RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 NR1H2P55055 460 aa6.02□□□□□ -1.45
LIMD1-204ENST00000474665 CDC42P60953 191 aa6.02□□□□□ -1.45
LIMD1-204ENST00000474665 PCBD1P61457 104 aa6.02□□□□□ -1.45
LIMD1-204ENST00000474665 ERVS71-1P61550 626 aa6.02□□□□□ -1.45
LIMD1-204ENST00000474665 MAD2L1BPQ15013 274 aaPredicted RBP6.02□□□□□ -1.45
LIMD1-204ENST00000474665 RAB35Q15286 201 aa6.02□□□□□ -1.45
LIMD1-204ENST00000474665 MST1LQ2TV78 715 aa6.02□□□□□ -1.45
LIMD1-204ENST00000474665 DEFB113Q30KQ7 82 aa6.02□□□□□ -1.45
LIMD1-204ENST00000474665 ZNF672Q499Z4 452 aaPredicted RBP6.02□□□□□ -1.45
LIMD1-204ENST00000474665 SLC35D3Q5M8T2 416 aa6.02□□□□□ -1.45
LIMD1-204ENST00000474665 HIST2H2BDQ6DRA6 164 aa6.02□□□□□ -1.45
LIMD1-204ENST00000474665 TMEM53Q6P2H8 277 aa6.02□□□□□ -1.45
LIMD1-204ENST00000474665 TMEM154Q6P9G4 183 aa6.02□□□□□ -1.45
LIMD1-204ENST00000474665 DCXRQ7Z4W1 244 aa6.02□□□□□ -1.45
LIMD1-204ENST00000474665 NAA40Q86UY6 237 aa6.02□□□□□ -1.45
LIMD1-204ENST00000474665 ERI1Q8IV48 349 aaKnown RBP6.02□□□□□ -1.45
LIMD1-204ENST00000474665 DHRSXQ8N5I4 330 aa6.02□□□□□ -1.45
LIMD1-204ENST00000474665 SLC30A7Q8NEW0 376 aa6.02□□□□□ -1.45
LIMD1-204ENST00000474665 OR4F15Q8NGB8 312 aa6.02□□□□□ -1.45
LIMD1-204ENST00000474665 OR1F12Q8NHA8 337 aa6.02□□□□□ -1.45
LIMD1-204ENST00000474665 CNIH3Q8TBE1 160 aa6.02□□□□□ -1.45
LIMD1-204ENST00000474665 TMEM171Q8WVE6 324 aa6.02□□□□□ -1.45
LIMD1-204ENST00000474665 CYGBQ8WWM9 190 aa6.02□□□□□ -1.45
LIMD1-204ENST00000474665 AKAP1Q92667 903 aaKnown RBP eCLIP6.02□□□□□ -1.45
LIMD1-204ENST00000474665 RNF166Q96A37 237 aaPredicted RBP6.02□□□□□ -1.45
LIMD1-204ENST00000474665 COX4I2Q96KJ9 171 aa6.02□□□□□ -1.45
LIMD1-204ENST00000474665 INTS14Q96SY0 518 aa6.02□□□□□ -1.45
LIMD1-204ENST00000474665 ZNF649Q9BS31 505 aa6.02□□□□□ -1.45
LIMD1-204ENST00000474665 RHNO1Q9BSD3 238 aa6.02□□□□□ -1.45
LIMD1-204ENST00000474665 ABHD6Q9BV23 337 aa6.02□□□□□ -1.45
LIMD1-204ENST00000474665 POFUT1Q9H488 388 aa6.02□□□□□ -1.45
LIMD1-204ENST00000474665 ESRP2Q9H6T0 727 aaKnown RBP6.02□□□□□ -1.45
LIMD1-204ENST00000474665 RNF121Q9H920 327 aa6.02□□□□□ -1.45
LIMD1-204ENST00000474665 AMBNQ9NP70 447 aa6.02□□□□□ -1.45
LIMD1-204ENST00000474665 CCNB1IP1Q9NPC3 277 aa6.02□□□□□ -1.45
LIMD1-204ENST00000474665 NGBQ9NPG2 151 aa6.02□□□□□ -1.45
LIMD1-204ENST00000474665 DDX28Q9NUL7 540 aaKnown RBP6.02□□□□□ -1.45
LIMD1-204ENST00000474665 HAO2Q9NYQ3 351 aa6.02□□□□□ -1.45
LIMD1-204ENST00000474665 PCDHGB5Q9Y5G0 923 aa6.02□□□□□ -1.45
LIMD1-204ENST00000474665 WNK2Q9Y3S1 2297 aa6.02□□□□□ -1.45
LIMD1-204ENST00000474665 TMEM129A0AVI4 362 aa6.01□□□□□ -1.45
LIMD1-204ENST00000474665 C5orf49A4QMS7 147 aa6.01□□□□□ -1.45
LIMD1-204ENST00000474665 H0YAE9 185 aa6.01□□□□□ -1.45
LIMD1-204ENST00000474665 HS3ST1O14792 307 aa6.01□□□□□ -1.45
LIMD1-204ENST00000474665 MAGEB4O15481 346 aaPredicted RBP6.01□□□□□ -1.45
LIMD1-204ENST00000474665 SPRY1O43609 319 aaPredicted RBP6.01□□□□□ -1.45
LIMD1-204ENST00000474665 DOK2O60496 412 aa6.01□□□□□ -1.45
LIMD1-204ENST00000474665 GOSR1O95249 250 aa6.01□□□□□ -1.45
LIMD1-204ENST00000474665 SOD3P08294 240 aa6.01□□□□□ -1.45
LIMD1-204ENST00000474665 SPARCP09486 303 aa6.01□□□□□ -1.45
LIMD1-204ENST00000474665 SBK2P0C263 348 aa6.01□□□□□ -1.45
LIMD1-204ENST00000474665 COX5BP10606 129 aa6.01□□□□□ -1.45
LIMD1-204ENST00000474665 ZNF823P16415 610 aa6.01□□□□□ -1.45
LIMD1-204ENST00000474665 PAX7P23759 505 aa6.01□□□□□ -1.45
LIMD1-204ENST00000474665 THBS4P35443 961 aa6.01□□□□□ -1.45
LIMD1-204ENST00000474665 OPRL1P41146 370 aa6.01□□□□□ -1.45
LIMD1-204ENST00000474665 GUCA1AP43080 201 aaPredicted RBP6.01□□□□□ -1.45
LIMD1-204ENST00000474665 SLC15A1P46059 708 aa6.01□□□□□ -1.45
LIMD1-204ENST00000474665 BLVRAP53004 296 aa6.01□□□□□ -1.45
LIMD1-204ENST00000474665 NUDT6P53370 316 aa6.01□□□□□ -1.45
LIMD1-204ENST00000474665 CDH11P55287 796 aa6.01□□□□□ -1.45
LIMD1-204ENST00000474665 RPS7P62081 194 aaKnown RBP6.01□□□□□ -1.45
LIMD1-204ENST00000474665 ZNF91Q05481 1191 aa6.01□□□□□ -1.45
LIMD1-204ENST00000474665 SCRN3Q0VDG4 424 aa6.01□□□□□ -1.45
LIMD1-204ENST00000474665 ELFN2Q5R3F8 820 aa6.01□□□□□ -1.45
LIMD1-204ENST00000474665 ZNF684Q5T5D7 378 aa6.01□□□□□ -1.45
LIMD1-204ENST00000474665 TTC23Q5W5X9 447 aa6.01□□□□□ -1.45
LIMD1-204ENST00000474665 SLC22A25Q6T423 547 aa6.01□□□□□ -1.45
LIMD1-204ENST00000474665 IZUMO2Q6UXV1 221 aa6.01□□□□□ -1.45
LIMD1-204ENST00000474665 COLCA1Q6ZS62 124 aa6.01□□□□□ -1.45
LIMD1-204ENST00000474665 RFPL4BQ6ZWI9 263 aa6.01□□□□□ -1.45
LIMD1-204ENST00000474665 SPATC1Q76KD6 591 aa6.01□□□□□ -1.45
LIMD1-204ENST00000474665 SHFQ7M4L6 423 aa6.01□□□□□ -1.45
LIMD1-204ENST00000474665 SSX6Q7RTT6 188 aa6.01□□□□□ -1.45
LIMD1-204ENST00000474665 SLC16A9Q7RTY1 509 aa6.01□□□□□ -1.45
LIMD1-204ENST00000474665 PRSS45Q7RTY3 260 aa6.01□□□□□ -1.45
LIMD1-204ENST00000474665 GID4Q8IVV7 300 aa6.01□□□□□ -1.45
LIMD1-204ENST00000474665 PIAS4Q8N2W9 510 aaPredicted RBP6.01□□□□□ -1.45
LIMD1-204ENST00000474665 GJC3Q8NFK1 279 aa6.01□□□□□ -1.45
LIMD1-204ENST00000474665 OR10H5Q8NGA6 315 aa6.01□□□□□ -1.45
LIMD1-204ENST00000474665 OR6N2Q8NGY6 317 aa6.01□□□□□ -1.45
LIMD1-204ENST00000474665 OTOSQ8NHW6 89 aa6.01□□□□□ -1.45
LIMD1-204ENST00000474665 RNF133Q8WVZ7 376 aa6.01□□□□□ -1.45
LIMD1-204ENST00000474665 WACQ9BTA9 647 aa6.01□□□□□ -1.45
LIMD1-204ENST00000474665 TEX12Q9BXU0 123 aa6.01□□□□□ -1.45
LIMD1-204ENST00000474665 PRRG3Q9BZD7 231 aa6.01□□□□□ -1.45
LIMD1-204ENST00000474665 YIPF3Q9GZM5 350 aa6.01□□□□□ -1.45
LIMD1-204ENST00000474665 MOV10Q9HCE1 1003 aaKnown RBP6.01□□□□□ -1.45
LIMD1-204ENST00000474665 IMPAD1Q9NX62 359 aa6.01□□□□□ -1.45
LIMD1-204ENST00000474665 PLEK2Q9NYT0 353 aa6.01□□□□□ -1.45
LIMD1-204ENST00000474665 WARS2Q9UGM6 360 aaKnown RBP6.01□□□□□ -1.45
LIMD1-204ENST00000474665 POLR1DQ9Y2S0 133 aa6.01□□□□□ -1.45
LIMD1-204ENST00000474665 MEGF8Q7Z7M0 2845 aa6□□□□□ -1.45
LIMD1-204ENST00000474665 PKD1L1Q8TDX9 2849 aa6□□□□□ -1.45
LIMD1-204ENST00000474665 TGP01266 2768 aa6□□□□□ -1.45
LIMD1-204ENST00000474665 IQCMA0A1B0GVH7 501 aa6□□□□□ -1.45
LIMD1-204ENST00000474665 A0A1W2PQL4 384 aaPredicted RBP6□□□□□ -1.45
LIMD1-204ENST00000474665 SLC22A31A6NKX4 558 aa6□□□□□ -1.45
LIMD1-204ENST00000474665 PHF1O43189 567 aaPredicted RBP6□□□□□ -1.45
LIMD1-204ENST00000474665 SMPD2O60906 423 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms