RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 NDEL1Q9GZM8 345 aa11.91□□□□□ -0.5
LYSMD3-202ENST00000453259 MARCH7Q9H992 704 aa11.91□□□□□ -0.5
LYSMD3-202ENST00000453259 TRIM36Q9NQ86 728 aa11.91□□□□□ -0.5
LYSMD3-202ENST00000453259 RAB21Q9UL25 225 aa11.91□□□□□ -0.5
LYSMD3-202ENST00000453259 STARD10Q9Y365 291 aa11.91□□□□□ -0.5
LYSMD3-202ENST00000453259 C5orf63A6NC05 138 aa11.9□□□□□ -0.5
LYSMD3-202ENST00000453259 OR6C6A6NF89 314 aa11.9□□□□□ -0.5
LYSMD3-202ENST00000453259 PSMB10P40306 273 aa11.9□□□□□ -0.5
LYSMD3-202ENST00000453259 CRYBA2P53672 197 aa11.9□□□□□ -0.5
LYSMD3-202ENST00000453259 CTXN1P60606 82 aa11.9□□□□□ -0.5
LYSMD3-202ENST00000453259 MAGOHP61326 146 aaKnown RBP11.9□□□□□ -0.5
LYSMD3-202ENST00000453259 SRSF4Q08170 494 aaKnown RBP11.9□□□□□ -0.5
LYSMD3-202ENST00000453259 C2orf68Q2NKX9 166 aa11.9□□□□□ -0.5
LYSMD3-202ENST00000453259 WDR25Q64LD2 544 aaPredicted RBP11.9□□□□□ -0.5
LYSMD3-202ENST00000453259 GDPGP1Q6ZNW5 385 aa11.9□□□□□ -0.5
LYSMD3-202ENST00000453259 CLDN22Q8N7P3 220 aa11.9□□□□□ -0.5
LYSMD3-202ENST00000453259 TAF15Q92804 592 aaKnown RBP eCLIP11.9□□□□□ -0.5
LYSMD3-202ENST00000453259 APOBEC3DQ96AK3 386 aaPredicted RBP11.9□□□□□ -0.5
LYSMD3-202ENST00000453259 EBF4Q9BQW3 602 aa11.9□□□□□ -0.5
LYSMD3-202ENST00000453259 POFUT1Q9H488 388 aa11.9□□□□□ -0.5
LYSMD3-202ENST00000453259 ASH2LQ9UBL3 628 aa11.9□□□□□ -0.5
LYSMD3-202ENST00000453259 NOP16Q9Y3C1 178 aaKnown RBP11.9□□□□□ -0.5
LYSMD3-202ENST00000453259 TEX13CA0A0J9YWL9 993 aa11.89□□□□□ -0.51
LYSMD3-202ENST00000453259 IQCF6A8MYZ5 107 aa11.89□□□□□ -0.51
LYSMD3-202ENST00000453259 ZNF879B4DU55 563 aa11.89□□□□□ -0.51
LYSMD3-202ENST00000453259 XKRYO14609 159 aa11.89□□□□□ -0.51
LYSMD3-202ENST00000453259 PROK1P58294 105 aa11.89□□□□□ -0.51
LYSMD3-202ENST00000453259 PIN1Q13526 163 aaPredicted RBP11.89□□□□□ -0.51
LYSMD3-202ENST00000453259 NFYCQ13952 458 aa11.89□□□□□ -0.51
LYSMD3-202ENST00000453259 ERICH5Q6P6B1 374 aa11.89□□□□□ -0.51
LYSMD3-202ENST00000453259 PGM2L1Q6PCE3 622 aa11.89□□□□□ -0.51
LYSMD3-202ENST00000453259 JAZF1Q86VZ6 243 aa11.89□□□□□ -0.51
LYSMD3-202ENST00000453259 LDLRAD3Q86YD5 345 aa11.89□□□□□ -0.51
LYSMD3-202ENST00000453259 PNLDC1Q8NA58 520 aaKnown RBP11.89□□□□□ -0.51
LYSMD3-202ENST00000453259 LRRC75AQ8NAA5 344 aa11.89□□□□□ -0.51
LYSMD3-202ENST00000453259 OR10AD1Q8NGE0 317 aa11.89□□□□□ -0.51
LYSMD3-202ENST00000453259 OR11L1Q8NGX0 322 aa11.89□□□□□ -0.51
LYSMD3-202ENST00000453259 OR10A6Q8NH74 314 aa11.89□□□□□ -0.51
LYSMD3-202ENST00000453259 LINC01006Q8NI28 216 aa11.89□□□□□ -0.51
LYSMD3-202ENST00000453259 TLCD1Q96CP7 247 aa11.89□□□□□ -0.51
LYSMD3-202ENST00000453259 DPAGT1Q9H3H5 408 aa11.89□□□□□ -0.51
LYSMD3-202ENST00000453259 TCF7L1Q9HCS4 588 aa11.89□□□□□ -0.51
LYSMD3-202ENST00000453259 ACOXLQ9NUZ1 547 aa11.89□□□□□ -0.51
LYSMD3-202ENST00000453259 GRHPRQ9UBQ7 328 aa11.89□□□□□ -0.51
LYSMD3-202ENST00000453259 SOX21Q9Y651 276 aaPredicted RBP11.89□□□□□ -0.51
LYSMD3-202ENST00000453259 DOCK11Q5JSL3 2073 aa11.89□□□□□ -0.51
LYSMD3-202ENST00000453259 CMYA5Q8N3K9 4069 aa11.89□□□□□ -0.51
LYSMD3-202ENST00000453259 NDUFA2O43678 99 aa11.88□□□□□ -0.51
LYSMD3-202ENST00000453259 CYB5R3P00387 301 aaPredicted RBP11.88□□□□□ -0.51
LYSMD3-202ENST00000453259 IFI30P13284 250 aa11.88□□□□□ -0.51
LYSMD3-202ENST00000453259 CFHR2P36980 270 aa11.88□□□□□ -0.51
LYSMD3-202ENST00000453259 SELPLGQ14242 412 aa11.88□□□□□ -0.51
LYSMD3-202ENST00000453259 ZNF841Q6ZN19 808 aa11.88□□□□□ -0.51
LYSMD3-202ENST00000453259 REC114Q7Z4M0 266 aa11.88□□□□□ -0.51
LYSMD3-202ENST00000453259 OAFQ86UD1 273 aa11.88□□□□□ -0.51
LYSMD3-202ENST00000453259 MOGAT3Q86VF5 341 aa11.88□□□□□ -0.51
LYSMD3-202ENST00000453259 RNF113BQ8IZP6 322 aaKnown RBP11.88□□□□□ -0.51
LYSMD3-202ENST00000453259 OR1F12Q8NHA8 337 aa11.88□□□□□ -0.51
LYSMD3-202ENST00000453259 ZNF420Q8TAQ5 688 aaPredicted RBP11.88□□□□□ -0.51
LYSMD3-202ENST00000453259 PRRC1Q96M27 445 aa11.88□□□□□ -0.51
LYSMD3-202ENST00000453259 HDHD2Q9H0R4 259 aa11.88□□□□□ -0.51
LYSMD3-202ENST00000453259 C16orf95Q9H693 158 aa11.88□□□□□ -0.51
LYSMD3-202ENST00000453259 EMC7Q9NPA0 242 aa11.88□□□□□ -0.51
LYSMD3-202ENST00000453259 MRGBPQ9NV56 204 aa11.88□□□□□ -0.51
LYSMD3-202ENST00000453259 PRSS37A4D1T9 235 aa11.87□□□□□ -0.51
LYSMD3-202ENST00000453259 FBP2O00757 339 aa11.87□□□□□ -0.51
LYSMD3-202ENST00000453259 GPR137BO60478 399 aa11.87□□□□□ -0.51
LYSMD3-202ENST00000453259 TOX4O94842 621 aa11.87□□□□□ -0.51
LYSMD3-202ENST00000453259 NPPAP01160 153 aa11.87□□□□□ -0.51
LYSMD3-202ENST00000453259 MMP9P14780 707 aa11.87□□□□□ -0.51
LYSMD3-202ENST00000453259 GZMMP51124 257 aa11.87□□□□□ -0.51
LYSMD3-202ENST00000453259 HNRNPA0Q13151 305 aaKnown RBP11.87□□□□□ -0.51
LYSMD3-202ENST00000453259 CYLC2Q14093 348 aaPredicted RBP11.87□□□□□ -0.51
LYSMD3-202ENST00000453259 METTL11BQ5VVY1 283 aa11.87□□□□□ -0.51
LYSMD3-202ENST00000453259 IGFN1Q86VF2 1251 aa11.87□□□□□ -0.51
LYSMD3-202ENST00000453259 GLB1L2Q8IW92 636 aa11.87□□□□□ -0.51
LYSMD3-202ENST00000453259 ZSCAN4Q8NAM6 433 aaPredicted RBP11.87□□□□□ -0.51
LYSMD3-202ENST00000453259 PLPP7Q8NBV4 271 aa11.87□□□□□ -0.51
LYSMD3-202ENST00000453259 OR8J3Q8NGG0 315 aa11.87□□□□□ -0.51
LYSMD3-202ENST00000453259 DMRTB1Q96MA1 342 aa11.87□□□□□ -0.51
LYSMD3-202ENST00000453259 ZNF583Q96ND8 569 aa11.87□□□□□ -0.51
LYSMD3-202ENST00000453259 WDFY2Q96P53 400 aa11.87□□□□□ -0.51
LYSMD3-202ENST00000453259 COQ7Q99807 217 aa11.87□□□□□ -0.51
LYSMD3-202ENST00000453259 PCGF1Q9BSM1 259 aa11.87□□□□□ -0.51
LYSMD3-202ENST00000453259 CDADC1Q9BWV3 514 aa11.87□□□□□ -0.51
LYSMD3-202ENST00000453259 HCAR1Q9BXC0 346 aa11.87□□□□□ -0.51
LYSMD3-202ENST00000453259 SLC22A4Q9H015 551 aa11.87□□□□□ -0.51
LYSMD3-202ENST00000453259 TMEM100Q9NV29 134 aa11.87□□□□□ -0.51
LYSMD3-202ENST00000453259 ERVK-18Q9QC07 812 aa11.87□□□□□ -0.51
LYSMD3-202ENST00000453259 CAB39Q9Y376 341 aaPredicted RBP11.87□□□□□ -0.51
LYSMD3-202ENST00000453259 IGHV1-69DA0A0B4J2H0 117 aa11.86□□□□□ -0.51
LYSMD3-202ENST00000453259 CENPVL3A0A0U1RRI6 287 aa11.86□□□□□ -0.51
LYSMD3-202ENST00000453259 C22orf46C9J442 243 aa11.86□□□□□ -0.51
LYSMD3-202ENST00000453259 MLNRO43193 412 aa11.86□□□□□ -0.51
LYSMD3-202ENST00000453259 ECDO95905 644 aaPredicted RBP11.86□□□□□ -0.51
LYSMD3-202ENST00000453259 IGHV1-69P01742 117 aa11.86□□□□□ -0.51
LYSMD3-202ENST00000453259 CD14P08571 375 aa11.86□□□□□ -0.51
LYSMD3-202ENST00000453259 CD200P41217 278 aa11.86□□□□□ -0.51
LYSMD3-202ENST00000453259 IER3P46695 156 aa11.86□□□□□ -0.51
LYSMD3-202ENST00000453259 ERFP50548 548 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms