RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 AMELYQ99218 206 aa13.86□□□□□ -0.19
LMNB1-203ENST00000460265 SLC25A32Q9H2D1 315 aa13.86□□□□□ -0.19
LMNB1-203ENST00000460265 MOKQ9UQ07 419 aa13.86□□□□□ -0.19
LMNB1-203ENST00000460265 MUC22E2RYF6 1773 aaPredicted RBP13.86□□□□□ -0.19
LMNB1-203ENST00000460265 OR2T1O43869 369 aa13.85□□□□□ -0.19
LMNB1-203ENST00000460265 RBBP9O75884 186 aa13.85□□□□□ -0.19
LMNB1-203ENST00000460265 KLK3P07288 261 aaPredicted RBP13.85□□□□□ -0.19
LMNB1-203ENST00000460265 SLC2A1P11166 492 aa13.85□□□□□ -0.19
LMNB1-203ENST00000460265 FZD5Q13467 585 aa13.85□□□□□ -0.19
LMNB1-203ENST00000460265 OR10K2Q6IF99 312 aa13.85□□□□□ -0.19
LMNB1-203ENST00000460265 OR11G2Q8NGC1 345 aa13.85□□□□□ -0.19
LMNB1-203ENST00000460265 ZNF426Q9BUY5 554 aa13.85□□□□□ -0.19
LMNB1-203ENST00000460265 FRRS1LQ9P0K9 344 aa13.85□□□□□ -0.19
LMNB1-203ENST00000460265 KLHL9Q9P2J3 617 aa13.85□□□□□ -0.19
LMNB1-203ENST00000460265 CGGBP1Q9UFW8 167 aaPredicted RBP13.85□□□□□ -0.19
LMNB1-203ENST00000460265 CLDN16Q9Y5I7 305 aa13.85□□□□□ -0.19
LMNB1-203ENST00000460265 OR2J2O76002 312 aa13.85□□□□□ -0.19
LMNB1-203ENST00000460265 F10P00742 488 aa13.85□□□□□ -0.19
LMNB1-203ENST00000460265 GTF2F2P13984 249 aa13.85□□□□□ -0.19
LMNB1-203ENST00000460265 CTLA4P16410 223 aa13.85□□□□□ -0.19
LMNB1-203ENST00000460265 IL11P20809 199 aa13.85□□□□□ -0.19
LMNB1-203ENST00000460265 CALCRP30988 508 aa13.85□□□□□ -0.19
LMNB1-203ENST00000460265 RPL27P61353 136 aaKnown RBP13.85□□□□□ -0.19
LMNB1-203ENST00000460265 PCGF3Q3KNV8 242 aa13.85□□□□□ -0.19
LMNB1-203ENST00000460265 SCGB2B2Q4G0G5 96 aa13.85□□□□□ -0.19
LMNB1-203ENST00000460265 WDSUB1Q8N9V3 476 aa13.85□□□□□ -0.19
LMNB1-203ENST00000460265 RXFP4Q8TDU9 374 aa13.85□□□□□ -0.19
LMNB1-203ENST00000460265 DVL3Q92997 716 aaPredicted RBP13.85□□□□□ -0.19
LMNB1-203ENST00000460265 SRPK3Q9UPE1 567 aa13.85□□□□□ -0.19
LMNB1-203ENST00000460265 ALOX12BO75342 701 aa13.85□□□□□ -0.19
LMNB1-203ENST00000460265 WISP1O95388 367 aa13.85□□□□□ -0.19
LMNB1-203ENST00000460265 LY86O95711 162 aa13.85□□□□□ -0.19
LMNB1-203ENST00000460265 F12P00748 615 aaPredicted RBP13.85□□□□□ -0.19
LMNB1-203ENST00000460265 H2AFB1P0C5Y9 115 aa13.85□□□□□ -0.19
LMNB1-203ENST00000460265 SELLP14151 372 aa13.85□□□□□ -0.19
LMNB1-203ENST00000460265 CDK2P24941 298 aa13.85□□□□□ -0.19
LMNB1-203ENST00000460265 AP3S2P59780 193 aa13.85□□□□□ -0.19
LMNB1-203ENST00000460265 DCDP81605 110 aaKnown RBP13.85□□□□□ -0.19
LMNB1-203ENST00000460265 SLC38A9Q8NBW4 561 aa13.85□□□□□ -0.19
LMNB1-203ENST00000460265 OR52B4Q8NGK2 314 aa13.85□□□□□ -0.19
LMNB1-203ENST00000460265 TNFAIP8L1Q8WVP5 186 aa13.85□□□□□ -0.19
LMNB1-203ENST00000460265 MVB12AQ96EY5 273 aa13.85□□□□□ -0.19
LMNB1-203ENST00000460265 SLC25A44Q96H78 314 aaPredicted RBP13.85□□□□□ -0.19
LMNB1-203ENST00000460265 PRDM6Q9NQX0 595 aa13.85□□□□□ -0.19
LMNB1-203ENST00000460265 B9D1Q9UPM9 204 aa13.85□□□□□ -0.19
LMNB1-203ENST00000460265 A0A1B0GUH1 482 aa13.84□□□□□ -0.19
LMNB1-203ENST00000460265 TMEM269A0A1B0GVZ9 245 aa13.84□□□□□ -0.19
LMNB1-203ENST00000460265 PRR32B1ATL7 298 aa13.84□□□□□ -0.19
LMNB1-203ENST00000460265 J3QRE1 110 aa13.84□□□□□ -0.19
LMNB1-203ENST00000460265 ZNF35P13682 527 aa13.84□□□□□ -0.19
LMNB1-203ENST00000460265 MMP15P51511 669 aa13.84□□□□□ -0.19
LMNB1-203ENST00000460265 DEFA6Q01524 100 aa13.84□□□□□ -0.19
LMNB1-203ENST00000460265 H3F3CQ6NXT2 135 aa13.84□□□□□ -0.19
LMNB1-203ENST00000460265 GRINAQ7Z429 371 aa13.84□□□□□ -0.19
LMNB1-203ENST00000460265 OR13C3Q8NGS6 347 aa13.84□□□□□ -0.19
LMNB1-203ENST00000460265 AKIRIN1Q9H9L7 192 aaPredicted RBP13.84□□□□□ -0.19
LMNB1-203ENST00000460265 NPDC1Q9NQX5 325 aaPredicted RBP13.84□□□□□ -0.19
LMNB1-203ENST00000460265 SERINC1Q9NRX5 453 aa13.84□□□□□ -0.19
LMNB1-203ENST00000460265 ZFP57Q9NU63 452 aa13.84□□□□□ -0.19
LMNB1-203ENST00000460265 GHRLQ9UBU3 117 aa13.84□□□□□ -0.19
LMNB1-203ENST00000460265 DNAJC13O75165 2243 aa13.84□□□□□ -0.19
LMNB1-203ENST00000460265 OR6C65A6NJZ3 312 aa13.84□□□□□ -0.19
LMNB1-203ENST00000460265 TIAF1O95411 115 aa13.84□□□□□ -0.19
LMNB1-203ENST00000460265 CCR9P51686 369 aa13.84□□□□□ -0.19
LMNB1-203ENST00000460265 BIDP55957 195 aa13.84□□□□□ -0.19
LMNB1-203ENST00000460265 DLX5P56178 289 aa13.84□□□□□ -0.19
LMNB1-203ENST00000460265 UBE2MP61081 183 aaKnown RBP13.84□□□□□ -0.19
LMNB1-203ENST00000460265 RAB12Q6IQ22 244 aa13.84□□□□□ -0.19
LMNB1-203ENST00000460265 DCXRQ7Z4W1 244 aa13.84□□□□□ -0.19
LMNB1-203ENST00000460265 NAA40Q86UY6 237 aa13.84□□□□□ -0.19
LMNB1-203ENST00000460265 ZSCAN1Q8NBB4 408 aa13.84□□□□□ -0.19
LMNB1-203ENST00000460265 NAXEQ8NCW5 288 aa13.84□□□□□ -0.19
LMNB1-203ENST00000460265 FBXO17Q96EF6 278 aa13.84□□□□□ -0.19
LMNB1-203ENST00000460265 GPER1Q99527 375 aa13.84□□□□□ -0.19
LMNB1-203ENST00000460265 PRSS37A4D1T9 235 aa13.84□□□□□ -0.19
LMNB1-203ENST00000460265 ZNF726A6NNF4 738 aa13.84□□□□□ -0.19
LMNB1-203ENST00000460265 OGG1O15527 345 aa13.84□□□□□ -0.19
LMNB1-203ENST00000460265 MST1P26927 711 aa13.84□□□□□ -0.19
LMNB1-203ENST00000460265 PTH2RP49190 550 aa13.84□□□□□ -0.19
LMNB1-203ENST00000460265 SORDQ00796 357 aa13.84□□□□□ -0.19
LMNB1-203ENST00000460265 TMEM176BQ3YBM2 270 aaPredicted RBP13.84□□□□□ -0.19
LMNB1-203ENST00000460265 SPICQ8N5J4 248 aa13.84□□□□□ -0.19
LMNB1-203ENST00000460265 HRASLSQ9HDD0 168 aa13.84□□□□□ -0.19
LMNB1-203ENST00000460265 CAMK2AQ9UQM7 478 aa13.84□□□□□ -0.19
LMNB1-203ENST00000460265 PIN1P1O15428 100 aa13.83□□□□□ -0.2
LMNB1-203ENST00000460265 IGLV3-19P01714 112 aa13.83□□□□□ -0.2
LMNB1-203ENST00000460265 TMIGD3P0DMS9 266 aaPredicted RBP13.83□□□□□ -0.2
LMNB1-203ENST00000460265 CNR1P21554 472 aa13.83□□□□□ -0.2
LMNB1-203ENST00000460265 DCTDP32321 178 aa13.83□□□□□ -0.2
LMNB1-203ENST00000460265 SLC6A9P48067 706 aa13.83□□□□□ -0.2
LMNB1-203ENST00000460265 PNLIPRP2P54317 469 aa13.83□□□□□ -0.2
LMNB1-203ENST00000460265 DHODHQ02127 395 aa13.83□□□□□ -0.2
LMNB1-203ENST00000460265 C4orf46Q504U0 113 aa13.83□□□□□ -0.2
LMNB1-203ENST00000460265 UBE2NLQ5JXB2 153 aa13.83□□□□□ -0.2
LMNB1-203ENST00000460265 EEF1A1P5Q5VTE0 462 aa13.83□□□□□ -0.2
LMNB1-203ENST00000460265 TMPRSS13Q9BYE2 586 aa13.83□□□□□ -0.2
LMNB1-203ENST00000460265 SMOC1Q9H4F8 434 aa13.83□□□□□ -0.2
LMNB1-203ENST00000460265 TREM1Q9NP99 234 aa13.83□□□□□ -0.2
LMNB1-203ENST00000460265 ASF1BQ9NVP2 202 aa13.83□□□□□ -0.2
LMNB1-203ENST00000460265 PTRH2Q9Y3E5 179 aaKnown RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms