RNA–Protein interactions for RNA: ENST00000474929.1

USP54-211, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 590 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-211ENST00000474929 PRPS1L1P21108 318 aa6.43□□□□□ -1.38
USP54-211ENST00000474929 PRKAA2P54646 552 aa6.43□□□□□ -1.38
USP54-211ENST00000474929 PSG4Q00888 419 aa6.43□□□□□ -1.38
USP54-211ENST00000474929 UAP1Q16222 522 aaPredicted RBP6.43□□□□□ -1.38
USP54-211ENST00000474929 LRRC10Q5BKY1 277 aa6.43□□□□□ -1.38
USP54-211ENST00000474929 CLEC12AQ5QGZ9 265 aa6.43□□□□□ -1.38
USP54-211ENST00000474929 C10orf128Q5T292 105 aa6.43□□□□□ -1.38
USP54-211ENST00000474929 FAM219BQ5XKK7 198 aa6.43□□□□□ -1.38
USP54-211ENST00000474929 FBXW12Q6X9E4 464 aa6.43□□□□□ -1.38
USP54-211ENST00000474929 COLCA1Q6ZS62 124 aa6.43□□□□□ -1.38
USP54-211ENST00000474929 SLC35D2Q76EJ3 337 aa6.43□□□□□ -1.38
USP54-211ENST00000474929 PNKDQ8N490 385 aa6.43□□□□□ -1.38
USP54-211ENST00000474929 Q8N7P7 452 aa6.43□□□□□ -1.38
USP54-211ENST00000474929 NOXO1Q8NFA2 376 aa6.43□□□□□ -1.38
USP54-211ENST00000474929 AKR7LQ8NHP1 331 aa6.43□□□□□ -1.38
USP54-211ENST00000474929 DNAJA4Q8WW22 397 aaPredicted RBP6.43□□□□□ -1.38
USP54-211ENST00000474929 RASD2Q96D21 266 aa6.43□□□□□ -1.38
USP54-211ENST00000474929 COQ8BQ96D53 544 aa6.43□□□□□ -1.38
USP54-211ENST00000474929 ECSITQ9BQ95 431 aa6.43□□□□□ -1.38
USP54-211ENST00000474929 DUSP26Q9BV47 211 aa6.43□□□□□ -1.38
USP54-211ENST00000474929 OR2H1Q9GZK4 316 aa6.43□□□□□ -1.38
USP54-211ENST00000474929 SLC22A4Q9H015 551 aa6.43□□□□□ -1.38
USP54-211ENST00000474929 ZDHHC18Q9NUE0 388 aa6.43□□□□□ -1.38
USP54-211ENST00000474929 BAIAP2L1Q9UHR4 511 aa6.43□□□□□ -1.38
USP54-211ENST00000474929 TIMM10BQ9Y5J6 103 aa6.43□□□□□ -1.38
USP54-211ENST00000474929 LYVE1Q9Y5Y7 322 aa6.43□□□□□ -1.38
USP54-211ENST00000474929 SORL1Q92673 2214 aa6.42□□□□□ -1.38
USP54-211ENST00000474929 A0A1B0GWJ7 208 aa6.42□□□□□ -1.38
USP54-211ENST00000474929 IQCF6A8MYZ5 107 aa6.42□□□□□ -1.38
USP54-211ENST00000474929 F5H5P2 479 aa6.42□□□□□ -1.38
USP54-211ENST00000474929 PLPP3O14495 311 aa6.42□□□□□ -1.38
USP54-211ENST00000474929 NDUFB3O43676 98 aa6.42□□□□□ -1.38
USP54-211ENST00000474929 SERPINE1P05121 402 aa6.42□□□□□ -1.38
USP54-211ENST00000474929 INHBAP08476 426 aa6.42□□□□□ -1.38
USP54-211ENST00000474929 ADORA3P0DMS8 318 aa6.42□□□□□ -1.38
USP54-211ENST00000474929 FPR3P25089 353 aa6.42□□□□□ -1.38
USP54-211ENST00000474929 GGT2P36268 569 aa6.42□□□□□ -1.38
USP54-211ENST00000474929 MTNR1BP49286 362 aa6.42□□□□□ -1.38
USP54-211ENST00000474929 DYNLT3P51808 116 aa6.42□□□□□ -1.38
USP54-211ENST00000474929 RAD23AP54725 363 aa6.42□□□□□ -1.38
USP54-211ENST00000474929 RAB25P57735 213 aa6.42□□□□□ -1.38
USP54-211ENST00000474929 TMEM95Q3KNT9 176 aa6.42□□□□□ -1.38
USP54-211ENST00000474929 FAM91A1Q658Y4 838 aa6.42□□□□□ -1.38
USP54-211ENST00000474929 PLBD1Q6P4A8 553 aa6.42□□□□□ -1.38
USP54-211ENST00000474929 OR2W3Q7Z3T1 314 aa6.42□□□□□ -1.38
USP54-211ENST00000474929 HMGN2P46Q86SG4 172 aa6.42□□□□□ -1.38
USP54-211ENST00000474929 SYT9Q86SS6 491 aa6.42□□□□□ -1.38
USP54-211ENST00000474929 ANKRD46Q86W74 232 aa6.42□□□□□ -1.38
USP54-211ENST00000474929 OR5AS1Q8N127 324 aa6.42□□□□□ -1.38
USP54-211ENST00000474929 OSR2Q8N2R0 312 aa6.42□□□□□ -1.38
USP54-211ENST00000474929 COMMD1Q8N668 190 aa6.42□□□□□ -1.38
USP54-211ENST00000474929 PCYOX1LQ8NBM8 494 aa6.42□□□□□ -1.38
USP54-211ENST00000474929 KLHL30-AS1Q8NEE0 82 aa6.42□□□□□ -1.38
USP54-211ENST00000474929 OR8U1Q8NH10 309 aa6.42□□□□□ -1.38
USP54-211ENST00000474929 OR5J2Q8NH18 312 aa6.42□□□□□ -1.38
USP54-211ENST00000474929 PIFOQ8TCI5 191 aa6.42□□□□□ -1.38
USP54-211ENST00000474929 MCHR2Q969V1 340 aa6.42□□□□□ -1.38
USP54-211ENST00000474929 NUF2Q9BZD4 464 aa6.42□□□□□ -1.38
USP54-211ENST00000474929 HEXA-AS1Q9H8Q6 139 aa6.42□□□□□ -1.38
USP54-211ENST00000474929 TMEM100Q9NV29 134 aa6.42□□□□□ -1.38
USP54-211ENST00000474929 MRPL15Q9P015 296 aaKnown RBP6.42□□□□□ -1.38
USP54-211ENST00000474929 MARCOQ9UEW3 520 aaPredicted RBP6.42□□□□□ -1.38
USP54-211ENST00000474929 ZNF232Q9UNY5 417 aa6.42□□□□□ -1.38
USP54-211ENST00000474929 IGLV1-36A0A0B4J1U3 117 aa6.41□□□□□ -1.38
USP54-211ENST00000474929 hCG_1809904A0A1W2PP81 198 aa6.41□□□□□ -1.38
USP54-211ENST00000474929 A0A1W2PPE2 198 aa6.41□□□□□ -1.38
USP54-211ENST00000474929 A0A1W2PPH5 198 aa6.41□□□□□ -1.38
USP54-211ENST00000474929 A0A1W2PQ09 198 aa6.41□□□□□ -1.38
USP54-211ENST00000474929 A0A1W2PR64 198 aa6.41□□□□□ -1.38
USP54-211ENST00000474929 A0A1W2PRV1 198 aa6.41□□□□□ -1.38
USP54-211ENST00000474929 MCIDASD6RGH6 385 aa6.41□□□□□ -1.38
USP54-211ENST00000474929 H0YAE9 185 aa6.41□□□□□ -1.38
USP54-211ENST00000474929 MLNRO43193 412 aa6.41□□□□□ -1.38
USP54-211ENST00000474929 GYPAP02724 150 aa6.41□□□□□ -1.38
USP54-211ENST00000474929 HCKP08631 526 aa6.41□□□□□ -1.38
USP54-211ENST00000474929 CST2P09228 141 aa6.41□□□□□ -1.38
USP54-211ENST00000474929 MUC1P15941 1255 aaPredicted RBP6.41□□□□□ -1.38
USP54-211ENST00000474929 CBLP22681 906 aa6.41□□□□□ -1.38
USP54-211ENST00000474929 PHBP35232 272 aa6.41□□□□□ -1.38
USP54-211ENST00000474929 CHI3L1P36222 383 aaPredicted RBP6.41□□□□□ -1.38
USP54-211ENST00000474929 SERPINB9P50453 376 aa6.41□□□□□ -1.38
USP54-211ENST00000474929 ZNF133P52736 654 aaPredicted RBP6.41□□□□□ -1.38
USP54-211ENST00000474929 ERVK-25P63136 954 aa6.41□□□□□ -1.38
USP54-211ENST00000474929 MZT1Q08AG7 82 aa6.41□□□□□ -1.38
USP54-211ENST00000474929 HIST3H3Q16695 136 aa6.41□□□□□ -1.38
USP54-211ENST00000474929 MICBQ29980 383 aa6.41□□□□□ -1.38
USP54-211ENST00000474929 RFTN2Q52LD8 501 aaPredicted RBP6.41□□□□□ -1.38
USP54-211ENST00000474929 ALG10BQ5I7T1 473 aa6.41□□□□□ -1.38
USP54-211ENST00000474929 FAM27BQ5VT28 67 aa6.41□□□□□ -1.38
USP54-211ENST00000474929 TEX36Q5VZQ5 186 aa6.41□□□□□ -1.38
USP54-211ENST00000474929 SFRP4Q6FHJ7 346 aaPredicted RBP6.41□□□□□ -1.38
USP54-211ENST00000474929 LINC00336Q6ZUF6 198 aa6.41□□□□□ -1.38
USP54-211ENST00000474929 C8orf86Q6ZUL3 223 aa6.41□□□□□ -1.38
USP54-211ENST00000474929 TMEM219Q86XT9 240 aa6.41□□□□□ -1.38
USP54-211ENST00000474929 LRRC34Q8IZ02 419 aa6.41□□□□□ -1.38
USP54-211ENST00000474929 CNPY4Q8N129 248 aa6.41□□□□□ -1.38
USP54-211ENST00000474929 C19orf18Q8NEA5 215 aa6.41□□□□□ -1.38
USP54-211ENST00000474929 OR4A15Q8NGL6 344 aa6.41□□□□□ -1.38
USP54-211ENST00000474929 OR52P1PQ8NH57 321 aa6.41□□□□□ -1.38
USP54-211ENST00000474929 FNDC8Q8TC99 324 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms