RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 DDX28Q9NUL7 540 aaKnown RBP8.55□□□□□ -1.04
CCM2-204ENST00000470837 NDUFB11Q9NX14 153 aa8.55□□□□□ -1.04
CCM2-204ENST00000470837 ELOVL5Q9NYP7 299 aa8.55□□□□□ -1.04
CCM2-204ENST00000470837 Q9UFV3 132 aa8.55□□□□□ -1.04
CCM2-204ENST00000470837 RSL24D1Q9UHA3 163 aaKnown RBP8.55□□□□□ -1.04
CCM2-204ENST00000470837 ATPIF1Q9UII2 106 aa8.55□□□□□ -1.04
CCM2-204ENST00000470837 GSTK1Q9Y2Q3 226 aa8.55□□□□□ -1.04
CCM2-204ENST00000470837 N6AMT1Q9Y5N5 214 aa8.55□□□□□ -1.04
CCM2-204ENST00000470837 ACOD1A6NK06 481 aa8.54□□□□□ -1.04
CCM2-204ENST00000470837 M0R135 149 aa8.54□□□□□ -1.04
CCM2-204ENST00000470837 PLPP2O43688 288 aa8.54□□□□□ -1.04
CCM2-204ENST00000470837 PATE4P0C8F1 98 aa8.54□□□□□ -1.04
CCM2-204ENST00000470837 COX5BP10606 129 aa8.54□□□□□ -1.04
CCM2-204ENST00000470837 PSKH1P11801 424 aa8.54□□□□□ -1.04
CCM2-204ENST00000470837 MAPK3P27361 379 aaPredicted RBP8.54□□□□□ -1.04
CCM2-204ENST00000470837 CHRNB4P30926 498 aa8.54□□□□□ -1.04
CCM2-204ENST00000470837 MMP16P51512 607 aa8.54□□□□□ -1.04
CCM2-204ENST00000470837 CCR9P51686 369 aa8.54□□□□□ -1.04
CCM2-204ENST00000470837 PRKXP51817 358 aa8.54□□□□□ -1.04
CCM2-204ENST00000470837 GTF2A1P52655 376 aaPredicted RBP8.54□□□□□ -1.04
CCM2-204ENST00000470837 FOXG1P55316 489 aaPredicted RBP8.54□□□□□ -1.04
CCM2-204ENST00000470837 PSMA6P60900 246 aaKnown RBP8.54□□□□□ -1.04
CCM2-204ENST00000470837 HIST1H3AP68431 136 aa8.54□□□□□ -1.04
CCM2-204ENST00000470837 PSG4Q00888 419 aa8.54□□□□□ -1.04
CCM2-204ENST00000470837 TLE1Q04724 770 aa8.54□□□□□ -1.04
CCM2-204ENST00000470837 SLC25A35Q3KQZ1 300 aa8.54□□□□□ -1.04
CCM2-204ENST00000470837 CCDC92Q53HC0 331 aaPredicted RBP8.54□□□□□ -1.04
CCM2-204ENST00000470837 C1QTNF12Q5T7M4 302 aa8.54□□□□□ -1.04
CCM2-204ENST00000470837 HIST2H3PS2Q5TEC6 136 aa8.54□□□□□ -1.04
CCM2-204ENST00000470837 ZNF774Q6NX45 483 aa8.54□□□□□ -1.04
CCM2-204ENST00000470837 PAMR1Q6UXH9 720 aa8.54□□□□□ -1.04
CCM2-204ENST00000470837 ZNF704Q6ZNC4 412 aaPredicted RBP8.54□□□□□ -1.04
CCM2-204ENST00000470837 GDPGP1Q6ZNW5 385 aa8.54□□□□□ -1.04
CCM2-204ENST00000470837 HIST2H3AQ71DI3 136 aa8.54□□□□□ -1.04
CCM2-204ENST00000470837 SSX8Q7RTT4 187 aa8.54□□□□□ -1.04
CCM2-204ENST00000470837 FJX1Q86VR8 437 aa8.54□□□□□ -1.04
CCM2-204ENST00000470837 ANKRD13BQ86YJ7 626 aa8.54□□□□□ -1.04
CCM2-204ENST00000470837 OR1J2Q8NGS2 313 aa8.54□□□□□ -1.04
CCM2-204ENST00000470837 OR2G2Q8NGZ5 317 aa8.54□□□□□ -1.04
CCM2-204ENST00000470837 AKR7LQ8NHP1 331 aa8.54□□□□□ -1.04
CCM2-204ENST00000470837 TMEM203Q969S6 136 aa8.54□□□□□ -1.04
CCM2-204ENST00000470837 YIPF6Q96EC8 236 aa8.54□□□□□ -1.04
CCM2-204ENST00000470837 ZNF799Q96GE5 643 aa8.54□□□□□ -1.04
CCM2-204ENST00000470837 PGAM5Q96HS1 289 aa8.54□□□□□ -1.04
CCM2-204ENST00000470837 DMRTA2Q96SC8 542 aa8.54□□□□□ -1.04
CCM2-204ENST00000470837 OR52A1Q9UKL2 312 aa8.54□□□□□ -1.04
CCM2-204ENST00000470837 STUB1Q9UNE7 303 aa8.54□□□□□ -1.04
CCM2-204ENST00000470837 ZNF281Q9Y2X9 895 aa8.54□□□□□ -1.04
CCM2-204ENST00000470837 AMDHD2Q9Y303 409 aa8.54□□□□□ -1.04
CCM2-204ENST00000470837 GRIP1Q9Y3R0 1128 aa8.54□□□□□ -1.04
CCM2-204ENST00000470837 PRRC2CQ9Y520 2896 aaKnown RBP8.53□□□□□ -1.04
CCM2-204ENST00000470837 ARPC4-TTLL3A0A0A6YYG9 625 aa8.53□□□□□ -1.04
CCM2-204ENST00000470837 A6NHS1 94 aa8.53□□□□□ -1.04
CCM2-204ENST00000470837 A8MXE2 369 aa8.53□□□□□ -1.04
CCM2-204ENST00000470837 PRR32B1ATL7 298 aa8.53□□□□□ -1.04
CCM2-204ENST00000470837 B8ZZF3 427 aa8.53□□□□□ -1.04
CCM2-204ENST00000470837 E9PI62 339 aa8.53□□□□□ -1.04
CCM2-204ENST00000470837 C16orf97H3BN30 126 aa8.53□□□□□ -1.04
CCM2-204ENST00000470837 H3BSA7 217 aa8.53□□□□□ -1.04
CCM2-204ENST00000470837 ZNF701M0R085 212 aaPredicted RBP8.53□□□□□ -1.04
CCM2-204ENST00000470837 OGG1O15527 345 aa8.53□□□□□ -1.04
CCM2-204ENST00000470837 TBX1O43435 398 aa8.53□□□□□ -1.04
CCM2-204ENST00000470837 RGS9O75916 674 aaPredicted RBP8.53□□□□□ -1.04
CCM2-204ENST00000470837 ABHD16AO95870 558 aa8.53□□□□□ -1.04
CCM2-204ENST00000470837 LALBAP00709 142 aa8.53□□□□□ -1.04
CCM2-204ENST00000470837 CD1AP06126 327 aa8.53□□□□□ -1.04
CCM2-204ENST00000470837 UBCP0CG48 685 aaKnown RBP8.53□□□□□ -1.04
CCM2-204ENST00000470837 PSMB1P20618 241 aaKnown RBP8.53□□□□□ -1.04
CCM2-204ENST00000470837 CCNOP22674 350 aa8.53□□□□□ -1.04
CCM2-204ENST00000470837 GADD45AP24522 165 aa8.53□□□□□ -1.04
CCM2-204ENST00000470837 STOMP27105 288 aa8.53□□□□□ -1.04
CCM2-204ENST00000470837 SSX1Q16384 188 aa8.53□□□□□ -1.04
CCM2-204ENST00000470837 GABRA6Q16445 453 aa8.53□□□□□ -1.04
CCM2-204ENST00000470837 TBC1D28Q2M2D7 210 aa8.53□□□□□ -1.04
CCM2-204ENST00000470837 YIF1BQ5BJH7 314 aa8.53□□□□□ -1.04
CCM2-204ENST00000470837 TMEM244Q5VVB8 128 aa8.53□□□□□ -1.04
CCM2-204ENST00000470837 DMKNQ6E0U4 476 aaPredicted RBP8.53□□□□□ -1.04
CCM2-204ENST00000470837 FDX2Q6P4F2 183 aa8.53□□□□□ -1.04
CCM2-204ENST00000470837 ZNF474Q6S9Z5 364 aaPredicted RBP8.53□□□□□ -1.04
CCM2-204ENST00000470837 DRAM2Q6UX65 266 aa8.53□□□□□ -1.04
CCM2-204ENST00000470837 UNQ6126/PRO20091Q6UXV3 157 aa8.53□□□□□ -1.04
CCM2-204ENST00000470837 MDP1Q86V88 176 aa8.53□□□□□ -1.04
CCM2-204ENST00000470837 KBTBD8Q8NFY9 601 aa8.53□□□□□ -1.04
CCM2-204ENST00000470837 OR52H1Q8NGJ2 320 aa8.53□□□□□ -1.04
CCM2-204ENST00000470837 GPR148Q8TDV2 347 aa8.53□□□□□ -1.04
CCM2-204ENST00000470837 CA5BP1Q8WTZ4 195 aa8.53□□□□□ -1.04
CCM2-204ENST00000470837 TSEN15Q8WW01 171 aaKnown RBP8.53□□□□□ -1.04
CCM2-204ENST00000470837 GHSRQ92847 366 aa8.53□□□□□ -1.04
CCM2-204ENST00000470837 ISOC1Q96CN7 298 aa8.53□□□□□ -1.04
CCM2-204ENST00000470837 C4orf45Q96LM5 186 aa8.53□□□□□ -1.04
CCM2-204ENST00000470837 DCLRE1CQ96SD1 692 aaKnown RBP8.53□□□□□ -1.04
CCM2-204ENST00000470837 DOK1Q99704 481 aa8.53□□□□□ -1.04
CCM2-204ENST00000470837 PDCD1LG2Q9BQ51 273 aa8.53□□□□□ -1.04
CCM2-204ENST00000470837 CHCHD6Q9BRQ6 235 aa8.53□□□□□ -1.04
CCM2-204ENST00000470837 WNT5BQ9H1J7 359 aa8.53□□□□□ -1.04
CCM2-204ENST00000470837 OR10A2Q9H208 303 aa8.53□□□□□ -1.04
CCM2-204ENST00000470837 SLC17A5Q9NRA2 495 aa8.53□□□□□ -1.04
CCM2-204ENST00000470837 FRRS1LQ9P0K9 344 aa8.53□□□□□ -1.04
CCM2-204ENST00000470837 EIF3KQ9UBQ5 218 aaKnown RBP8.53□□□□□ -1.04
CCM2-204ENST00000470837 ST6GALNAC2Q9UJ37 374 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms