RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 METRNLQ641Q3 311 aa7.94□□□□□ -1.14
HPS4-209ENST00000466781 LAIR1Q6GTX8 287 aa7.94□□□□□ -1.14
HPS4-209ENST00000466781 MOB3BQ86TA1 216 aa7.94□□□□□ -1.14
HPS4-209ENST00000466781 LSRQ86X29 649 aaPredicted RBP7.94□□□□□ -1.14
HPS4-209ENST00000466781 SARGQ9BW04 601 aa7.94□□□□□ -1.14
HPS4-209ENST00000466781 ZNF346Q9UL40 294 aaKnown RBP7.94□□□□□ -1.14
HPS4-209ENST00000466781 EMCNQ9ULC0 261 aa7.94□□□□□ -1.14
HPS4-209ENST00000466781 RNF150Q9ULK6 438 aa7.94□□□□□ -1.14
HPS4-209ENST00000466781 R4GN57 208 aa7.94□□□□□ -1.14
HPS4-209ENST00000466781 COL4A5P29400 1685 aa7.93□□□□□ -1.14
HPS4-209ENST00000466781 ZNF785A8K8V0 405 aa7.93□□□□□ -1.14
HPS4-209ENST00000466781 NUDT19A8MXV4 375 aa7.93□□□□□ -1.14
HPS4-209ENST00000466781 UBL3O95164 117 aa7.93□□□□□ -1.14
HPS4-209ENST00000466781 CLN3Q13286 438 aa7.93□□□□□ -1.14
HPS4-209ENST00000466781 ALKAL2Q6UX46 152 aa7.93□□□□□ -1.14
HPS4-209ENST00000466781 Q6ZNB5 142 aa7.93□□□□□ -1.14
HPS4-209ENST00000466781 Q6ZPB1 254 aaPredicted RBP7.93□□□□□ -1.14
HPS4-209ENST00000466781 LILRA3Q8N6C8 439 aaPredicted RBP7.93□□□□□ -1.14
HPS4-209ENST00000466781 OR51E1Q8TCB6 317 aa7.93□□□□□ -1.14
HPS4-209ENST00000466781 YIPF5Q969M3 257 aa7.93□□□□□ -1.14
HPS4-209ENST00000466781 OXGR1Q96P68 337 aa7.93□□□□□ -1.14
HPS4-209ENST00000466781 SLC23A1Q9UHI7 598 aa7.93□□□□□ -1.14
HPS4-209ENST00000466781 GAB2Q9UQC2 676 aa7.93□□□□□ -1.14
HPS4-209ENST00000466781 NTNG1Q9Y2I2 539 aa7.93□□□□□ -1.14
HPS4-209ENST00000466781 NRASP01111 189 aa7.93□□□□□ -1.14
HPS4-209ENST00000466781 CHRM2P08172 466 aa7.93□□□□□ -1.14
HPS4-209ENST00000466781 HNF1AP20823 631 aa7.93□□□□□ -1.14
HPS4-209ENST00000466781 PCSK6P29122 969 aa7.93□□□□□ -1.14
HPS4-209ENST00000466781 FCER1GP30273 86 aa7.93□□□□□ -1.14
HPS4-209ENST00000466781 PFN3P60673 137 aa7.93□□□□□ -1.14
HPS4-209ENST00000466781 TPBGQ13641 420 aa7.93□□□□□ -1.14
HPS4-209ENST00000466781 CMPK2Q5EBM0 449 aa7.93□□□□□ -1.14
HPS4-209ENST00000466781 OR10K2Q6IF99 312 aa7.93□□□□□ -1.14
HPS4-209ENST00000466781 TMEM182Q6ZP80 229 aaPredicted RBP7.93□□□□□ -1.14
HPS4-209ENST00000466781 SPRED1Q7Z699 444 aa7.93□□□□□ -1.14
HPS4-209ENST00000466781 TMEM200AQ86VY9 491 aa7.93□□□□□ -1.14
HPS4-209ENST00000466781 PHYHIPQ92561 330 aa7.93□□□□□ -1.14
HPS4-209ENST00000466781 OPALINQ96PE5 141 aa7.93□□□□□ -1.14
HPS4-209ENST00000466781 TBC1D29Q9UFV1 150 aa7.93□□□□□ -1.14
HPS4-209ENST00000466781 A0A087WZY1 265 aa7.93□□□□□ -1.14
HPS4-209ENST00000466781 A0A1W2PNR3 127 aa7.93□□□□□ -1.14
HPS4-209ENST00000466781 A0A1W2PPC4 97 aa7.93□□□□□ -1.14
HPS4-209ENST00000466781 TERTO14746 1132 aaKnown RBP7.93□□□□□ -1.14
HPS4-209ENST00000466781 NDUFB3O43676 98 aa7.93□□□□□ -1.14
HPS4-209ENST00000466781 COX7A2P2O60397 106 aa7.93□□□□□ -1.14
HPS4-209ENST00000466781 ICOSLGO75144 302 aa7.93□□□□□ -1.14
HPS4-209ENST00000466781 CALCBP10092 127 aa7.93□□□□□ -1.14
HPS4-209ENST00000466781 NID1P14543 1247 aa7.93□□□□□ -1.14
HPS4-209ENST00000466781 HTR4Q13639 388 aa7.93□□□□□ -1.14
HPS4-209ENST00000466781 AFMIDQ63HM1 303 aa7.93□□□□□ -1.14
HPS4-209ENST00000466781 OR2T6Q8NHC8 308 aa7.93□□□□□ -1.14
HPS4-209ENST00000466781 ST8SIA4Q92187 359 aa7.93□□□□□ -1.14
HPS4-209ENST00000466781 MOB3AQ96BX8 217 aa7.93□□□□□ -1.14
HPS4-209ENST00000466781 TRMT61AQ96FX7 289 aaKnown RBP7.93□□□□□ -1.14
HPS4-209ENST00000466781 SCPEP1Q9HB40 452 aa7.93□□□□□ -1.14
HPS4-209ENST00000466781 DLL4Q9NR61 685 aa7.93□□□□□ -1.14
HPS4-209ENST00000466781 MTCH2Q9Y6C9 303 aa7.93□□□□□ -1.14
HPS4-209ENST00000466781 LRRC37AA6NMS7 1700 aa7.93□□□□□ -1.14
HPS4-209ENST00000466781 MN1Q10571 1320 aaPredicted RBP7.93□□□□□ -1.14
HPS4-209ENST00000466781 TMEM200CA6NKL6 621 aa7.93□□□□□ -1.14
HPS4-209ENST00000466781 KRBOX1C9JBD0 128 aa7.93□□□□□ -1.14
HPS4-209ENST00000466781 CYC1P08574 325 aa7.93□□□□□ -1.14
HPS4-209ENST00000466781 TRIM23P36406 574 aa7.93□□□□□ -1.14
HPS4-209ENST00000466781 SPCS2Q15005 226 aa7.93□□□□□ -1.14
HPS4-209ENST00000466781 ACOT6Q3I5F7 207 aaPredicted RBP7.93□□□□□ -1.14
HPS4-209ENST00000466781 TIGITQ495A1 244 aa7.93□□□□□ -1.14
HPS4-209ENST00000466781 EMC4Q5J8M3 183 aa7.93□□□□□ -1.14
HPS4-209ENST00000466781 SOHLH1Q5JUK2 328 aa7.93□□□□□ -1.14
HPS4-209ENST00000466781 OR2A2Q6IF42 318 aa7.93□□□□□ -1.14
HPS4-209ENST00000466781 HSD17B11Q8NBQ5 300 aa7.93□□□□□ -1.14
HPS4-209ENST00000466781 PXT1Q8NFP0 134 aa7.93□□□□□ -1.14
HPS4-209ENST00000466781 ITPKCQ96DU7 683 aa7.93□□□□□ -1.14
HPS4-209ENST00000466781 CHST8Q9H2A9 424 aa7.93□□□□□ -1.14
HPS4-209ENST00000466781 SLC5A6Q9Y289 635 aa7.93□□□□□ -1.14
HPS4-209ENST00000466781 V9GYS6 101 aa7.93□□□□□ -1.14
HPS4-209ENST00000466781 SCN9AQ15858 1988 aa7.93□□□□□ -1.14
HPS4-209ENST00000466781 AQP7P3A6NL99 342 aa7.92□□□□□ -1.14
HPS4-209ENST00000466781 I6L893 689 aaPredicted RBP7.92□□□□□ -1.14
HPS4-209ENST00000466781 M0R135 149 aa7.92□□□□□ -1.14
HPS4-209ENST00000466781 ADRA2CP18825 462 aa7.92□□□□□ -1.14
HPS4-209ENST00000466781 INSM1Q01101 510 aaPredicted RBP7.92□□□□□ -1.14
HPS4-209ENST00000466781 OR10K1Q8NGX5 313 aa7.92□□□□□ -1.14
HPS4-209ENST00000466781 ZNF799Q96GE5 643 aa7.92□□□□□ -1.14
HPS4-209ENST00000466781 RNF32Q9H0A6 362 aa7.92□□□□□ -1.14
HPS4-209ENST00000466781 TMEM38AQ9H6F2 299 aa7.92□□□□□ -1.14
HPS4-209ENST00000466781 TAF9BQ9HBM6 251 aa7.92□□□□□ -1.14
HPS4-209ENST00000466781 RNF24Q9Y225 148 aa7.92□□□□□ -1.14
HPS4-209ENST00000466781 B3GALT5Q9Y2C3 310 aa7.92□□□□□ -1.14
HPS4-209ENST00000466781 NRXN2Q9P2S2 1712 aa7.92□□□□□ -1.14
HPS4-209ENST00000466781 ST8SIA5O15466 376 aa7.92□□□□□ -1.14
HPS4-209ENST00000466781 TAPBPO15533 448 aa7.92□□□□□ -1.14
HPS4-209ENST00000466781 OR2J3O76001 311 aa7.92□□□□□ -1.14
HPS4-209ENST00000466781 B3GALT4O96024 378 aa7.92□□□□□ -1.14
HPS4-209ENST00000466781 DUSP5Q16690 384 aa7.92□□□□□ -1.14
HPS4-209ENST00000466781 HLA-BQ31612 363 aa7.92□□□□□ -1.14
HPS4-209ENST00000466781 FAM71E1Q6IPT2 247 aa7.92□□□□□ -1.14
HPS4-209ENST00000466781 LAX1Q8IWV1 398 aa7.92□□□□□ -1.14
HPS4-209ENST00000466781 ENTHD1Q8IYW4 607 aa7.92□□□□□ -1.14
HPS4-209ENST00000466781 C17orf78Q8N4C9 275 aa7.92□□□□□ -1.14
HPS4-209ENST00000466781 SEH1LQ96EE3 360 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms