RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 TVP23AA6NH52 213 aa12.48□□□□□ -0.41
USP39-206ENST00000448971 CLPTM1O96005 669 aa12.48□□□□□ -0.41
USP39-206ENST00000448971 TFP02787 698 aa12.48□□□□□ -0.41
USP39-206ENST00000448971 FAM157CP0CG43 387 aa12.48□□□□□ -0.41
USP39-206ENST00000448971 SPI1P17947 270 aa12.48□□□□□ -0.41
USP39-206ENST00000448971 PAICSP22234 425 aaKnown RBP12.48□□□□□ -0.41
USP39-206ENST00000448971 PDLIM4P50479 330 aa12.48□□□□□ -0.41
USP39-206ENST00000448971 PPP1CBP62140 327 aa12.48□□□□□ -0.41
USP39-206ENST00000448971 ZNF718Q3SXZ3 478 aa12.48□□□□□ -0.41
USP39-206ENST00000448971 CCDC92Q53HC0 331 aaPredicted RBP12.48□□□□□ -0.41
USP39-206ENST00000448971 ELFN2Q5R3F8 820 aa12.48□□□□□ -0.41
USP39-206ENST00000448971 TMEM154Q6P9G4 183 aa12.48□□□□□ -0.41
USP39-206ENST00000448971 ZCCHC24Q8N2G6 241 aaKnown RBP12.48□□□□□ -0.41
USP39-206ENST00000448971 OR1F12Q8NHA8 337 aa12.48□□□□□ -0.41
USP39-206ENST00000448971 SLC25A40Q8TBP6 338 aa12.48□□□□□ -0.41
USP39-206ENST00000448971 IPCEF1Q8WWN9 437 aaPredicted RBP12.48□□□□□ -0.41
USP39-206ENST00000448971 SLC7A6Q92536 515 aa12.48□□□□□ -0.41
USP39-206ENST00000448971 PLEKHA8Q96JA3 519 aa12.48□□□□□ -0.41
USP39-206ENST00000448971 RBM4Q9BWF3 364 aaKnown RBP12.48□□□□□ -0.41
USP39-206ENST00000448971 MS4A5Q9H3V2 200 aa12.48□□□□□ -0.41
USP39-206ENST00000448971 MYOZ1Q9NP98 299 aaPredicted RBP12.48□□□□□ -0.41
USP39-206ENST00000448971 SLCO1C1Q9NYB5 712 aa12.48□□□□□ -0.41
USP39-206ENST00000448971 TAAR3PQ9P1P4 343 aa12.48□□□□□ -0.41
USP39-206ENST00000448971 ATPIF1Q9UII2 106 aa12.48□□□□□ -0.41
USP39-206ENST00000448971 KCNG2Q9UJ96 466 aa12.48□□□□□ -0.41
USP39-206ENST00000448971 GRIP1Q9Y3R0 1128 aa12.48□□□□□ -0.41
USP39-206ENST00000448971 COMMD3-BMI1R4GMX3 469 aa12.48□□□□□ -0.41
USP39-206ENST00000448971 FAM183AA6NL82 134 aa12.47□□□□□ -0.41
USP39-206ENST00000448971 MT-ND5P03915 603 aa12.47□□□□□ -0.41
USP39-206ENST00000448971 SPARCP09486 303 aa12.47□□□□□ -0.41
USP39-206ENST00000448971 CLUP10909 449 aa12.47□□□□□ -0.41
USP39-206ENST00000448971 ZNF250P15622 560 aa12.47□□□□□ -0.41
USP39-206ENST00000448971 RPS27P42677 84 aaKnown RBP12.47□□□□□ -0.41
USP39-206ENST00000448971 SLC25A1P53007 311 aa12.47□□□□□ -0.41
USP39-206ENST00000448971 GINS1Q14691 196 aa12.47□□□□□ -0.41
USP39-206ENST00000448971 KPNB1Q14974 876 aaKnown RBP12.47□□□□□ -0.41
USP39-206ENST00000448971 C6orf52Q5T4I8 152 aa12.47□□□□□ -0.41
USP39-206ENST00000448971 SLC18B1Q6NT16 456 aa12.47□□□□□ -0.41
USP39-206ENST00000448971 LYPD4Q6UWN0 246 aa12.47□□□□□ -0.41
USP39-206ENST00000448971 CFAP77Q6ZQR2 320 aa12.47□□□□□ -0.41
USP39-206ENST00000448971 AMIGO2Q86SJ2 522 aa12.47□□□□□ -0.41
USP39-206ENST00000448971 ZDHHC13Q8IUH4 622 aa12.47□□□□□ -0.41
USP39-206ENST00000448971 C1orf174Q8IYL3 243 aa12.47□□□□□ -0.41
USP39-206ENST00000448971 NEU4Q8WWR8 484 aaPredicted RBP12.47□□□□□ -0.41
USP39-206ENST00000448971 PYDC1Q8WXC3 89 aa12.47□□□□□ -0.41
USP39-206ENST00000448971 LRTOMTQ8WZ04 291 aa12.47□□□□□ -0.41
USP39-206ENST00000448971 DUS3LQ96G46 650 aaKnown RBP12.47□□□□□ -0.41
USP39-206ENST00000448971 PITX2Q99697 317 aa12.47□□□□□ -0.41
USP39-206ENST00000448971 COQ7Q99807 217 aa12.47□□□□□ -0.41
USP39-206ENST00000448971 PIMREGQ9BSJ6 248 aa12.47□□□□□ -0.41
USP39-206ENST00000448971 OR2J1Q9GZK6 312 aa12.47□□□□□ -0.41
USP39-206ENST00000448971 SEMA6AQ9H2E6 1030 aa12.47□□□□□ -0.41
USP39-206ENST00000448971 KRT84Q9NSB2 600 aa12.47□□□□□ -0.41
USP39-206ENST00000448971 MRPL22Q9NWU5 206 aaKnown RBP12.47□□□□□ -0.41
USP39-206ENST00000448971 IGLV3-9A0A075B6K5 115 aa12.46□□□□□ -0.41
USP39-206ENST00000448971 PRR23D1E9PI22 279 aaPredicted RBP12.46□□□□□ -0.41
USP39-206ENST00000448971 G3V2T6 193 aa12.46□□□□□ -0.41
USP39-206ENST00000448971 ICMTO60725 284 aa12.46□□□□□ -0.41
USP39-206ENST00000448971 NGFP01138 241 aa12.46□□□□□ -0.41
USP39-206ENST00000448971 DBHP09172 617 aa12.46□□□□□ -0.41
USP39-206ENST00000448971 PRR23D2P0DMB1 279 aaPredicted RBP12.46□□□□□ -0.41
USP39-206ENST00000448971 NAT2P11245 290 aa12.46□□□□□ -0.41
USP39-206ENST00000448971 SLC25A16P16260 332 aa12.46□□□□□ -0.41
USP39-206ENST00000448971 FMO3P31513 532 aa12.46□□□□□ -0.41
USP39-206ENST00000448971 MPV17P39210 176 aa12.46□□□□□ -0.41
USP39-206ENST00000448971 ACTR3P61158 418 aa12.46□□□□□ -0.41
USP39-206ENST00000448971 ZNF362Q5T0B9 420 aaPredicted RBP12.46□□□□□ -0.41
USP39-206ENST00000448971 FAHD1Q6P587 224 aa12.46□□□□□ -0.41
USP39-206ENST00000448971 ZNRF4Q8WWF5 429 aa12.46□□□□□ -0.41
USP39-206ENST00000448971 DDOQ99489 341 aa12.46□□□□□ -0.41
USP39-206ENST00000448971 ATF6BQ99941 703 aa12.46□□□□□ -0.41
USP39-206ENST00000448971 PRRG3Q9BZD7 231 aa12.46□□□□□ -0.41
USP39-206ENST00000448971 NMNAT2Q9BZQ4 307 aa12.46□□□□□ -0.41
USP39-206ENST00000448971 MED20Q9H944 212 aa12.46□□□□□ -0.41
USP39-206ENST00000448971 CDC42EP3Q9UKI2 254 aa12.46□□□□□ -0.41
USP39-206ENST00000448971 PLSCR5A0PG75 271 aa12.45□□□□□ -0.42
USP39-206ENST00000448971 H3BSA7 217 aa12.45□□□□□ -0.42
USP39-206ENST00000448971 SURF4O15260 269 aa12.45□□□□□ -0.42
USP39-206ENST00000448971 HMGN1P05114 100 aa12.45□□□□□ -0.42
USP39-206ENST00000448971 DAOP14920 347 aa12.45□□□□□ -0.42
USP39-206ENST00000448971 GGT2P36268 569 aa12.45□□□□□ -0.42
USP39-206ENST00000448971 RGS6P49758 472 aa12.45□□□□□ -0.42
USP39-206ENST00000448971 ENTPD1P49961 510 aa12.45□□□□□ -0.42
USP39-206ENST00000448971 DAPP51397 102 aa12.45□□□□□ -0.42
USP39-206ENST00000448971 BLVRAP53004 296 aa12.45□□□□□ -0.42
USP39-206ENST00000448971 RPS7P62081 194 aaKnown RBP12.45□□□□□ -0.42
USP39-206ENST00000448971 HIST1H3AP68431 136 aa12.45□□□□□ -0.42
USP39-206ENST00000448971 MOGQ16653 247 aa12.45□□□□□ -0.42
USP39-206ENST00000448971 TMEM249Q2WGJ8 235 aa12.45□□□□□ -0.42
USP39-206ENST00000448971 KRTAP24-1Q3LI83 254 aa12.45□□□□□ -0.42
USP39-206ENST00000448971 HIST2H3PS2Q5TEC6 136 aa12.45□□□□□ -0.42
USP39-206ENST00000448971 MBNL2Q5VZF2 373 aaKnown RBP12.45□□□□□ -0.42
USP39-206ENST00000448971 TMEM236Q5W0B7 351 aa12.45□□□□□ -0.42
USP39-206ENST00000448971 ACSM5Q6NUN0 579 aa12.45□□□□□ -0.42
USP39-206ENST00000448971 PLBD1Q6P4A8 553 aa12.45□□□□□ -0.42
USP39-206ENST00000448971 HIST2H3AQ71DI3 136 aa12.45□□□□□ -0.42
USP39-206ENST00000448971 PARP8Q8N3A8 854 aa12.45□□□□□ -0.42
USP39-206ENST00000448971 ZNF511Q8NB15 262 aa12.45□□□□□ -0.42
USP39-206ENST00000448971 OR6N2Q8NGY6 317 aa12.45□□□□□ -0.42
USP39-206ENST00000448971 KLF14Q8TD94 323 aaPredicted RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms