RNA–Protein interactions for RNA: ENST00000465269.5

HDAC6-214, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-214ENST00000465269 LY6EQ16553 131 aa12.28□□□□□ -0.44
HDAC6-214ENST00000465269 ZNF74Q16587 644 aa12.28□□□□□ -0.44
HDAC6-214ENST00000465269 C10orf128Q5T292 105 aa12.28□□□□□ -0.44
HDAC6-214ENST00000465269 OR2T2Q6IF00 324 aa12.28□□□□□ -0.44
HDAC6-214ENST00000465269 PGBD2Q6P3X8 592 aa12.28□□□□□ -0.44
HDAC6-214ENST00000465269 DCDC5Q6ZRR9 648 aa12.28□□□□□ -0.44
HDAC6-214ENST00000465269 PTOV1Q86YD1 416 aa12.28□□□□□ -0.44
HDAC6-214ENST00000465269 VANGL1Q8TAA9 524 aaPredicted RBP12.28□□□□□ -0.44
HDAC6-214ENST00000465269 BCAS4Q8TDM0 211 aa12.28□□□□□ -0.44
HDAC6-214ENST00000465269 ASB10Q8WXI3 467 aa12.28□□□□□ -0.44
HDAC6-214ENST00000465269 SLC7A6Q92536 515 aa12.28□□□□□ -0.44
HDAC6-214ENST00000465269 SLC35B4Q969S0 331 aa12.28□□□□□ -0.44
HDAC6-214ENST00000465269 TMEM43Q9BTV4 400 aa12.28□□□□□ -0.44
HDAC6-214ENST00000465269 TMEM27Q9HBJ8 222 aa12.28□□□□□ -0.44
HDAC6-214ENST00000465269 ARL2BPQ9Y2Y0 163 aa12.28□□□□□ -0.44
HDAC6-214ENST00000465269 MCIDASD6RGH6 385 aa12.27□□□□□ -0.45
HDAC6-214ENST00000465269 OR10H3O60404 316 aa12.27□□□□□ -0.45
HDAC6-214ENST00000465269 MT-ATP6P00846 226 aa12.27□□□□□ -0.45
HDAC6-214ENST00000465269 PRKAR1BP31321 381 aa12.27□□□□□ -0.45
HDAC6-214ENST00000465269 KLRD1Q13241 179 aa12.27□□□□□ -0.45
HDAC6-214ENST00000465269 SFRP4Q6FHJ7 346 aaPredicted RBP12.27□□□□□ -0.45
HDAC6-214ENST00000465269 ARL9Q6T311 187 aa12.27□□□□□ -0.45
HDAC6-214ENST00000465269 VMO1Q7Z5L0 202 aa12.27□□□□□ -0.45
HDAC6-214ENST00000465269 C10orf111Q8N326 155 aa12.27□□□□□ -0.45
HDAC6-214ENST00000465269 BOLLQ8N9W6 283 aaKnown RBP12.27□□□□□ -0.45
HDAC6-214ENST00000465269 BHLHE23Q8NDY6 225 aa12.27□□□□□ -0.45
HDAC6-214ENST00000465269 NFKBIDQ8NI38 313 aa12.27□□□□□ -0.45
HDAC6-214ENST00000465269 HAVCR1Q96D42 359 aa12.27□□□□□ -0.45
HDAC6-214ENST00000465269 NMD3Q96D46 503 aaKnown RBP12.27□□□□□ -0.45
HDAC6-214ENST00000465269 SPDL1Q96EA4 605 aa12.27□□□□□ -0.45
HDAC6-214ENST00000465269 SEPHS2Q99611 448 aa12.27□□□□□ -0.45
HDAC6-214ENST00000465269 CNTD2Q9H8S5 307 aa12.27□□□□□ -0.45
HDAC6-214ENST00000465269 BCL2L10Q9HD36 194 aa12.27□□□□□ -0.45
HDAC6-214ENST00000465269 ANGPT4Q9Y264 503 aa12.27□□□□□ -0.45
HDAC6-214ENST00000465269 CSMD3Q7Z407 3707 aa12.27□□□□□ -0.45
HDAC6-214ENST00000465269 HUWE1Q7Z6Z7 4374 aaKnown RBP12.26□□□□□ -0.45
HDAC6-214ENST00000465269 RNASEK-C17orf49H0YIS7 233 aa12.26□□□□□ -0.45
HDAC6-214ENST00000465269 BLOC1S5-TXNDC5H3BN57 136 aa12.26□□□□□ -0.45
HDAC6-214ENST00000465269 NDUFAB1O14561 156 aa12.26□□□□□ -0.45
HDAC6-214ENST00000465269 THY1P04216 161 aa12.26□□□□□ -0.45
HDAC6-214ENST00000465269 HLA-DPB1P04440 258 aa12.26□□□□□ -0.45
HDAC6-214ENST00000465269 SCG5P05408 212 aa12.26□□□□□ -0.45
HDAC6-214ENST00000465269 FBP1P09467 338 aa12.26□□□□□ -0.45
HDAC6-214ENST00000465269 ACADSP16219 412 aa12.26□□□□□ -0.45
HDAC6-214ENST00000465269 PAX6P26367 422 aa12.26□□□□□ -0.45
HDAC6-214ENST00000465269 RPL4P36578 427 aaKnown RBP12.26□□□□□ -0.45
HDAC6-214ENST00000465269 CBX1P83916 185 aa12.26□□□□□ -0.45
HDAC6-214ENST00000465269 HABP2Q14520 560 aaPredicted RBP12.26□□□□□ -0.45
HDAC6-214ENST00000465269 OTPQ5XKR4 325 aa12.26□□□□□ -0.45
HDAC6-214ENST00000465269 SLC2A7Q6PXP3 512 aa12.26□□□□□ -0.45
HDAC6-214ENST00000465269 CCDC197Q8NCU1 140 aa12.26□□□□□ -0.45
HDAC6-214ENST00000465269 BBS10Q8TAM1 723 aa12.26□□□□□ -0.45
HDAC6-214ENST00000465269 HDAC2Q92769 488 aaKnown RBP12.26□□□□□ -0.45
HDAC6-214ENST00000465269 CITED2Q99967 270 aaPredicted RBP12.26□□□□□ -0.45
HDAC6-214ENST00000465269 B9D2Q9BPU9 175 aa12.26□□□□□ -0.45
HDAC6-214ENST00000465269 NANSQ9NR45 359 aa12.26□□□□□ -0.45
HDAC6-214ENST00000465269 SIRT7Q9NRC8 400 aa12.26□□□□□ -0.45
HDAC6-214ENST00000465269 UFSP2Q9NUQ7 469 aa12.26□□□□□ -0.45
HDAC6-214ENST00000465269 PTTG3PQ9NZH4 202 aa12.26□□□□□ -0.45
HDAC6-214ENST00000465269 MEGF11A6BM72 1044 aa12.25□□□□□ -0.45
HDAC6-214ENST00000465269 TMEM247A6NEH6 219 aa12.25□□□□□ -0.45
HDAC6-214ENST00000465269 IFNL4K9M1U5 179 aa12.25□□□□□ -0.45
HDAC6-214ENST00000465269 M0R3H8 397 aa12.25□□□□□ -0.45
HDAC6-214ENST00000465269 FBXO24O75426 580 aa12.25□□□□□ -0.45
HDAC6-214ENST00000465269 LYPD3O95274 346 aa12.25□□□□□ -0.45
HDAC6-214ENST00000465269 ANP32DO95626 131 aa12.25□□□□□ -0.45
HDAC6-214ENST00000465269 UMPSP11172 480 aa12.25□□□□□ -0.45
HDAC6-214ENST00000465269 CD33P20138 364 aa12.25□□□□□ -0.45
HDAC6-214ENST00000465269 HOXD3P31249 432 aaPredicted RBP12.25□□□□□ -0.45
HDAC6-214ENST00000465269 ZNF133P52736 654 aaPredicted RBP12.25□□□□□ -0.45
HDAC6-214ENST00000465269 UGT2B15P54855 530 aa12.25□□□□□ -0.45
HDAC6-214ENST00000465269 RPL18Q07020 188 aaKnown RBP12.25□□□□□ -0.45
HDAC6-214ENST00000465269 CD47Q08722 323 aa12.25□□□□□ -0.45
HDAC6-214ENST00000465269 POU4F2Q12837 409 aa12.25□□□□□ -0.45
HDAC6-214ENST00000465269 ENDOGQ14249 297 aaKnown RBP12.25□□□□□ -0.45
HDAC6-214ENST00000465269 PAGE3Q5JUK9 113 aa12.25□□□□□ -0.45
HDAC6-214ENST00000465269 PRAMEF6Q5VXH4 476 aa12.25□□□□□ -0.45
HDAC6-214ENST00000465269 CD276Q5ZPR3 534 aa12.25□□□□□ -0.45
HDAC6-214ENST00000465269 DHRS4L2Q6PKH6 230 aa12.25□□□□□ -0.45
HDAC6-214ENST00000465269 TSPYL5Q86VY4 417 aaPredicted RBP12.25□□□□□ -0.45
HDAC6-214ENST00000465269 CALHM3Q86XJ0 350 aa12.25□□□□□ -0.45
HDAC6-214ENST00000465269 ALDH16A1Q8IZ83 802 aa12.25□□□□□ -0.45
HDAC6-214ENST00000465269 PNLDC1Q8NA58 520 aaKnown RBP12.25□□□□□ -0.45
HDAC6-214ENST00000465269 C17orf50Q8WW18 174 aa12.25□□□□□ -0.45
HDAC6-214ENST00000465269 MYLK2Q9H1R3 596 aa12.25□□□□□ -0.45
HDAC6-214ENST00000465269 RMND5AQ9H871 391 aa12.25□□□□□ -0.45
HDAC6-214ENST00000465269 NDUFAF1Q9Y375 327 aa12.25□□□□□ -0.45
HDAC6-214ENST00000465269 TIMM10BQ9Y5J6 103 aa12.25□□□□□ -0.45
HDAC6-214ENST00000465269 CAPN7Q9Y6W3 813 aa12.25□□□□□ -0.45
HDAC6-214ENST00000465269 HYDINQ4G0P3 5121 aa12.25□□□□□ -0.45
HDAC6-214ENST00000465269 A0A1W2PRX2 142 aa12.24□□□□□ -0.45
HDAC6-214ENST00000465269 ELOVL7A1L3X0 281 aa12.24□□□□□ -0.45
HDAC6-214ENST00000465269 LRRC30A6NM36 301 aa12.24□□□□□ -0.45
HDAC6-214ENST00000465269 C5orf58C9J3I9 102 aa12.24□□□□□ -0.45
HDAC6-214ENST00000465269 H3BUX3 64 aa12.24□□□□□ -0.45
HDAC6-214ENST00000465269 ADAM20O43506 726 aa12.24□□□□□ -0.45
HDAC6-214ENST00000465269 FAM20BO75063 409 aa12.24□□□□□ -0.45
HDAC6-214ENST00000465269 LIPFP07098 398 aa12.24□□□□□ -0.45
HDAC6-214ENST00000465269 ASAH2BP0C7U1 165 aa12.24□□□□□ -0.45
HDAC6-214ENST00000465269 AQP1P29972 269 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms