RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 PAX6P26367 422 aa9.99□□□□□ -0.81
VAPB-204ENST00000475243 SDHAP31040 664 aa9.99□□□□□ -0.81
VAPB-204ENST00000475243 IL10RAQ13651 578 aa9.99□□□□□ -0.81
VAPB-204ENST00000475243 ZNF718Q3SXZ3 478 aa9.99□□□□□ -0.81
VAPB-204ENST00000475243 THEM4Q5T1C6 240 aa9.99□□□□□ -0.81
VAPB-204ENST00000475243 TMEM200AQ86VY9 491 aa9.99□□□□□ -0.81
VAPB-204ENST00000475243 BCO1Q9HAY6 547 aa9.99□□□□□ -0.81
VAPB-204ENST00000475243 CSAG2Q9Y5P2 127 aa9.99□□□□□ -0.81
VAPB-204ENST00000475243 SLCO1B1Q9Y6L6 691 aa9.99□□□□□ -0.81
VAPB-204ENST00000475243 FCMRO60667 390 aa9.99□□□□□ -0.81
VAPB-204ENST00000475243 PI3P19957 117 aa9.99□□□□□ -0.81
VAPB-204ENST00000475243 MNX1P50219 401 aaPredicted RBP9.99□□□□□ -0.81
VAPB-204ENST00000475243 RPL18Q07020 188 aaKnown RBP9.99□□□□□ -0.81
VAPB-204ENST00000475243 CLN3Q13286 438 aa9.99□□□□□ -0.81
VAPB-204ENST00000475243 SPATA46Q5T0L3 261 aa9.99□□□□□ -0.81
VAPB-204ENST00000475243 OR52N1Q8NH53 320 aa9.99□□□□□ -0.81
VAPB-204ENST00000475243 ZNF2Q9BSG1 426 aaPredicted RBP9.99□□□□□ -0.81
VAPB-204ENST00000475243 FAM117AQ9C073 453 aa9.99□□□□□ -0.81
VAPB-204ENST00000475243 C4orf47A7E2U8 309 aa9.99□□□□□ -0.81
VAPB-204ENST00000475243 NRASP01111 189 aa9.99□□□□□ -0.81
VAPB-204ENST00000475243 SNRPGP62308 76 aaKnown RBP9.99□□□□□ -0.81
VAPB-204ENST00000475243 C15orf54Q8N8G6 183 aa9.99□□□□□ -0.81
VAPB-204ENST00000475243 BAHD1Q8TBE0 780 aaPredicted RBP9.99□□□□□ -0.81
VAPB-204ENST00000475243 TECTBQ96PL2 329 aa9.99□□□□□ -0.81
VAPB-204ENST00000475243 GAB2Q9UQC2 676 aa9.99□□□□□ -0.81
VAPB-204ENST00000475243 AQP7P3A6NL99 342 aa9.98□□□□□ -0.81
VAPB-204ENST00000475243 GFYI3L273 518 aa9.98□□□□□ -0.81
VAPB-204ENST00000475243 ABCD4O14678 606 aa9.98□□□□□ -0.81
VAPB-204ENST00000475243 PMS2P2O95744 297 aa9.98□□□□□ -0.81
VAPB-204ENST00000475243 HLA-HP01893 362 aa9.98□□□□□ -0.81
VAPB-204ENST00000475243 GPR12P47775 334 aa9.98□□□□□ -0.81
VAPB-204ENST00000475243 RAC1P63000 192 aa9.98□□□□□ -0.81
VAPB-204ENST00000475243 FAM109AQ8N4B1 249 aa9.98□□□□□ -0.81
VAPB-204ENST00000475243 OR8U1Q8NH10 309 aa9.98□□□□□ -0.81
VAPB-204ENST00000475243 KCNG2Q9UJ96 466 aa9.98□□□□□ -0.81
VAPB-204ENST00000475243 OR2A25A4D2G3 310 aa9.98□□□□□ -0.81
VAPB-204ENST00000475243 M0R135 149 aa9.98□□□□□ -0.81
VAPB-204ENST00000475243 GLAP06280 429 aa9.98□□□□□ -0.81
VAPB-204ENST00000475243 BAMBIQ13145 260 aa9.98□□□□□ -0.81
VAPB-204ENST00000475243 LGI3Q8N145 548 aa9.98□□□□□ -0.81
VAPB-204ENST00000475243 OR2L13Q8N349 312 aa9.98□□□□□ -0.81
VAPB-204ENST00000475243 OR52H1Q8NGJ2 320 aa9.98□□□□□ -0.81
VAPB-204ENST00000475243 FGF14Q92915 247 aa9.98□□□□□ -0.81
VAPB-204ENST00000475243 SLC25A46Q96AG3 418 aa9.98□□□□□ -0.81
VAPB-204ENST00000475243 TRMT61AQ96FX7 289 aaKnown RBP9.98□□□□□ -0.81
VAPB-204ENST00000475243 ZNF799Q96GE5 643 aa9.98□□□□□ -0.81
VAPB-204ENST00000475243 HINT3Q9NQE9 182 aaKnown RBP9.98□□□□□ -0.81
VAPB-204ENST00000475243 RNF150Q9ULK6 438 aa9.98□□□□□ -0.81
VAPB-204ENST00000475243 C19orf53Q9UNZ5 99 aaPredicted RBP9.98□□□□□ -0.81
VAPB-204ENST00000475243 TCRBV5S1A1TA0A578 114 aa9.98□□□□□ -0.81
VAPB-204ENST00000475243 PRSS36Q5K4E3 855 aa9.98□□□□□ -0.81
VAPB-204ENST00000475243 LAIR1Q6GTX8 287 aa9.98□□□□□ -0.81
VAPB-204ENST00000475243 PLPP6Q8IY26 295 aa9.98□□□□□ -0.81
VAPB-204ENST00000475243 CISD2Q8N5K1 135 aaKnown RBP9.98□□□□□ -0.81
VAPB-204ENST00000475243 BCL7CQ8WUZ0 217 aaPredicted RBP9.98□□□□□ -0.81
VAPB-204ENST00000475243 COL16A1Q07092 1604 aaPredicted RBP9.98□□□□□ -0.81
VAPB-204ENST00000475243 UBE2MP61081 183 aaKnown RBP9.98□□□□□ -0.81
VAPB-204ENST00000475243 HAGHQ16775 308 aa9.98□□□□□ -0.81
VAPB-204ENST00000475243 OR52N5Q8NH56 324 aa9.98□□□□□ -0.81
VAPB-204ENST00000475243 SLC25A43Q8WUT9 341 aaPredicted RBP9.98□□□□□ -0.81
VAPB-204ENST00000475243 TMEM174Q8WUU8 243 aa9.98□□□□□ -0.81
VAPB-204ENST00000475243 SLCO5A1Q9H2Y9 848 aa9.98□□□□□ -0.81
VAPB-204ENST00000475243 ZCCHC4Q9H5U6 513 aa9.98□□□□□ -0.81
VAPB-204ENST00000475243 LOXL2Q9Y4K0 774 aa9.98□□□□□ -0.81
VAPB-204ENST00000475243 PLCH1Q4KWH8 1693 aa9.98□□□□□ -0.81
VAPB-204ENST00000475243 HMX2A2RU54 273 aa9.98□□□□□ -0.81
VAPB-204ENST00000475243 KRBOX1C9JBD0 128 aa9.98□□□□□ -0.81
VAPB-204ENST00000475243 CCL7P80098 99 aa9.98□□□□□ -0.81
VAPB-204ENST00000475243 V9GYS6 101 aa9.98□□□□□ -0.81
VAPB-204ENST00000475243 ZFC3H1O60293 1989 aaKnown RBP9.98□□□□□ -0.81
VAPB-204ENST00000475243 DSCR3O14972 297 aa9.98□□□□□ -0.81
VAPB-204ENST00000475243 CTSLP07711 333 aa9.98□□□□□ -0.81
VAPB-204ENST00000475243 DUSP1P28562 367 aa9.98□□□□□ -0.81
VAPB-204ENST00000475243 CDAP32320 146 aa9.98□□□□□ -0.81
VAPB-204ENST00000475243 NKX2-1P43699 371 aaPredicted RBP9.98□□□□□ -0.81
VAPB-204ENST00000475243 FABP6P51161 128 aa9.98□□□□□ -0.81
VAPB-204ENST00000475243 PDZD11Q5EBL8 140 aa9.98□□□□□ -0.81
VAPB-204ENST00000475243 LYSMD2Q8IV50 215 aa9.98□□□□□ -0.81
VAPB-204ENST00000475243 CXCL13O43927 109 aa9.97□□□□□ -0.81
VAPB-204ENST00000475243 GLB1P16278 677 aa9.97□□□□□ -0.81
VAPB-204ENST00000475243 SPI1P17947 270 aa9.97□□□□□ -0.81
VAPB-204ENST00000475243 DUSP8Q13202 625 aa9.97□□□□□ -0.81
VAPB-204ENST00000475243 SLC25A21Q9BQT8 299 aaPredicted RBP9.97□□□□□ -0.81
VAPB-204ENST00000475243 TIMM10BQ9Y5J6 103 aa9.97□□□□□ -0.81
VAPB-204ENST00000475243 FLVCR1Q9Y5Y0 555 aa9.97□□□□□ -0.81
VAPB-204ENST00000475243 PIKFYVEQ9Y2I7 2098 aa9.97□□□□□ -0.81
VAPB-204ENST00000475243 TMEM235A6NFC5 223 aa9.97□□□□□ -0.81
VAPB-204ENST00000475243 C2CD4DB7Z1M9 353 aa9.97□□□□□ -0.81
VAPB-204ENST00000475243 CTRB1P17538 263 aa9.97□□□□□ -0.81
VAPB-204ENST00000475243 CCR2P41597 374 aa9.97□□□□□ -0.81
VAPB-204ENST00000475243 ECI1P42126 302 aa9.97□□□□□ -0.81
VAPB-204ENST00000475243 CTRB2Q6GPI1 263 aa9.97□□□□□ -0.81
VAPB-204ENST00000475243 TMUB2Q71RG4 321 aa9.97□□□□□ -0.81
VAPB-204ENST00000475243 LILRB4Q8NHJ6 448 aa9.97□□□□□ -0.81
VAPB-204ENST00000475243 MZB1Q8WU39 189 aa9.97□□□□□ -0.81
VAPB-204ENST00000475243 MBOAT4Q96T53 435 aa9.97□□□□□ -0.81
VAPB-204ENST00000475243 ISG20L2Q9H9L3 353 aaKnown RBP9.97□□□□□ -0.81
VAPB-204ENST00000475243 PROCRQ9UNN8 238 aa9.97□□□□□ -0.81
VAPB-204ENST00000475243 CKAP5Q14008 2032 aa9.97□□□□□ -0.81
VAPB-204ENST00000475243 ZNF724A8MTY0 619 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms