RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 OR5F1O95221 314 aa9.93□□□□□ -0.82
HDAC6-219ENST00000476625 CFHR2P36980 270 aa9.93□□□□□ -0.82
HDAC6-219ENST00000476625 GPR4P46093 362 aa9.93□□□□□ -0.82
HDAC6-219ENST00000476625 SLC9A3P48764 834 aa9.93□□□□□ -0.82
HDAC6-219ENST00000476625 PROK1P58294 105 aa9.93□□□□□ -0.82
HDAC6-219ENST00000476625 PCBD1P61457 104 aa9.93□□□□□ -0.82
HDAC6-219ENST00000476625 MPPED2Q15777 294 aa9.93□□□□□ -0.82
HDAC6-219ENST00000476625 OCLNQ16625 522 aa9.93□□□□□ -0.82
HDAC6-219ENST00000476625 SFRP4Q6FHJ7 346 aaPredicted RBP9.93□□□□□ -0.82
HDAC6-219ENST00000476625 TBPL2Q6SJ96 375 aa9.93□□□□□ -0.82
HDAC6-219ENST00000476625 UNQ6126/PRO20091Q6UXV3 157 aa9.93□□□□□ -0.82
HDAC6-219ENST00000476625 NRMQ8IXM6 262 aa9.93□□□□□ -0.82
HDAC6-219ENST00000476625 C1orf174Q8IYL3 243 aa9.93□□□□□ -0.82
HDAC6-219ENST00000476625 BOLLQ8N9W6 283 aaKnown RBP9.93□□□□□ -0.82
HDAC6-219ENST00000476625 BPIFA2Q96DR5 249 aa9.93□□□□□ -0.82
HDAC6-219ENST00000476625 C7orf26Q96N11 449 aa9.93□□□□□ -0.82
HDAC6-219ENST00000476625 TECTBQ96PL2 329 aa9.93□□□□□ -0.82
HDAC6-219ENST00000476625 TMBIM4Q9HC24 238 aa9.93□□□□□ -0.82
HDAC6-219ENST00000476625 ASH2LQ9UBL3 628 aa9.93□□□□□ -0.82
HDAC6-219ENST00000476625 MIOXQ9UGB7 285 aa9.93□□□□□ -0.82
HDAC6-219ENST00000476625 RAB21Q9UL25 225 aa9.93□□□□□ -0.82
HDAC6-219ENST00000476625 NDUFAF1Q9Y375 327 aa9.93□□□□□ -0.82
HDAC6-219ENST00000476625 TET2Q6N021 2002 aaPredicted RBP9.93□□□□□ -0.82
HDAC6-219ENST00000476625 WNK1Q9H4A3 2382 aa9.93□□□□□ -0.82
HDAC6-219ENST00000476625 A0A1B0GW55 424 aa9.92□□□□□ -0.82
HDAC6-219ENST00000476625 OR6C6A6NF89 314 aa9.92□□□□□ -0.82
HDAC6-219ENST00000476625 NPIPB13A6NJU9 1138 aa9.92□□□□□ -0.82
HDAC6-219ENST00000476625 SLC22A31A6NKX4 558 aa9.92□□□□□ -0.82
HDAC6-219ENST00000476625 NPIPB4C9JG80 1138 aa9.92□□□□□ -0.82
HDAC6-219ENST00000476625 CDC42EP2O14613 210 aa9.92□□□□□ -0.82
HDAC6-219ENST00000476625 ANGPT2O15123 496 aa9.92□□□□□ -0.82
HDAC6-219ENST00000476625 FAM20BO75063 409 aa9.92□□□□□ -0.82
HDAC6-219ENST00000476625 DUX4L2P0CJ85 424 aa9.92□□□□□ -0.82
HDAC6-219ENST00000476625 DUX4L3P0CJ86 424 aa9.92□□□□□ -0.82
HDAC6-219ENST00000476625 DUX4L4P0CJ87 422 aa9.92□□□□□ -0.82
HDAC6-219ENST00000476625 DUX4L5P0CJ88 424 aa9.92□□□□□ -0.82
HDAC6-219ENST00000476625 DUX4L6P0CJ89 424 aa9.92□□□□□ -0.82
HDAC6-219ENST00000476625 DUX4L7P0CJ90 424 aa9.92□□□□□ -0.82
HDAC6-219ENST00000476625 PPIAL4GP0DN37 164 aa9.92□□□□□ -0.82
HDAC6-219ENST00000476625 MMP9P14780 707 aa9.92□□□□□ -0.82
HDAC6-219ENST00000476625 POU4F2Q12837 409 aa9.92□□□□□ -0.82
HDAC6-219ENST00000476625 MAB21L1Q13394 359 aa9.92□□□□□ -0.82
HDAC6-219ENST00000476625 LRRC23Q53EV4 343 aaPredicted RBP9.92□□□□□ -0.82
HDAC6-219ENST00000476625 GPR157Q5UAW9 335 aa9.92□□□□□ -0.82
HDAC6-219ENST00000476625 CORO6Q6QEF8 472 aa9.92□□□□□ -0.82
HDAC6-219ENST00000476625 DUX4L9Q6RFH8 374 aaPredicted RBP9.92□□□□□ -0.82
HDAC6-219ENST00000476625 Q6ZSV7 163 aa9.92□□□□□ -0.82
HDAC6-219ENST00000476625 CCDC80Q76M96 950 aa9.92□□□□□ -0.82
HDAC6-219ENST00000476625 ZER1Q7Z7L7 766 aa9.92□□□□□ -0.82
HDAC6-219ENST00000476625 NAA40Q86UY6 237 aa9.92□□□□□ -0.82
HDAC6-219ENST00000476625 CALHM3Q86XJ0 350 aa9.92□□□□□ -0.82
HDAC6-219ENST00000476625 DPP10Q8N608 796 aa9.92□□□□□ -0.82
HDAC6-219ENST00000476625 OR8G5Q8NG78 346 aa9.92□□□□□ -0.82
HDAC6-219ENST00000476625 PTP4A1Q93096 173 aa9.92□□□□□ -0.82
HDAC6-219ENST00000476625 LHX4Q969G2 390 aa9.92□□□□□ -0.82
HDAC6-219ENST00000476625 TPD52L3Q96J77 140 aa9.92□□□□□ -0.82
HDAC6-219ENST00000476625 MMADHCQ9H3L0 296 aaPredicted RBP9.92□□□□□ -0.82
HDAC6-219ENST00000476625 DUX4Q9UBX2 424 aa9.92□□□□□ -0.82
HDAC6-219ENST00000476625 CLN8Q9UBY8 286 aa9.92□□□□□ -0.82
HDAC6-219ENST00000476625 COA3Q9Y2R0 106 aaPredicted RBP9.92□□□□□ -0.82
HDAC6-219ENST00000476625 TEX13CA0A0J9YWL9 993 aa9.91□□□□□ -0.82
HDAC6-219ENST00000476625 C5orf63A6NC05 138 aa9.91□□□□□ -0.82
HDAC6-219ENST00000476625 FXYD1O00168 92 aa9.91□□□□□ -0.82
HDAC6-219ENST00000476625 TNFRSF13BO14836 293 aaPredicted RBP9.91□□□□□ -0.82
HDAC6-219ENST00000476625 TIMM23O14925 209 aa9.91□□□□□ -0.82
HDAC6-219ENST00000476625 TOX4O94842 621 aa9.91□□□□□ -0.82
HDAC6-219ENST00000476625 COX5BP10606 129 aa9.91□□□□□ -0.82
HDAC6-219ENST00000476625 SCRN3Q0VDG4 424 aa9.91□□□□□ -0.82
HDAC6-219ENST00000476625 SF3A3Q12874 501 aaKnown RBP eCLIP9.91□□□□□ -0.82
HDAC6-219ENST00000476625 TAF9Q16594 264 aa9.91□□□□□ -0.82
HDAC6-219ENST00000476625 CLEC12AQ5QGZ9 265 aa9.91□□□□□ -0.82
HDAC6-219ENST00000476625 ZNF362Q5T0B9 420 aaPredicted RBP9.91□□□□□ -0.82
HDAC6-219ENST00000476625 NANOGP8Q6NSW7 305 aa9.91□□□□□ -0.82
HDAC6-219ENST00000476625 ARL9Q6T311 187 aa9.91□□□□□ -0.82
HDAC6-219ENST00000476625 VTCN1Q7Z7D3 282 aa9.91□□□□□ -0.82
HDAC6-219ENST00000476625 OR1F12Q8NHA8 337 aa9.91□□□□□ -0.82
HDAC6-219ENST00000476625 TSSK2Q96PF2 358 aa9.91□□□□□ -0.82
HDAC6-219ENST00000476625 SLC30A2Q9BRI3 323 aa9.91□□□□□ -0.82
HDAC6-219ENST00000476625 TCF7L1Q9HCS4 588 aa9.91□□□□□ -0.82
HDAC6-219ENST00000476625 STX18Q9P2W9 335 aaKnown RBP9.91□□□□□ -0.82
HDAC6-219ENST00000476625 DNAJB11Q9UBS4 358 aa9.91□□□□□ -0.82
HDAC6-219ENST00000476625 A0A1W2PRD5 423 aa9.9□□□□□ -0.82
HDAC6-219ENST00000476625 A0A1W2PRF3 423 aa9.9□□□□□ -0.82
HDAC6-219ENST00000476625 A0A1W2PRM7 423 aa9.9□□□□□ -0.82
HDAC6-219ENST00000476625 EFCAB9A8MZ26 197 aa9.9□□□□□ -0.82
HDAC6-219ENST00000476625 DCTN6O00399 190 aa9.9□□□□□ -0.82
HDAC6-219ENST00000476625 FFAR1O14842 300 aa9.9□□□□□ -0.82
HDAC6-219ENST00000476625 SURF4O15260 269 aa9.9□□□□□ -0.82
HDAC6-219ENST00000476625 SLC16A7O60669 478 aa9.9□□□□□ -0.82
HDAC6-219ENST00000476625 CLPXO76031 633 aa9.9□□□□□ -0.82
HDAC6-219ENST00000476625 RAC2P15153 192 aa9.9□□□□□ -0.82
HDAC6-219ENST00000476625 SRP9P49458 86 aaKnown RBP9.9□□□□□ -0.82
HDAC6-219ENST00000476625 RSPO1Q2MKA7 263 aaPredicted RBP9.9□□□□□ -0.82
HDAC6-219ENST00000476625 CYBRD1Q53TN4 286 aa9.9□□□□□ -0.82
HDAC6-219ENST00000476625 INTS11Q5TA45 600 aaKnown RBP9.9□□□□□ -0.82
HDAC6-219ENST00000476625 FBXW12Q6X9E4 464 aa9.9□□□□□ -0.82
HDAC6-219ENST00000476625 ZNF620Q6ZNG0 422 aa9.9□□□□□ -0.82
HDAC6-219ENST00000476625 PTCHD4Q6ZW05 846 aa9.9□□□□□ -0.82
HDAC6-219ENST00000476625 SYT9Q86SS6 491 aa9.9□□□□□ -0.82
HDAC6-219ENST00000476625 OAFQ86UD1 273 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms