RNA–Protein interactions for RNA: ENST00000463230.5

R3HDM1-213, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 2,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-213ENST00000463230 KLF14Q8TD94 323 aaPredicted RBP11.19□□□□□ -0.62
R3HDM1-213ENST00000463230 APOBEC3DQ96AK3 386 aaPredicted RBP11.19□□□□□ -0.62
R3HDM1-213ENST00000463230 MYEF2Q9P2K5 600 aaKnown RBP11.19□□□□□ -0.62
R3HDM1-213ENST00000463230 CHD3Q12873 2000 aaKnown RBP11.18□□□□□ -0.62
R3HDM1-213ENST00000463230 C17orf100A8MU93 164 aa11.18□□□□□ -0.62
R3HDM1-213ENST00000463230 G3V2T6 193 aa11.18□□□□□ -0.62
R3HDM1-213ENST00000463230 DAOP14920 347 aa11.18□□□□□ -0.62
R3HDM1-213ENST00000463230 PYCR1P32322 319 aa11.18□□□□□ -0.62
R3HDM1-213ENST00000463230 ERVS71-1P61550 626 aa11.18□□□□□ -0.62
R3HDM1-213ENST00000463230 HS3ST5Q8IZT8 346 aa11.18□□□□□ -0.62
R3HDM1-213ENST00000463230 CENPNQ96H22 339 aaPredicted RBP11.18□□□□□ -0.62
R3HDM1-213ENST00000463230 ATF6BQ99941 703 aa11.18□□□□□ -0.62
R3HDM1-213ENST00000463230 OR51B6Q9H340 312 aa11.18□□□□□ -0.62
R3HDM1-213ENST00000463230 MARCH7Q9H992 704 aa11.18□□□□□ -0.62
R3HDM1-213ENST00000463230 DDX28Q9NUL7 540 aaKnown RBP11.18□□□□□ -0.62
R3HDM1-213ENST00000463230 FZR1Q9UM11 496 aa11.18□□□□□ -0.62
R3HDM1-213ENST00000463230 COMMD3-BMI1R4GMX3 469 aa11.18□□□□□ -0.62
R3HDM1-213ENST00000463230 ACANP16112 2415 aa11.18□□□□□ -0.62
R3HDM1-213ENST00000463230 A0A096LNT2 108 aa11.17□□□□□ -0.62
R3HDM1-213ENST00000463230 SMAD7O15105 426 aaKnown RBP11.17□□□□□ -0.62
R3HDM1-213ENST00000463230 SURF4O15260 269 aa11.17□□□□□ -0.62
R3HDM1-213ENST00000463230 PRODHO43272 600 aa11.17□□□□□ -0.62
R3HDM1-213ENST00000463230 GPANK1O95872 356 aa11.17□□□□□ -0.62
R3HDM1-213ENST00000463230 CLPTM1O96005 669 aa11.17□□□□□ -0.62
R3HDM1-213ENST00000463230 KITLGP21583 273 aa11.17□□□□□ -0.62
R3HDM1-213ENST00000463230 PRKACGP22612 351 aa11.17□□□□□ -0.62
R3HDM1-213ENST00000463230 ALDH3B1P43353 468 aa11.17□□□□□ -0.62
R3HDM1-213ENST00000463230 CRISP1P54107 249 aa11.17□□□□□ -0.62
R3HDM1-213ENST00000463230 SLC35D3Q5M8T2 416 aa11.17□□□□□ -0.62
R3HDM1-213ENST00000463230 ICA1LQ8NDH6 482 aa11.17□□□□□ -0.62
R3HDM1-213ENST00000463230 OR9Q1Q8NGQ5 310 aa11.17□□□□□ -0.62
R3HDM1-213ENST00000463230 PLEKHA8Q96JA3 519 aa11.17□□□□□ -0.62
R3HDM1-213ENST00000463230 RAB3IPQ96QF0 476 aaPredicted RBP11.17□□□□□ -0.62
R3HDM1-213ENST00000463230 PITX2Q99697 317 aa11.17□□□□□ -0.62
R3HDM1-213ENST00000463230 OR2J1Q9GZK6 312 aa11.17□□□□□ -0.62
R3HDM1-213ENST00000463230 ZDHHC8Q9ULC8 765 aa11.17□□□□□ -0.62
R3HDM1-213ENST00000463230 GRIP1Q9Y3R0 1128 aa11.17□□□□□ -0.62
R3HDM1-213ENST00000463230 TEP1Q99973 2627 aaKnown RBP11.17□□□□□ -0.62
R3HDM1-213ENST00000463230 PLSCR5A0PG75 271 aa11.17□□□□□ -0.62
R3HDM1-213ENST00000463230 PRR23D1E9PI22 279 aaPredicted RBP11.17□□□□□ -0.62
R3HDM1-213ENST00000463230 GLCEO94923 617 aa11.17□□□□□ -0.62
R3HDM1-213ENST00000463230 PRR23D2P0DMB1 279 aaPredicted RBP11.17□□□□□ -0.62
R3HDM1-213ENST00000463230 RAC2P15153 192 aa11.17□□□□□ -0.62
R3HDM1-213ENST00000463230 POU1F1P28069 291 aa11.17□□□□□ -0.62
R3HDM1-213ENST00000463230 NR4A2P43354 598 aa11.17□□□□□ -0.62
R3HDM1-213ENST00000463230 ERFP50548 548 aa11.17□□□□□ -0.62
R3HDM1-213ENST00000463230 ACSM5Q6NUN0 579 aa11.17□□□□□ -0.62
R3HDM1-213ENST00000463230 FBXW12Q6X9E4 464 aa11.17□□□□□ -0.62
R3HDM1-213ENST00000463230 CFAP77Q6ZQR2 320 aa11.17□□□□□ -0.62
R3HDM1-213ENST00000463230 COLCA1Q6ZS62 124 aa11.17□□□□□ -0.62
R3HDM1-213ENST00000463230 IQCF1Q8N6M8 205 aa11.17□□□□□ -0.62
R3HDM1-213ENST00000463230 RDH5Q92781 318 aa11.17□□□□□ -0.62
R3HDM1-213ENST00000463230 PTP4A1Q93096 173 aa11.17□□□□□ -0.62
R3HDM1-213ENST00000463230 SPTSSAQ969W0 71 aa11.17□□□□□ -0.62
R3HDM1-213ENST00000463230 C1QTNF5Q9BXJ0 243 aa11.17□□□□□ -0.62
R3HDM1-213ENST00000463230 PNRC2Q9NPJ4 139 aaKnown RBP11.17□□□□□ -0.62
R3HDM1-213ENST00000463230 RTTNQ86VV8 2226 aa11.16□□□□□ -0.62
R3HDM1-213ENST00000463230 CR1P17927 2039 aa11.16□□□□□ -0.62
R3HDM1-213ENST00000463230 NGFP01138 241 aa11.16□□□□□ -0.62
R3HDM1-213ENST00000463230 USF1P22415 310 aaPredicted RBP11.16□□□□□ -0.62
R3HDM1-213ENST00000463230 MPV17P39210 176 aa11.16□□□□□ -0.62
R3HDM1-213ENST00000463230 DAPP51397 102 aa11.16□□□□□ -0.62
R3HDM1-213ENST00000463230 TPTEP56180 551 aa11.16□□□□□ -0.62
R3HDM1-213ENST00000463230 MAD2L1BPQ15013 274 aaPredicted RBP11.16□□□□□ -0.62
R3HDM1-213ENST00000463230 LINC01590Q5TEZ4 76 aa11.16□□□□□ -0.62
R3HDM1-213ENST00000463230 KDM4DQ6B0I6 523 aa11.16□□□□□ -0.62
R3HDM1-213ENST00000463230 RHOUQ7L0Q8 258 aa11.16□□□□□ -0.62
R3HDM1-213ENST00000463230 SHFQ7M4L6 423 aa11.16□□□□□ -0.62
R3HDM1-213ENST00000463230 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.16□□□□□ -0.62
R3HDM1-213ENST00000463230 HAVCR1Q96D42 359 aa11.16□□□□□ -0.62
R3HDM1-213ENST00000463230 TPK1Q9H3S4 243 aa11.16□□□□□ -0.62
R3HDM1-213ENST00000463230 KRT84Q9NSB2 600 aa11.16□□□□□ -0.62
R3HDM1-213ENST00000463230 LY6G6DO95868 133 aa11.16□□□□□ -0.62
R3HDM1-213ENST00000463230 ACSM4P0C7M7 580 aa11.16□□□□□ -0.62
R3HDM1-213ENST00000463230 SELEP16581 610 aa11.16□□□□□ -0.62
R3HDM1-213ENST00000463230 ZNF23P17027 643 aa11.16□□□□□ -0.62
R3HDM1-213ENST00000463230 ACHEP22303 614 aa11.16□□□□□ -0.62
R3HDM1-213ENST00000463230 GSTT1P30711 240 aa11.16□□□□□ -0.62
R3HDM1-213ENST00000463230 ZNF81P51508 661 aa11.16□□□□□ -0.62
R3HDM1-213ENST00000463230 CORO6Q6QEF8 472 aa11.16□□□□□ -0.62
R3HDM1-213ENST00000463230 LINC00346Q8IVM7 164 aa11.16□□□□□ -0.62
R3HDM1-213ENST00000463230 LRTOMTQ8WZ04 291 aa11.16□□□□□ -0.62
R3HDM1-213ENST00000463230 INTS14Q96SY0 518 aa11.16□□□□□ -0.62
R3HDM1-213ENST00000463230 CHODLQ9H9P2 273 aa11.16□□□□□ -0.62
R3HDM1-213ENST00000463230 STARD10Q9Y365 291 aa11.16□□□□□ -0.62
R3HDM1-213ENST00000463230 MAP1AP78559 2803 aaPredicted RBP11.15□□□□□ -0.62
R3HDM1-213ENST00000463230 LY6HO94772 140 aa11.15□□□□□ -0.62
R3HDM1-213ENST00000463230 CD55P08174 381 aa11.15□□□□□ -0.62
R3HDM1-213ENST00000463230 NAT2P11245 290 aa11.15□□□□□ -0.62
R3HDM1-213ENST00000463230 OTX1P32242 354 aaPredicted RBP11.15□□□□□ -0.62
R3HDM1-213ENST00000463230 MMP15P51511 669 aa11.15□□□□□ -0.62
R3HDM1-213ENST00000463230 SPATA46Q5T0L3 261 aa11.15□□□□□ -0.62
R3HDM1-213ENST00000463230 OR6K6Q8NGW6 343 aa11.15□□□□□ -0.62
R3HDM1-213ENST00000463230 MAP6Q96JE9 813 aa11.15□□□□□ -0.62
R3HDM1-213ENST00000463230 TOR3AQ9H497 397 aa11.15□□□□□ -0.62
R3HDM1-213ENST00000463230 GSX1Q9H4S2 264 aaPredicted RBP11.15□□□□□ -0.62
R3HDM1-213ENST00000463230 PURGQ9UJV8 347 aaKnown RBP11.15□□□□□ -0.62
R3HDM1-213ENST00000463230 TVP23AA6NH52 213 aa11.15□□□□□ -0.63
R3HDM1-213ENST00000463230 ZNF878C9JN71 531 aa11.15□□□□□ -0.63
R3HDM1-213ENST00000463230 ZNF593O00488 134 aaPredicted RBP11.15□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms