RNA–Protein interactions for RNA: ENST00000470076.1

COL7A1-208, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-208ENST00000470076 AUP1Q9Y679 476 aa14.72□□□□□ -0.05
COL7A1-208ENST00000470076 F5H0A9 414 aaPredicted RBP14.71□□□□□ -0.05
COL7A1-208ENST00000470076 TRAPPC2LH3BP13 241 aa14.71□□□□□ -0.05
COL7A1-208ENST00000470076 TMEM178BH3BS89 294 aa14.71□□□□□ -0.05
COL7A1-208ENST00000470076 RER1O15258 196 aa14.71□□□□□ -0.05
COL7A1-208ENST00000470076 TXNDC12O95881 172 aa14.71□□□□□ -0.05
COL7A1-208ENST00000470076 ZNF12P17014 697 aa14.71□□□□□ -0.05
COL7A1-208ENST00000470076 CPT2P23786 658 aa14.71□□□□□ -0.05
COL7A1-208ENST00000470076 CRABP1P29762 137 aa14.71□□□□□ -0.05
COL7A1-208ENST00000470076 ERFP50548 548 aa14.71□□□□□ -0.05
COL7A1-208ENST00000470076 RPS6KA3P51812 740 aa14.71□□□□□ -0.05
COL7A1-208ENST00000470076 UBA52P62987 128 aaKnown RBP14.71□□□□□ -0.05
COL7A1-208ENST00000470076 ZNF154Q13106 437 aa14.71□□□□□ -0.05
COL7A1-208ENST00000470076 TUSC1Q2TAM9 212 aa14.71□□□□□ -0.05
COL7A1-208ENST00000470076 ESCO2Q56NI9 601 aa14.71□□□□□ -0.05
COL7A1-208ENST00000470076 OTPQ5XKR4 325 aa14.71□□□□□ -0.05
COL7A1-208ENST00000470076 DNM1P34Q6PK57 102 aa14.71□□□□□ -0.05
COL7A1-208ENST00000470076 PTCHD4Q6ZW05 846 aa14.71□□□□□ -0.05
COL7A1-208ENST00000470076 ATG16L2Q8NAA4 619 aa14.71□□□□□ -0.05
COL7A1-208ENST00000470076 GJC3Q8NFK1 279 aa14.71□□□□□ -0.05
COL7A1-208ENST00000470076 APOBEC3DQ96AK3 386 aaPredicted RBP14.71□□□□□ -0.05
COL7A1-208ENST00000470076 HDHD2Q9H0R4 259 aa14.71□□□□□ -0.05
COL7A1-208ENST00000470076 GCM1Q9NP62 436 aa14.71□□□□□ -0.05
COL7A1-208ENST00000470076 IL20RAQ9UHF4 553 aa14.71□□□□□ -0.05
COL7A1-208ENST00000470076 NUP50Q9UKX7 468 aa14.71□□□□□ -0.05
COL7A1-208ENST00000470076 SAMD4AQ9UPU9 718 aaKnown RBP14.71□□□□□ -0.05
COL7A1-208ENST00000470076 INSIG2Q9Y5U4 225 aa14.71□□□□□ -0.05
COL7A1-208ENST00000470076 DOCK11Q5JSL3 2073 aa14.7□□□□□ -0.06
COL7A1-208ENST00000470076 TRBV4-1A0A0J9YWV2 114 aa14.7□□□□□ -0.06
COL7A1-208ENST00000470076 UNC119BA6NIH7 251 aa14.7□□□□□ -0.06
COL7A1-208ENST00000470076 IMPA2O14732 288 aa14.7□□□□□ -0.06
COL7A1-208ENST00000470076 SPRY1O43609 319 aaPredicted RBP14.7□□□□□ -0.06
COL7A1-208ENST00000470076 DBHP09172 617 aa14.7□□□□□ -0.06
COL7A1-208ENST00000470076 CDKN2AP42771 156 aaKnown RBP14.7□□□□□ -0.06
COL7A1-208ENST00000470076 MMP16P51512 607 aa14.7□□□□□ -0.06
COL7A1-208ENST00000470076 FXYD6P3P58550 94 aa14.7□□□□□ -0.06
COL7A1-208ENST00000470076 SEC61A1P61619 476 aaKnown RBP14.7□□□□□ -0.06
COL7A1-208ENST00000470076 HIST1H3AP68431 136 aa14.7□□□□□ -0.06
COL7A1-208ENST00000470076 HLXQ14774 488 aaPredicted RBP14.7□□□□□ -0.06
COL7A1-208ENST00000470076 HIST2H3PS2Q5TEC6 136 aa14.7□□□□□ -0.06
COL7A1-208ENST00000470076 SMARCD3Q6STE5 483 aa14.7□□□□□ -0.06
COL7A1-208ENST00000470076 HIST2H3AQ71DI3 136 aa14.7□□□□□ -0.06
COL7A1-208ENST00000470076 OR5AS1Q8N127 324 aa14.7□□□□□ -0.06
COL7A1-208ENST00000470076 OR8G5Q8NG78 346 aa14.7□□□□□ -0.06
COL7A1-208ENST00000470076 OR13G1Q8NGZ3 307 aa14.7□□□□□ -0.06
COL7A1-208ENST00000470076 C7orf34Q96L11 122 aa14.7□□□□□ -0.06
COL7A1-208ENST00000470076 GPA33Q99795 319 aa14.7□□□□□ -0.06
COL7A1-208ENST00000470076 COQ7Q99807 217 aa14.7□□□□□ -0.06
COL7A1-208ENST00000470076 MRI1Q9BV20 369 aa14.7□□□□□ -0.06
COL7A1-208ENST00000470076 DCAF13Q9NV06 445 aaKnown RBP14.7□□□□□ -0.06
COL7A1-208ENST00000470076 PTTG3PQ9NZH4 202 aa14.7□□□□□ -0.06
COL7A1-208ENST00000470076 OR5V1Q9UGF6 321 aa14.7□□□□□ -0.06
COL7A1-208ENST00000470076 LRCH1Q9Y2L9 728 aa14.7□□□□□ -0.06
COL7A1-208ENST00000470076 PPIAL4AQ9Y536 164 aa14.7□□□□□ -0.06
COL7A1-208ENST00000470076 PKD1L1Q8TDX9 2849 aa14.69□□□□□ -0.06
COL7A1-208ENST00000470076 GMNNO75496 209 aa14.69□□□□□ -0.06
COL7A1-208ENST00000470076 RBMXP38159 391 aaKnown RBP14.69□□□□□ -0.06
COL7A1-208ENST00000470076 SRP9P49458 86 aaKnown RBP14.69□□□□□ -0.06
COL7A1-208ENST00000470076 PSME3P61289 254 aa14.69□□□□□ -0.06
COL7A1-208ENST00000470076 KRT72Q14CN4 511 aa14.69□□□□□ -0.06
COL7A1-208ENST00000470076 SEC23BQ15437 767 aa14.69□□□□□ -0.06
COL7A1-208ENST00000470076 HSP90B2PQ58FF3 399 aa14.69□□□□□ -0.06
COL7A1-208ENST00000470076 AWAT1Q58HT5 328 aa14.69□□□□□ -0.06
COL7A1-208ENST00000470076 GLYATQ6IB77 296 aa14.69□□□□□ -0.06
COL7A1-208ENST00000470076 OR2T2Q6IF00 324 aa14.69□□□□□ -0.06
COL7A1-208ENST00000470076 DOK3Q7L591 496 aa14.69□□□□□ -0.06
COL7A1-208ENST00000470076 SIGLECL1Q8N7X8 197 aa14.69□□□□□ -0.06
COL7A1-208ENST00000470076 CMTM5Q96DZ9 223 aa14.69□□□□□ -0.06
COL7A1-208ENST00000470076 MEGF10Q96KG7 1140 aa14.69□□□□□ -0.06
COL7A1-208ENST00000470076 DHRS1Q96LJ7 313 aa14.69□□□□□ -0.06
COL7A1-208ENST00000470076 ZNF582Q96NG8 517 aaPredicted RBP14.69□□□□□ -0.06
COL7A1-208ENST00000470076 ZMAT3Q9HA38 289 aaKnown RBP14.69□□□□□ -0.06
COL7A1-208ENST00000470076 SPAG4Q9NPE6 437 aa14.69□□□□□ -0.06
COL7A1-208ENST00000470076 ZNF446Q9NWS9 450 aa14.69□□□□□ -0.06
COL7A1-208ENST00000470076 LHFPL6Q9Y693 200 aa14.69□□□□□ -0.06
COL7A1-208ENST00000470076 CEACAM18A8MTB9 384 aa14.68□□□□□ -0.06
COL7A1-208ENST00000470076 WNT2P09544 360 aa14.68□□□□□ -0.06
COL7A1-208ENST00000470076 EGR1P18146 543 aa14.68□□□□□ -0.06
COL7A1-208ENST00000470076 MDH1P40925 334 aaKnown RBP14.68□□□□□ -0.06
COL7A1-208ENST00000470076 CENPAP49450 140 aa14.68□□□□□ -0.06
COL7A1-208ENST00000470076 COX10Q12887 443 aa14.68□□□□□ -0.06
COL7A1-208ENST00000470076 FOXL1Q12952 345 aa14.68□□□□□ -0.06
COL7A1-208ENST00000470076 KLF17Q5JT82 389 aaPredicted RBP14.68□□□□□ -0.06
COL7A1-208ENST00000470076 OR10AD1Q8NGE0 317 aa14.68□□□□□ -0.06
COL7A1-208ENST00000470076 TSSK2Q96PF2 358 aa14.68□□□□□ -0.06
COL7A1-208ENST00000470076 ERMAPQ96PL5 475 aaPredicted RBP14.68□□□□□ -0.06
COL7A1-208ENST00000470076 SLC30A2Q9BRI3 323 aa14.68□□□□□ -0.06
COL7A1-208ENST00000470076 FUZQ9BT04 418 aa14.68□□□□□ -0.06
COL7A1-208ENST00000470076 ZNF69Q9UC07 566 aa14.68□□□□□ -0.06
COL7A1-208ENST00000470076 IGLV1-36A0A0B4J1U3 117 aa14.67□□□□□ -0.06
COL7A1-208ENST00000470076 IQCF6A8MYZ5 107 aa14.67□□□□□ -0.06
COL7A1-208ENST00000470076 DCTN6O00399 190 aa14.67□□□□□ -0.06
COL7A1-208ENST00000470076 DIRAS1O95057 198 aa14.67□□□□□ -0.06
COL7A1-208ENST00000470076 FSTL3O95633 263 aa14.67□□□□□ -0.06
COL7A1-208ENST00000470076 PPP1R3DO95685 299 aa14.67□□□□□ -0.06
COL7A1-208ENST00000470076 GPANK1O95872 356 aa14.67□□□□□ -0.06
COL7A1-208ENST00000470076 HKR1P10072 659 aa14.67□□□□□ -0.06
COL7A1-208ENST00000470076 SELEP16581 610 aa14.67□□□□□ -0.06
COL7A1-208ENST00000470076 PRTN3P24158 256 aa14.67□□□□□ -0.06
COL7A1-208ENST00000470076 SMIM11AP58511 58 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms