown RBP8.31□□□□□ -1.08
HDAC3-208ENST00000476739 ZMYND19Q96E35 227 aaPredicted RBP8.31□□□□□ -1.08
HDAC3-208ENST00000476739 MARS2Q96GW9 593 aaKnown RBP8.31□□□□□ -1.08
HDAC3-208ENST00000476739 CDADC1Q9BWV3 514 aa8.31□□□□□ -1.08
HDAC3-208ENST00000476739 BCL2L14Q9BZR8 327 aa8.31□□□□□ -1.08
HDAC3-208ENST00000476739 OR2J1Q9GZK6 312 aa8.31□□□□□ -1.08
HDAC3-208ENST00000476739 OR51V1Q9H2C8 321 aa8.31□□□□□ -1.08
HDAC3-208ENST00000476739 TPK1Q9H3S4 243 aa8.31□□□□□ -1.08
HDAC3-208ENST00000476739 DLL4Q9NR61 685 aa8.31□□□□□ -1.08
HDAC3-208ENST00000476739 NDRG4Q9ULP0 352 aaKnown RBP8.31□□□□□ -1.08
HDAC3-208ENST00000476739 GRIP1Q9Y3R0 1128 aa8.31□□□□□ -1.08
HDAC3-208ENST00000476739 PMF1-BGLAPU3KQ54 211 aa8.31□□□□□ -1.08
HDAC3-208ENST00000476739 IGLV3-9A0A075B6K5 115 aa8.3□□□□□ -1.08
HDAC3-208ENST00000476739 ZAR1LA6NP61 321 aa8.3□□□□□ -1.08
HDAC3-208ENST00000476739 VSTM5A8MXK1 200 aa8.3□□□□□ -1.08
HDAC3-208ENST00000476739 PRR23D1E9PI22 279 aaPredicted RBP8.3□□□□□ -1.08
HDAC3-208ENST00000476739 ZNF593O00488 134 aaPredicted RBP8.3□□□□□ -1.08
HDAC3-208ENST00000476739 ATP6V1G1O75348 118 aa8.3□□□□□ -1.08
HDAC3-208ENST00000476739 GLCEO94923 617 aa8.3□□□□□ -1.08
HDAC3-208ENST00000476739 ABHD16AO95870 558 aa8.3□□□□□ -1.08
HDAC3-208ENST00000476739 HMGN1P05114 100 aa8.3□□□□□ -1.08
HDAC3-208ENST00000476739 SPARCP09486 303 aa8.3□□□□□ -1.08
HDAC3-208ENST00000476739 PRR23D2P0DMB1 279 aaPredicted RBP8.3□□□□□ -1.08
HDAC3-208ENST00000476739 NAT2P11245 290 aa8.3□□□□□ -1.08
HDAC3-208ENST00000476739 CD99P14209 185 aa8.3□□□□□ -1.08
HDAC3-208ENST00000476739 IGFBP5P24593 272 aa8.3□□□□□ -1.08
HDAC3-208ENST00000476739 FMO3P31513 532 aa8.3□□□□□ -1.08
HDAC3-208ENST00000476739 EVX1P49640 407 aa8.3□□□□□ -1.08
HDAC3-208ENST00000476739 ENTPD1P49961 510 aa8.3□□□□□ -1.08
HDAC3-208ENST00000476739 PPOXP50336 477 aa8.3□□□□□ -1.08
HDAC3-208ENST00000476739 RPS23P62266 143 aaKnown RBP8.3□□□□□ -1.08
HDAC3-208ENST00000476739 ESRRGP62508 458 aa8.3□□□□□ -1.08
HDAC3-208ENST00000476739 EFNB1P98172 346 aa8.3□□□□□ -1.08
HDAC3-208ENST00000476739 TNK1Q13470 666 aa8.3□□□□□ -1.08
HDAC3-208ENST00000476739 PCK2Q16822 640 aa8.3□□□□□ -1.08
HDAC3-208ENST00000476739 KLHL12Q53G59 568 aa8.3□□□□□ -1.08
HDAC3-208ENST00000476739 SLX4IPQ5VYV7 408 aa8.3□□□□□ -1.08
HDAC3-208ENST00000476739 C12orf73Q69YU5 71 aa8.3□□□□□ -1.08
HDAC3-208ENST00000476739 DCXRQ7Z4W1 244 aa8.3□□□□□ -1.08
HDAC3-208ENST00000476739 ZNF525Q8N782 197 aa8.3□□□□□ -1.08
HDAC3-208ENST00000476739 OR2AJ1Q8NGZ0 328 aa8.3□□□□□ -1.08
HDAC3-208ENST00000476739 SYNPRQ8TBG9 265 aa8.3□□□□□ -1.08
HDAC3-208ENST00000476739 KLF14Q8TD94 323 aaPredicted RBP8.3□□□□□ -1.08
HDAC3-208ENST00000476739 ITPKCQ96DU7 683 aa8.3□□□□□ -1.08
HDAC3-208ENST00000476739 AMELYQ99218 206 aa8.3□□□□□ -1.08
HDAC3-208ENST00000476739 PITX2Q99697 317 aa8.3□□□□□ -1.08
HDAC3-208ENST00000476739 COQ7Q99807 217 aa8.3□□□□□ -1.08
HDAC3-208ENST00000476739 SLC29A1Q99808 456 aa8.3□□□□□ -1.08
HDAC3-208ENST00000476739 SMR3AQ99954 134 aa8.3□□□□□ -1.08
HDAC3-208ENST00000476739 TAAR3PQ9P1P4 343 aa8.3□□□□□ -1.08
HDAC3-208ENST00000476739 EIF3KQ9UBQ5 218 aaKnown RBP8.3□□□□□ -1.08
HDAC3-208ENST00000476739 KCNG2Q9UJ96 466 aa8.3□□□□□ -1.08
HDAC3-208ENST00000476739 STARD10Q9Y365 291 aa8.3□□□□□ -1.08
HDAC3-208ENST00000476739 ITPR3Q14573 2671 aa8.3□□□□□ -1.08
HDAC3-208ENST00000476739 HIVEP1P15822 2718 aa8.29□□□□□ -1.08
HDAC3-208ENST00000476739 CELSR1Q9NYQ6 3014 aa8.29□□□□□ -1.08
HDAC3-208ENST00000476739 IGHV4-30-2A0A087WSY4 118 aa8.29□□□□□ -1.08
HDAC3-208ENST00000476739 A0A1W2PPW3 197 aa8.29□□□□□ -1.08
HDAC3-208ENST00000476739 C5orf63A6NC05 138 aa8.29□□□□□ -1.08
HDAC3-208ENST00000476739 CCDC182A6NF36 153 aa8.29□□□□□ -1.08
HDAC3-208ENST00000476739 F5H5K5 113 aa8.29□□□□□ -1.08
HDAC3-208ENST00000476739 H7C1Q1 480 aa8.29□□□□□ -1.08
HDAC3-208ENST00000476739 M0R233 179 aa8.29□□□□□ -1.08
HDAC3-208ENST00000476739 EI24O14681 340 aa8.29□□□□□ -1.08
HDAC3-208ENST00000476739 SELENOFO60613 162 aa8.29□□□□□ -1.08
HDAC3-208ENST00000476739 F12P00748 615 aaPredicted RBP8.29□□□□□ -1.08
HDAC3-208ENST00000476739 ALPLP05186 524 aa8.29□□□□□ -1.08
HDAC3-208ENST00000476739 ACSM4P0C7M7 580 aa8.29□□□□□ -1.08
HDAC3-208ENST00000476739 BMP4P12644 408 aa8.29□□□□□ -1.08
HDAC3-208ENST00000476739 EFNA4P52798 201 aa8.29□□□□□ -1.08
HDAC3-208ENST00000476739 NUDT6P53370 316 aa8.29□□□□□ -1.08
HDAC3-208ENST00000476739 HCCSP53701 268 aa8.29□□□□□ -1.08
HDAC3-208ENST00000476739 KLF3P57682 345 aaPredicted RBP8.29□□□□□ -1.08
HDAC3-208ENST00000476739 PPP1CBP62140 327 aa8.29□□□□□ -1.08
HDAC3-208ENST00000476739 TEX30Q5JUR7 227 aa8.29□□□□□ -1.08
HDAC3-208ENST00000476739 MBNL2Q5VZF2 373 aaKnown RBP8.29□□□□□ -1.08
HDAC3-208ENST00000476739 SPATC1Q76KD6 591 aa8.29□□□□□ -1.08
HDAC3-208ENST00000476739 CXXC5Q7LFL8 322 aaKnown RBP8.29□□□□□ -1.08
HDAC3-208ENST00000476739 DPY19L4Q7Z388 723 aa8.29□□□□□ -1.08
HDAC3-208ENST00000476739 ERI1Q8IV48 349 aaKnown RBP8.29□□□□□ -1.08
HDAC3-208ENST00000476739 TIGD4Q8IY51 512 aa8.29□□□□□ -1.08
HDAC3-208ENST00000476739 PQLC1Q8N2U9 271 aa8.29□□□□□ -1.08
HDAC3-208ENST00000476739 CBR4Q8N4T8 237 aa8.29□□□□□ -1.08
HDAC3-208ENST00000476739 MAPK1IP1LQ8NDC0 245 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms