RNA–Protein interactions for RNA: ENST00000468600.1

SSB-208, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-208ENST00000468600 PDIK1LQ8N165 341 aa0.54□□□□□ -2.32
SSB-208ENST00000468600 CCDC110Q8TBZ0 833 aa0.54□□□□□ -2.32
SSB-208ENST00000468600 CXorf40AQ8TE69 158 aa0.54□□□□□ -2.32
SSB-208ENST00000468600 RLN3Q8WXF3 142 aa0.54□□□□□ -2.32
SSB-208ENST00000468600 PSKH2Q96QS6 385 aa0.54□□□□□ -2.32
SSB-208ENST00000468600 CWH43Q9H720 699 aa0.54□□□□□ -2.32
SSB-208ENST00000468600 DBNDD1Q9H9R9 158 aa0.54□□□□□ -2.32
SSB-208ENST00000468600 SLC7A8Q9UHI5 535 aa0.54□□□□□ -2.32
SSB-208ENST00000468600 ING4Q9UNL4 249 aa0.54□□□□□ -2.32
SSB-208ENST00000468600 RPRD2Q5VT52 1461 aaKnown RBP0.54□□□□□ -2.32
SSB-208ENST00000468600 GABRR3A8MPY1 467 aa0.53□□□□□ -2.32
SSB-208ENST00000468600 C15orf65H3BRN8 121 aa0.53□□□□□ -2.32
SSB-208ENST00000468600 GOSR2O14653 212 aa0.53□□□□□ -2.32
SSB-208ENST00000468600 ZNF73O43830 326 aaPredicted RBP0.53□□□□□ -2.32
SSB-208ENST00000468600 CCDC22O60826 627 aa0.53□□□□□ -2.32
SSB-208ENST00000468600 HLA-DMAP28067 261 aa0.53□□□□□ -2.32
SSB-208ENST00000468600 ACOT2P49753 483 aa0.53□□□□□ -2.32
SSB-208ENST00000468600 SSR4P51571 173 aa0.53□□□□□ -2.32
SSB-208ENST00000468600 RPL23P62829 140 aaKnown RBP0.53□□□□□ -2.32
SSB-208ENST00000468600 PPIDQ08752 370 aaKnown RBP0.53□□□□□ -2.32
SSB-208ENST00000468600 SIGLEC14Q08ET2 396 aa0.53□□□□□ -2.32
SSB-208ENST00000468600 CDR2LQ86X02 465 aaPredicted RBP0.53□□□□□ -2.32
SSB-208ENST00000468600 MUC7Q8TAX7 377 aa0.53□□□□□ -2.32
SSB-208ENST00000468600 SCFD1Q8WVM8 642 aa0.53□□□□□ -2.32
SSB-208ENST00000468600 CPNE4Q96A23 557 aaPredicted RBP0.53□□□□□ -2.32
SSB-208ENST00000468600 GPR82Q96P67 336 aa0.53□□□□□ -2.32
SSB-208ENST00000468600 THUMPD2Q9BTF0 503 aaKnown RBP0.53□□□□□ -2.32
SSB-208ENST00000468600 TPPP3Q9BW30 176 aa0.53□□□□□ -2.32
SSB-208ENST00000468600 ABCG5Q9H222 651 aa0.53□□□□□ -2.32
SSB-208ENST00000468600 ZNF302Q9NR11 478 aa0.53□□□□□ -2.32
SSB-208ENST00000468600 POLE3Q9NRF9 147 aa0.53□□□□□ -2.32
SSB-208ENST00000468600 PIGLQ9Y2B2 252 aa0.53□□□□□ -2.32
SSB-208ENST00000468600 TSPOAP1O95153 1857 aa0.52□□□□□ -2.33
SSB-208ENST00000468600 A0A1W2PPV9 198 aa0.52□□□□□ -2.33
SSB-208ENST00000468600 L7N2F9 121 aa0.52□□□□□ -2.33
SSB-208ENST00000468600 EIF4E2O60573 245 aaKnown RBP0.52□□□□□ -2.33
SSB-208ENST00000468600 RPA2P15927 270 aa0.52□□□□□ -2.33
SSB-208ENST00000468600 GPX4P36969 197 aaPredicted RBP0.52□□□□□ -2.33
SSB-208ENST00000468600 RND2P52198 227 aa0.52□□□□□ -2.33
SSB-208ENST00000468600 ACTG2P63267 376 aa0.52□□□□□ -2.33
SSB-208ENST00000468600 TPBGQ13641 420 aa0.52□□□□□ -2.33
SSB-208ENST00000468600 DMC1Q14565 340 aa0.52□□□□□ -2.33
SSB-208ENST00000468600 Q6ZPB1 254 aaPredicted RBP0.52□□□□□ -2.33
SSB-208ENST00000468600 TMEM25Q86YD3 366 aa0.52□□□□□ -2.33
SSB-208ENST00000468600 PSTKQ8IV42 348 aaKnown RBP0.52□□□□□ -2.33
SSB-208ENST00000468600 NKAIN4Q8IVV8 208 aa0.52□□□□□ -2.33
SSB-208ENST00000468600 OR10AD1Q8NGE0 317 aa0.52□□□□□ -2.33
SSB-208ENST00000468600 OR10G6Q8NH81 332 aa0.52□□□□□ -2.33
SSB-208ENST00000468600 IGF2BP2-AS1Q96M15 143 aa0.52□□□□□ -2.33
SSB-208ENST00000468600 TRIM62Q9BVG3 475 aa0.52□□□□□ -2.33
SSB-208ENST00000468600 HMGXB4Q9UGU5 601 aa0.52□□□□□ -2.33
SSB-208ENST00000468600 ADAM28Q9UKQ2 775 aa0.52□□□□□ -2.33
SSB-208ENST00000468600 NPTNQ9Y639 398 aa0.52□□□□□ -2.33
SSB-208ENST00000468600 TRAV26-1A0A087WT03 109 aa0.51□□□□□ -2.33
SSB-208ENST00000468600 IGKV1-8A0A0C4DH67 115 aa0.51□□□□□ -2.33
SSB-208ENST00000468600 ZNF208O43345 1280 aa0.51□□□□□ -2.33
SSB-208ENST00000468600 ATP8B3O60423 1300 aa0.51□□□□□ -2.33
SSB-208ENST00000468600 PALMO75781 387 aa0.51□□□□□ -2.33
SSB-208ENST00000468600 FGGP02679 453 aa0.51□□□□□ -2.33
SSB-208ENST00000468600 UGT2B4P06133 528 aa0.51□□□□□ -2.33
SSB-208ENST00000468600 IQCF3P0C7M6 154 aa0.51□□□□□ -2.33
SSB-208ENST00000468600 ERGP11308 486 aa0.51□□□□□ -2.33
SSB-208ENST00000468600 NCK1P16333 377 aa0.51□□□□□ -2.33
SSB-208ENST00000468600 CHMLP26374 656 aa0.51□□□□□ -2.33
SSB-208ENST00000468600 SSR1P43307 286 aaKnown RBP0.51□□□□□ -2.33
SSB-208ENST00000468600 PRMT2P55345 433 aa0.51□□□□□ -2.33
SSB-208ENST00000468600 ELF3P78545 371 aaPredicted RBP0.51□□□□□ -2.33
SSB-208ENST00000468600 SLC25A11Q02978 314 aaKnown RBP0.51□□□□□ -2.33
SSB-208ENST00000468600 ZNF141Q15928 474 aa0.51□□□□□ -2.33
SSB-208ENST00000468600 DAZ4Q86SG3 579 aaKnown RBP0.51□□□□□ -2.33
SSB-208ENST00000468600 ERO1BQ86YB8 467 aa0.51□□□□□ -2.33
SSB-208ENST00000468600 C11orf72Q8NBR9 251 aa0.51□□□□□ -2.33
SSB-208ENST00000468600 ZNF502Q8TBZ5 544 aa0.51□□□□□ -2.33
SSB-208ENST00000468600 IFT74Q96LB3 600 aa0.51□□□□□ -2.33
SSB-208ENST00000468600 RPRD1AQ96P16 312 aaPredicted RBP0.51□□□□□ -2.33
SSB-208ENST00000468600 DAZ1Q9NQZ3 744 aaKnown RBP0.51□□□□□ -2.33
SSB-208ENST00000468600 ETNK2Q9NVF9 386 aa0.51□□□□□ -2.33
SSB-208ENST00000468600 SDAD1Q9NVU7 687 aaKnown RBP eCLIP0.51□□□□□ -2.33
SSB-208ENST00000468600 TAS2R3Q9NYW6 316 aa0.51□□□□□ -2.33
SSB-208ENST00000468600 PDP1Q9P0J1 537 aaPredicted RBP0.51□□□□□ -2.33
SSB-208ENST00000468600 PEX16Q9Y5Y5 336 aa0.51□□□□□ -2.33
SSB-208ENST00000468600 BRD4O60885 1362 aaPredicted RBP0.5□□□□□ -2.33
SSB-208ENST00000468600 CNTNAP1P78357 1384 aa0.5□□□□□ -2.33
SSB-208ENST00000468600 NDUFC2-KCTD14E9PQ53 114 aa0.5□□□□□ -2.33
SSB-208ENST00000468600 CRYGBP07316 175 aa0.5□□□□□ -2.33
SSB-208ENST00000468600 CD37P11049 281 aa0.5□□□□□ -2.33
SSB-208ENST00000468600 DBTP11182 482 aaKnown RBP0.5□□□□□ -2.33
SSB-208ENST00000468600 ZNF83P51522 516 aa0.5□□□□□ -2.33
SSB-208ENST00000468600 HTD2P86397 168 aa0.5□□□□□ -2.33
SSB-208ENST00000468600 CHRNA6Q15825 494 aa0.5□□□□□ -2.33
SSB-208ENST00000468600 NADK2Q4G0N4 442 aa0.5□□□□□ -2.33
SSB-208ENST00000468600 CCDC73Q6ZRK6 1079 aa0.5□□□□□ -2.33
SSB-208ENST00000468600 NPWQ8N729 165 aa0.5□□□□□ -2.33
SSB-208ENST00000468600 OR2Z1Q8NG97 314 aa0.5□□□□□ -2.33
SSB-208ENST00000468600 OR4F6Q8NGB9 312 aa0.5□□□□□ -2.33
SSB-208ENST00000468600 OR1J4Q8NGS1 313 aa0.5□□□□□ -2.33
SSB-208ENST00000468600 ACTL9Q8TC94 416 aa0.5□□□□□ -2.33
SSB-208ENST00000468600 FMO2Q99518 471 aa0.5□□□□□ -2.33
SSB-208ENST00000468600 MARVELD1Q9BSK0 173 aa0.5□□□□□ -2.33
SSB-208ENST00000468600 GOLT1BQ9Y3E0 138 aa0.5□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms