RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 CMTM6Q9NX76 183 aa5.44□□□□□ -1.54
PTCD3-208ENST00000469585 MRPL39Q9NYK5 338 aaKnown RBP5.44□□□□□ -1.54
PTCD3-208ENST00000469585 CISD1Q9NZ45 108 aaKnown RBP5.44□□□□□ -1.54
PTCD3-208ENST00000469585 OR6C3Q9NZP0 311 aa5.44□□□□□ -1.54
PTCD3-208ENST00000469585 ABCD2Q9UBJ2 740 aa5.44□□□□□ -1.54
PTCD3-208ENST00000469585 FBXL3Q9UKT7 428 aa5.44□□□□□ -1.54
PTCD3-208ENST00000469585 MGAT4BQ9UQ53 548 aa5.44□□□□□ -1.54
PTCD3-208ENST00000469585 POFUT2Q9Y2G5 429 aa5.44□□□□□ -1.54
PTCD3-208ENST00000469585 AMDHD2Q9Y303 409 aa5.44□□□□□ -1.54
PTCD3-208ENST00000469585 V9GYQ6 96 aa5.44□□□□□ -1.54
PTCD3-208ENST00000469585 GCN1Q92616 2671 aaKnown RBP5.44□□□□□ -1.54
PTCD3-208ENST00000469585 HIVEP3Q5T1R4 2406 aa5.44□□□□□ -1.54
PTCD3-208ENST00000469585 DOPEY2Q9Y3R5 2298 aa5.44□□□□□ -1.54
PTCD3-208ENST00000469585 BAHCC1Q9P281 2608 aa5.44□□□□□ -1.54
PTCD3-208ENST00000469585 UBR5O95071 2799 aaPredicted RBP5.43□□□□□ -1.54
PTCD3-208ENST00000469585 A6NIZ1 184 aa5.43□□□□□ -1.54
PTCD3-208ENST00000469585 EFCAB9A8MZ26 197 aa5.43□□□□□ -1.54
PTCD3-208ENST00000469585 C11orf98E9PRG8 122 aa5.43□□□□□ -1.54
PTCD3-208ENST00000469585 ARPC2O15144 300 aa5.43□□□□□ -1.54
PTCD3-208ENST00000469585 PTP4A3O75365 173 aa5.43□□□□□ -1.54
PTCD3-208ENST00000469585 E2F6O75461 281 aa5.43□□□□□ -1.54
PTCD3-208ENST00000469585 GADD45GO95257 159 aa5.43□□□□□ -1.54
PTCD3-208ENST00000469585 IGF2P01344 180 aa5.43□□□□□ -1.54
PTCD3-208ENST00000469585 IGHG1P01857 330 aa5.43□□□□□ -1.54
PTCD3-208ENST00000469585 ERCC1P07992 297 aaPredicted RBP5.43□□□□□ -1.54
PTCD3-208ENST00000469585 IFI30P13284 250 aa5.43□□□□□ -1.54
PTCD3-208ENST00000469585 NCK1P16333 377 aa5.43□□□□□ -1.54
PTCD3-208ENST00000469585 CDH2P19022 906 aaPredicted RBP5.43□□□□□ -1.54
PTCD3-208ENST00000469585 SHC1P29353 583 aa5.43□□□□□ -1.54
PTCD3-208ENST00000469585 GRPRP30550 384 aa5.43□□□□□ -1.54
PTCD3-208ENST00000469585 CSNK1A1P48729 337 aa5.43□□□□□ -1.54
PTCD3-208ENST00000469585 SLC9A3P48764 834 aa5.43□□□□□ -1.54
PTCD3-208ENST00000469585 RAP1BP61224 184 aa5.43□□□□□ -1.54
PTCD3-208ENST00000469585 RAP1AP62834 184 aa5.43□□□□□ -1.54
PTCD3-208ENST00000469585 KEAP1Q14145 624 aa5.43□□□□□ -1.54
PTCD3-208ENST00000469585 FLOT2Q14254 428 aa5.43□□□□□ -1.54
PTCD3-208ENST00000469585 GK3PQ14409 553 aa5.43□□□□□ -1.54
PTCD3-208ENST00000469585 SLC17A1Q14916 467 aa5.43□□□□□ -1.54
PTCD3-208ENST00000469585 PPA1Q15181 289 aa5.43□□□□□ -1.54
PTCD3-208ENST00000469585 MED22Q15528 200 aa5.43□□□□□ -1.54
PTCD3-208ENST00000469585 MAPK11Q15759 364 aa5.43□□□□□ -1.54
PTCD3-208ENST00000469585 GLIPR1L2Q4G1C9 344 aa5.43□□□□□ -1.54
PTCD3-208ENST00000469585 TIMM23BQ5SRD1 257 aa5.43□□□□□ -1.54
PTCD3-208ENST00000469585 PLXDC2Q6UX71 529 aa5.43□□□□□ -1.54
PTCD3-208ENST00000469585 UNQ6126/PRO20091Q6UXV3 157 aa5.43□□□□□ -1.54
PTCD3-208ENST00000469585 C9orf47Q6ZRZ4 202 aa5.43□□□□□ -1.54
PTCD3-208ENST00000469585 DPPA2Q7Z7J5 298 aa5.43□□□□□ -1.54
PTCD3-208ENST00000469585 OFCC1Q8IZS5 231 aa5.43□□□□□ -1.54
PTCD3-208ENST00000469585 TMEM99Q8N816 258 aa5.43□□□□□ -1.54
PTCD3-208ENST00000469585 SCCPDHQ8NBX0 429 aa5.43□□□□□ -1.54
PTCD3-208ENST00000469585 OR52L1Q8NGH7 329 aa5.43□□□□□ -1.54
PTCD3-208ENST00000469585 ACOT11Q8WXI4 607 aaPredicted RBP5.43□□□□□ -1.54
PTCD3-208ENST00000469585 BPIFA2Q96DR5 249 aa5.43□□□□□ -1.54
PTCD3-208ENST00000469585 ASB9Q96DX5 294 aa5.43□□□□□ -1.54
PTCD3-208ENST00000469585 PIK3IP1Q96FE7 263 aa5.43□□□□□ -1.54
PTCD3-208ENST00000469585 ZNF300Q96RE9 604 aaPredicted RBP5.43□□□□□ -1.54
PTCD3-208ENST00000469585 C1QTNF5Q9BXJ0 243 aa5.43□□□□□ -1.54
PTCD3-208ENST00000469585 ULBP2Q9BZM5 246 aa5.43□□□□□ -1.54
PTCD3-208ENST00000469585 LRMDAQ9H2I8 198 aa5.43□□□□□ -1.54
PTCD3-208ENST00000469585 REEP1Q9H902 201 aa5.43□□□□□ -1.54
PTCD3-208ENST00000469585 ZNF556Q9HAH1 456 aa5.43□□□□□ -1.54
PTCD3-208ENST00000469585 INIPQ9NRY2 104 aa5.43□□□□□ -1.54
PTCD3-208ENST00000469585 DCAF13Q9NV06 445 aaKnown RBP5.43□□□□□ -1.54
PTCD3-208ENST00000469585 ACTR3BQ9P1U1 418 aa5.43□□□□□ -1.54
PTCD3-208ENST00000469585 FLVCR1Q9Y5Y0 555 aa5.43□□□□□ -1.54
PTCD3-208ENST00000469585 ENPP4Q9Y6X5 453 aa5.43□□□□□ -1.54
PTCD3-208ENST00000469585 SPTBN1Q01082 2364 aaKnown RBP5.43□□□□□ -1.54
PTCD3-208ENST00000469585 ENO4A6NNW6 628 aa5.42□□□□□ -1.54
PTCD3-208ENST00000469585 hCG_2039718K7EN88 272 aa5.42□□□□□ -1.54
PTCD3-208ENST00000469585 CLOCKO15516 846 aa5.42□□□□□ -1.54
PTCD3-208ENST00000469585 EFNA2O43921 213 aa5.42□□□□□ -1.54
PTCD3-208ENST00000469585 MGRN1O60291 552 aa5.42□□□□□ -1.54
PTCD3-208ENST00000469585 OR10H3O60404 316 aa5.42□□□□□ -1.54
PTCD3-208ENST00000469585 RAD51DO75771 328 aa5.42□□□□□ -1.54
PTCD3-208ENST00000469585 LYZL6O75951 148 aa5.42□□□□□ -1.54
PTCD3-208ENST00000469585 OR7A10O76100 309 aa5.42□□□□□ -1.54
PTCD3-208ENST00000469585 RAB36O95755 333 aa5.42□□□□□ -1.54
PTCD3-208ENST00000469585 PTHP01270 115 aa5.42□□□□□ -1.54
PTCD3-208ENST00000469585 IGHV3-9P01782 118 aa5.42□□□□□ -1.54
PTCD3-208ENST00000469585 C1QCP02747 245 aa5.42□□□□□ -1.54
PTCD3-208ENST00000469585 FUT1P19526 365 aa5.42□□□□□ -1.54
PTCD3-208ENST00000469585 HTR2AP28223 471 aa5.42□□□□□ -1.54
PTCD3-208ENST00000469585 ARL3P36405 182 aa5.42□□□□□ -1.54
PTCD3-208ENST00000469585 YAP1P46937 504 aaKnown RBP5.42□□□□□ -1.54
PTCD3-208ENST00000469585 GZMMP51124 257 aa5.42□□□□□ -1.54
PTCD3-208ENST00000469585 CD47Q08722 323 aa5.42□□□□□ -1.54
PTCD3-208ENST00000469585 TRAP1Q12931 704 aaKnown RBP5.42□□□□□ -1.54
PTCD3-208ENST00000469585 CARD17Q5XLA6 110 aa5.42□□□□□ -1.54
PTCD3-208ENST00000469585 RPL13AP3Q6NVV1 102 aa5.42□□□□□ -1.54
PTCD3-208ENST00000469585 MZT2BQ6NZ67 158 aa5.42□□□□□ -1.54
PTCD3-208ENST00000469585 DNM1P34Q6PK57 102 aa5.42□□□□□ -1.54
PTCD3-208ENST00000469585 CREB3L2Q70SY1 520 aa5.42□□□□□ -1.54
PTCD3-208ENST00000469585 SLC35D2Q76EJ3 337 aa5.42□□□□□ -1.54
PTCD3-208ENST00000469585 SHFQ7M4L6 423 aa5.42□□□□□ -1.54
PTCD3-208ENST00000469585 NUFIP2Q7Z417 695 aaKnown RBP5.42□□□□□ -1.54
PTCD3-208ENST00000469585 VTCN1Q7Z7D3 282 aa5.42□□□□□ -1.54
PTCD3-208ENST00000469585 SPATA24Q86W54 205 aa5.42□□□□□ -1.54
PTCD3-208ENST00000469585 ZDHHC21Q8IVQ6 265 aa5.42□□□□□ -1.54
PTCD3-208ENST00000469585 RBM15BQ8NDT2 890 aaKnown RBP5.42□□□□□ -1.54
PTCD3-208ENST00000469585 GPR32P1Q8NGA4 272 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms