RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 FXYD6P3P58550 94 aa16.12■□□□□ 0.17
COL9A3-206ENST00000466532 PSME3P61289 254 aa16.12■□□□□ 0.17
COL9A3-206ENST00000466532 ZNF154Q13106 437 aa16.12■□□□□ 0.17
COL9A3-206ENST00000466532 HLXQ14774 488 aaPredicted RBP16.12■□□□□ 0.17
COL9A3-206ENST00000466532 GLYATQ6IB77 296 aa16.12■□□□□ 0.17
COL9A3-206ENST00000466532 DPY19L2P2Q6ZN68 376 aa16.12■□□□□ 0.17
COL9A3-206ENST00000466532 OR5L1Q8NGL2 311 aa16.12■□□□□ 0.17
COL9A3-206ENST00000466532 DVL3Q92997 716 aaPredicted RBP16.12■□□□□ 0.17
COL9A3-206ENST00000466532 ZMYND19Q96E35 227 aaPredicted RBP16.12■□□□□ 0.17
COL9A3-206ENST00000466532 KRCC1Q9NPI7 259 aaPredicted RBP16.12■□□□□ 0.17
COL9A3-206ENST00000466532 ATPIF1Q9UII2 106 aa16.12■□□□□ 0.17
COL9A3-206ENST00000466532 POLR3KQ9Y2Y1 108 aaPredicted RBP16.12■□□□□ 0.17
COL9A3-206ENST00000466532 PPIAL4AQ9Y536 164 aa16.12■□□□□ 0.17
COL9A3-206ENST00000466532 AUP1Q9Y679 476 aa16.12■□□□□ 0.17
COL9A3-206ENST00000466532 J3QW42 95 aa16.11■□□□□ 0.17
COL9A3-206ENST00000466532 GPANK1O95872 356 aa16.11■□□□□ 0.17
COL9A3-206ENST00000466532 TXNDC12O95881 172 aa16.11■□□□□ 0.17
COL9A3-206ENST00000466532 ZNF12P17014 697 aa16.11■□□□□ 0.17
COL9A3-206ENST00000466532 MDH2P40926 338 aaKnown RBP16.11■□□□□ 0.17
COL9A3-206ENST00000466532 CDKN2AP42771 156 aaKnown RBP16.11■□□□□ 0.17
COL9A3-206ENST00000466532 MMP16P51512 607 aa16.11■□□□□ 0.17
COL9A3-206ENST00000466532 UBA52P62987 128 aaKnown RBP16.11■□□□□ 0.17
COL9A3-206ENST00000466532 SEC23BQ15437 767 aa16.11■□□□□ 0.17
COL9A3-206ENST00000466532 KCNMB1Q16558 191 aa16.11■□□□□ 0.17
COL9A3-206ENST00000466532 HSP90B2PQ58FF3 399 aa16.11■□□□□ 0.17
COL9A3-206ENST00000466532 OR2T2Q6IF00 324 aa16.11■□□□□ 0.17
COL9A3-206ENST00000466532 DNM1P34Q6PK57 102 aa16.11■□□□□ 0.17
COL9A3-206ENST00000466532 FBXW12Q6X9E4 464 aa16.11■□□□□ 0.17
COL9A3-206ENST00000466532 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.11■□□□□ 0.17
COL9A3-206ENST00000466532 OR52J3Q8NH60 311 aa16.11■□□□□ 0.17
COL9A3-206ENST00000466532 APOBEC3DQ96AK3 386 aaPredicted RBP16.11■□□□□ 0.17
COL9A3-206ENST00000466532 TSSK2Q96PF2 358 aa16.11■□□□□ 0.17
COL9A3-206ENST00000466532 GCM1Q9NP62 436 aa16.11■□□□□ 0.17
COL9A3-206ENST00000466532 DDX28Q9NUL7 540 aaKnown RBP16.11■□□□□ 0.17
COL9A3-206ENST00000466532 SAMD4AQ9UPU9 718 aaKnown RBP16.11■□□□□ 0.17
COL9A3-206ENST00000466532 INSIG2Q9Y5U4 225 aa16.11■□□□□ 0.17
COL9A3-206ENST00000466532 A8MXK9 166 aa16.1■□□□□ 0.17
COL9A3-206ENST00000466532 F5H0A9 414 aaPredicted RBP16.1■□□□□ 0.17
COL9A3-206ENST00000466532 TMEM178BH3BS89 294 aa16.1■□□□□ 0.17
COL9A3-206ENST00000466532 PPP1R3DO95685 299 aa16.1■□□□□ 0.17
COL9A3-206ENST00000466532 CRABP1P29762 137 aa16.1■□□□□ 0.17
COL9A3-206ENST00000466532 MDH1P40925 334 aaKnown RBP16.1■□□□□ 0.17
COL9A3-206ENST00000466532 KRT72Q14CN4 511 aa16.1■□□□□ 0.17
COL9A3-206ENST00000466532 MEP1BQ16820 701 aa16.1■□□□□ 0.17
COL9A3-206ENST00000466532 ESCO2Q56NI9 601 aa16.1■□□□□ 0.17
COL9A3-206ENST00000466532 SLC27A4Q6P1M0 643 aa16.1■□□□□ 0.17
COL9A3-206ENST00000466532 PGM2L1Q6PCE3 622 aa16.1■□□□□ 0.17
COL9A3-206ENST00000466532 SMARCD3Q6STE5 483 aa16.1■□□□□ 0.17
COL9A3-206ENST00000466532 RBMS3Q6XE24 437 aaKnown RBP16.1■□□□□ 0.17
COL9A3-206ENST00000466532 MUC20Q8N307 709 aaPredicted RBP16.1■□□□□ 0.17
COL9A3-206ENST00000466532 FAM86B1Q8N7N1 296 aa16.1■□□□□ 0.17
COL9A3-206ENST00000466532 GJC3Q8NFK1 279 aa16.1■□□□□ 0.17
COL9A3-206ENST00000466532 OR8G5Q8NG78 346 aa16.1■□□□□ 0.17
COL9A3-206ENST00000466532 OR10AD1Q8NGE0 317 aa16.1■□□□□ 0.17
COL9A3-206ENST00000466532 C7orf34Q96L11 122 aa16.1■□□□□ 0.17
COL9A3-206ENST00000466532 COQ7Q99807 217 aa16.1■□□□□ 0.17
COL9A3-206ENST00000466532 MRI1Q9BV20 369 aa16.1■□□□□ 0.17
COL9A3-206ENST00000466532 HDHD2Q9H0R4 259 aa16.1■□□□□ 0.17
COL9A3-206ENST00000466532 DCAF13Q9NV06 445 aaKnown RBP16.1■□□□□ 0.17
COL9A3-206ENST00000466532 NUP50Q9UKX7 468 aa16.1■□□□□ 0.17
COL9A3-206ENST00000466532 LHFPL6Q9Y693 200 aa16.1■□□□□ 0.17
COL9A3-206ENST00000466532 CEACAM18A8MTB9 384 aa16.09■□□□□ 0.17
COL9A3-206ENST00000466532 IFNL4K9M1U5 179 aa16.09■□□□□ 0.17
COL9A3-206ENST00000466532 DCTN6O00399 190 aa16.09■□□□□ 0.17
COL9A3-206ENST00000466532 GMNNO75496 209 aa16.09■□□□□ 0.17
COL9A3-206ENST00000466532 HIST1H3AP68431 136 aa16.09■□□□□ 0.17
COL9A3-206ENST00000466532 AWAT1Q58HT5 328 aa16.09■□□□□ 0.17
COL9A3-206ENST00000466532 HIST2H3PS2Q5TEC6 136 aa16.09■□□□□ 0.17
COL9A3-206ENST00000466532 HIST2H3AQ71DI3 136 aa16.09■□□□□ 0.17
COL9A3-206ENST00000466532 SIGLECL1Q8N7X8 197 aa16.09■□□□□ 0.17
COL9A3-206ENST00000466532 OR13G1Q8NGZ3 307 aa16.09■□□□□ 0.17
COL9A3-206ENST00000466532 ZNF420Q8TAQ5 688 aaPredicted RBP16.09■□□□□ 0.17
COL9A3-206ENST00000466532 CMTM5Q96DZ9 223 aa16.09■□□□□ 0.17
COL9A3-206ENST00000466532 MEGF10Q96KG7 1140 aa16.09■□□□□ 0.17
COL9A3-206ENST00000466532 DHRS1Q96LJ7 313 aa16.09■□□□□ 0.17
COL9A3-206ENST00000466532 ZNF582Q96NG8 517 aaPredicted RBP16.09■□□□□ 0.17
COL9A3-206ENST00000466532 ERMAPQ96PL5 475 aaPredicted RBP16.09■□□□□ 0.17
COL9A3-206ENST00000466532 GPA33Q99795 319 aa16.09■□□□□ 0.17
COL9A3-206ENST00000466532 SPAG4Q9NPE6 437 aa16.09■□□□□ 0.17
COL9A3-206ENST00000466532 ADA2Q9NZK5 511 aa16.09■□□□□ 0.17
COL9A3-206ENST00000466532 ZNF69Q9UC07 566 aa16.09■□□□□ 0.17
COL9A3-206ENST00000466532 OR5V1Q9UGF6 321 aa16.09■□□□□ 0.17
COL9A3-206ENST00000466532 V9GYQ6 96 aa16.09■□□□□ 0.17
COL9A3-206ENST00000466532 H0YL77 283 aa16.08■□□□□ 0.16
COL9A3-206ENST00000466532 SPRY1O43609 319 aaPredicted RBP16.08■□□□□ 0.16
COL9A3-206ENST00000466532 SRP9P49458 86 aaKnown RBP16.08■□□□□ 0.16
COL9A3-206ENST00000466532 KLF17Q5JT82 389 aaPredicted RBP16.08■□□□□ 0.16
COL9A3-206ENST00000466532 LEG1Q6P5S2 330 aa16.08■□□□□ 0.16
COL9A3-206ENST00000466532 CORO6Q6QEF8 472 aa16.08■□□□□ 0.16
COL9A3-206ENST00000466532 JAZF1Q86VZ6 243 aa16.08■□□□□ 0.16
COL9A3-206ENST00000466532 RNF148Q8N7C7 305 aa16.08■□□□□ 0.16
COL9A3-206ENST00000466532 BHLHE23Q8NDY6 225 aa16.08■□□□□ 0.16
COL9A3-206ENST00000466532 FANK1Q8TC84 345 aa16.08■□□□□ 0.16
COL9A3-206ENST00000466532 FUZQ9BT04 418 aa16.08■□□□□ 0.16
COL9A3-206ENST00000466532 SRA1Q9HD15 236 aaKnown RBP16.08■□□□□ 0.16
COL9A3-206ENST00000466532 B9D1Q9UPM9 204 aa16.08■□□□□ 0.16
COL9A3-206ENST00000466532 LRCH1Q9Y2L9 728 aa16.08■□□□□ 0.16
COL9A3-206ENST00000466532 IGLV1-36A0A0B4J1U3 117 aa16.07■□□□□ 0.16
COL9A3-206ENST00000466532 IGHV3-64DA0A0J9YX35 117 aa16.07■□□□□ 0.16
COL9A3-206ENST00000466532 MLNRO43193 412 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms