RNA–Protein interactions for RNA: ENST00000467681.5

SSBP1-206, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 630 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-206ENST00000467681 SYNPRQ8TBG9 265 aa11.69□□□□□ -0.54
SSBP1-206ENST00000467681 TMEM163Q8TC26 289 aa11.69□□□□□ -0.54
SSBP1-206ENST00000467681 ZMYND19Q96E35 227 aaPredicted RBP11.69□□□□□ -0.54
SSBP1-206ENST00000467681 INTS14Q96SY0 518 aa11.69□□□□□ -0.54
SSBP1-206ENST00000467681 TEAD3Q99594 435 aa11.69□□□□□ -0.54
SSBP1-206ENST00000467681 SYT3Q9BQG1 590 aa11.69□□□□□ -0.54
SSBP1-206ENST00000467681 H2AFY2Q9P0M6 372 aaPredicted RBP11.69□□□□□ -0.54
SSBP1-206ENST00000467681 FZR1Q9UM11 496 aa11.69□□□□□ -0.54
SSBP1-206ENST00000467681 ORC6Q9Y5N6 252 aa11.69□□□□□ -0.54
SSBP1-206ENST00000467681 ITPR3Q14573 2671 aa11.68□□□□□ -0.54
SSBP1-206ENST00000467681 IGLV3-9A0A075B6K5 115 aa11.68□□□□□ -0.54
SSBP1-206ENST00000467681 ERICH4A6NGS2 130 aa11.68□□□□□ -0.54
SSBP1-206ENST00000467681 CLPTM1O96005 669 aa11.68□□□□□ -0.54
SSBP1-206ENST00000467681 IGHV4-39P01824 125 aa11.68□□□□□ -0.54
SSBP1-206ENST00000467681 ANPEPP15144 967 aa11.68□□□□□ -0.54
SSBP1-206ENST00000467681 EFNA4P52798 201 aa11.68□□□□□ -0.54
SSBP1-206ENST00000467681 APOFQ13790 326 aa11.68□□□□□ -0.54
SSBP1-206ENST00000467681 MOGQ16653 247 aa11.68□□□□□ -0.54
SSBP1-206ENST00000467681 ZIK1Q3SY52 487 aaPredicted RBP11.68□□□□□ -0.54
SSBP1-206ENST00000467681 Q5PR19 223 aa11.68□□□□□ -0.54
SSBP1-206ENST00000467681 COLCA1Q6ZS62 124 aa11.68□□□□□ -0.54
SSBP1-206ENST00000467681 RFPL4BQ6ZWI9 263 aa11.68□□□□□ -0.54
SSBP1-206ENST00000467681 MEPCEQ7L2J0 689 aaKnown RBP11.68□□□□□ -0.54
SSBP1-206ENST00000467681 SHFQ7M4L6 423 aa11.68□□□□□ -0.54
SSBP1-206ENST00000467681 DPY19L4Q7Z388 723 aa11.68□□□□□ -0.54
SSBP1-206ENST00000467681 DCXRQ7Z4W1 244 aa11.68□□□□□ -0.54
SSBP1-206ENST00000467681 TGIF2LYQ8IUE0 185 aa11.68□□□□□ -0.54
SSBP1-206ENST00000467681 ERI1Q8IV48 349 aaKnown RBP11.68□□□□□ -0.54
SSBP1-206ENST00000467681 ZNF454Q8N9F8 522 aa11.68□□□□□ -0.54
SSBP1-206ENST00000467681 WFDC11Q8NEX6 87 aa11.68□□□□□ -0.54
SSBP1-206ENST00000467681 SLC25A40Q8TBP6 338 aa11.68□□□□□ -0.54
SSBP1-206ENST00000467681 KLF14Q8TD94 323 aaPredicted RBP11.68□□□□□ -0.54
SSBP1-206ENST00000467681 ST7LQ8TDW4 575 aa11.68□□□□□ -0.54
SSBP1-206ENST00000467681 TRUB1Q8WWH5 349 aaKnown RBP11.68□□□□□ -0.54
SSBP1-206ENST00000467681 EME1Q96AY2 570 aa11.68□□□□□ -0.54
SSBP1-206ENST00000467681 HRASLS5Q96KN8 279 aa11.68□□□□□ -0.54
SSBP1-206ENST00000467681 IL4I1Q96RQ9 567 aa11.68□□□□□ -0.54
SSBP1-206ENST00000467681 ATF6BQ99941 703 aa11.68□□□□□ -0.54
SSBP1-206ENST00000467681 BARX1Q9HBU1 254 aaPredicted RBP11.68□□□□□ -0.54
SSBP1-206ENST00000467681 STARD10Q9Y365 291 aa11.68□□□□□ -0.54
SSBP1-206ENST00000467681 CSMD1Q96PZ7 3565 aa11.67□□□□□ -0.54
SSBP1-206ENST00000467681 CCDC182A6NF36 153 aa11.67□□□□□ -0.54
SSBP1-206ENST00000467681 F5H5K5 113 aa11.67□□□□□ -0.54
SSBP1-206ENST00000467681 H3BSA7 217 aa11.67□□□□□ -0.54
SSBP1-206ENST00000467681 J3QW42 95 aa11.67□□□□□ -0.54
SSBP1-206ENST00000467681 F12P00748 615 aaPredicted RBP11.67□□□□□ -0.54
SSBP1-206ENST00000467681 IGHV3-13P01766 116 aa11.67□□□□□ -0.54
SSBP1-206ENST00000467681 ADRA2AP08913 450 aa11.67□□□□□ -0.54
SSBP1-206ENST00000467681 ACSM4P0C7M7 580 aa11.67□□□□□ -0.54
SSBP1-206ENST00000467681 RGS6P49758 472 aa11.67□□□□□ -0.54
SSBP1-206ENST00000467681 PPOXP50336 477 aa11.67□□□□□ -0.54
SSBP1-206ENST00000467681 KLF3P57682 345 aaPredicted RBP11.67□□□□□ -0.54
SSBP1-206ENST00000467681 RPS7P62081 194 aaKnown RBP11.67□□□□□ -0.54
SSBP1-206ENST00000467681 RCN1Q15293 331 aa11.67□□□□□ -0.54
SSBP1-206ENST00000467681 NXNL2Q5VZ03 156 aa11.67□□□□□ -0.54
SSBP1-206ENST00000467681 MBNL2Q5VZF2 373 aaKnown RBP11.67□□□□□ -0.54
SSBP1-206ENST00000467681 RHOUQ7L0Q8 258 aa11.67□□□□□ -0.54
SSBP1-206ENST00000467681 BCDIN3DQ7Z5W3 292 aaKnown RBP11.67□□□□□ -0.54
SSBP1-206ENST00000467681 OR8J1Q8NGP2 316 aa11.67□□□□□ -0.54
SSBP1-206ENST00000467681 OR6N2Q8NGY6 317 aa11.67□□□□□ -0.54
SSBP1-206ENST00000467681 APOBEC3DQ96AK3 386 aaPredicted RBP11.67□□□□□ -0.54
SSBP1-206ENST00000467681 SLAMF6Q96DU3 332 aa11.67□□□□□ -0.54
SSBP1-206ENST00000467681 COG8Q96MW5 612 aa11.67□□□□□ -0.54
SSBP1-206ENST00000467681 VRK1Q99986 396 aaPredicted RBP11.67□□□□□ -0.54
SSBP1-206ENST00000467681 ABHD6Q9BV23 337 aa11.67□□□□□ -0.54
SSBP1-206ENST00000467681 OR2J1Q9GZK6 312 aa11.67□□□□□ -0.54
SSBP1-206ENST00000467681 RAB1BQ9H0U4 201 aa11.67□□□□□ -0.54
SSBP1-206ENST00000467681 MS4A5Q9H3V2 200 aa11.67□□□□□ -0.54
SSBP1-206ENST00000467681 CENPMQ9NSP4 180 aa11.67□□□□□ -0.54
SSBP1-206ENST00000467681 DDX28Q9NUL7 540 aaKnown RBP11.67□□□□□ -0.54
SSBP1-206ENST00000467681 SLCO1C1Q9NYB5 712 aa11.67□□□□□ -0.54
SSBP1-206ENST00000467681 TAAR3PQ9P1P4 343 aa11.67□□□□□ -0.54
SSBP1-206ENST00000467681 MYEF2Q9P2K5 600 aaKnown RBP11.67□□□□□ -0.54
SSBP1-206ENST00000467681 GPR160Q9UJ42 338 aa11.67□□□□□ -0.54
SSBP1-206ENST00000467681 M0R129 80 aa11.66□□□□□ -0.54
SSBP1-206ENST00000467681 M0R233 179 aa11.66□□□□□ -0.54
SSBP1-206ENST00000467681 SELENOFO60613 162 aa11.66□□□□□ -0.54
SSBP1-206ENST00000467681 GCH1P30793 250 aa11.66□□□□□ -0.54
SSBP1-206ENST00000467681 OTX1P32242 354 aaPredicted RBP11.66□□□□□ -0.54
SSBP1-206ENST00000467681 MPV17P39210 176 aa11.66□□□□□ -0.54
SSBP1-206ENST00000467681 NUDT6P53370 316 aa11.66□□□□□ -0.54
SSBP1-206ENST00000467681 TPTEP56180 551 aa11.66□□□□□ -0.54
SSBP1-206ENST00000467681 ELF3P78545 371 aaPredicted RBP11.66□□□□□ -0.54
SSBP1-206ENST00000467681 EIF2B1Q14232 305 aaKnown RBP11.66□□□□□ -0.54
SSBP1-206ENST00000467681 TAF13Q15543 124 aa11.66□□□□□ -0.54
SSBP1-206ENST00000467681 SPATA46Q5T0L3 261 aa11.66□□□□□ -0.54
SSBP1-206ENST00000467681 SLC16A9Q7RTY1 509 aa11.66□□□□□ -0.54
SSBP1-206ENST00000467681 NAA40Q86UY6 237 aa11.66□□□□□ -0.54
SSBP1-206ENST00000467681 ZCCHC24Q8N2G6 241 aaKnown RBP11.66□□□□□ -0.54
SSBP1-206ENST00000467681 OR5L1Q8NGL2 311 aa11.66□□□□□ -0.54
SSBP1-206ENST00000467681 OTOSQ8NHW6 89 aa11.66□□□□□ -0.54
SSBP1-206ENST00000467681 NEU4Q8WWR8 484 aaPredicted RBP11.66□□□□□ -0.54
SSBP1-206ENST00000467681 UBE2FQ969M7 185 aa11.66□□□□□ -0.54
SSBP1-206ENST00000467681 SPTSSAQ969W0 71 aa11.66□□□□□ -0.54
SSBP1-206ENST00000467681 HAVCR1Q96D42 359 aa11.66□□□□□ -0.54
SSBP1-206ENST00000467681 CMBLQ96DG6 245 aa11.66□□□□□ -0.54
SSBP1-206ENST00000467681 MBOAT4Q96T53 435 aa11.66□□□□□ -0.54
SSBP1-206ENST00000467681 C1QTNF5Q9BXJ0 243 aa11.66□□□□□ -0.54
SSBP1-206ENST00000467681 YIPF3Q9GZM5 350 aa11.66□□□□□ -0.54
SSBP1-206ENST00000467681 TOR3AQ9H497 397 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms