RNA–Protein interactions for RNA: ENST00000447784.1

LINC00408-201, long intergenic non-protein coding RNA 408, humanhuman

TSL 5 BASIC

Gene LINC00408, Length 560 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00408-201ENST00000447784 MED21Q13503 144 aa10.05□□□□□ -0.8
LINC00408-201ENST00000447784 SMN1Q16637 294 aaKnown RBP10.05□□□□□ -0.8
LINC00408-201ENST00000447784 CCDC92Q53HC0 331 aaPredicted RBP10.05□□□□□ -0.8
LINC00408-201ENST00000447784 HIST2H3PS2Q5TEC6 136 aa10.05□□□□□ -0.8
LINC00408-201ENST00000447784 SPNS3Q6ZMD2 512 aa10.05□□□□□ -0.8
LINC00408-201ENST00000447784 HIST2H3AQ71DI3 136 aa10.05□□□□□ -0.8
LINC00408-201ENST00000447784 SPATC1Q76KD6 591 aa10.05□□□□□ -0.8
LINC00408-201ENST00000447784 KRT77Q7Z794 578 aa10.05□□□□□ -0.8
LINC00408-201ENST00000447784 CPEB3Q8NE35 698 aaKnown RBP10.05□□□□□ -0.8
LINC00408-201ENST00000447784 SMAP2Q8WU79 429 aaPredicted RBP10.05□□□□□ -0.8
LINC00408-201ENST00000447784 NRGNQ92686 78 aa10.05□□□□□ -0.8
LINC00408-201ENST00000447784 LGALS12Q96DT0 336 aa10.05□□□□□ -0.8
LINC00408-201ENST00000447784 MAP6Q96JE9 813 aa10.05□□□□□ -0.8
LINC00408-201ENST00000447784 COQ7Q99807 217 aa10.05□□□□□ -0.8
LINC00408-201ENST00000447784 MROQ9BYG7 248 aa10.05□□□□□ -0.8
LINC00408-201ENST00000447784 PLEKHF2Q9H8W4 249 aa10.05□□□□□ -0.8
LINC00408-201ENST00000447784 CHCHD3Q9NX63 227 aaKnown RBP10.05□□□□□ -0.8
LINC00408-201ENST00000447784 ATPIF1Q9UII2 106 aa10.05□□□□□ -0.8
LINC00408-201ENST00000447784 IKZF2Q9UKS7 526 aa10.05□□□□□ -0.8
LINC00408-201ENST00000447784 ATP23Q9Y6H3 246 aa10.05□□□□□ -0.8
LINC00408-201ENST00000447784 CSMD2Q7Z408 3487 aa10.05□□□□□ -0.8
LINC00408-201ENST00000447784 DEFB108AA8MXU0 73 aa10.04□□□□□ -0.8
LINC00408-201ENST00000447784 F5H5K5 113 aa10.04□□□□□ -0.8
LINC00408-201ENST00000447784 DENRO43583 198 aaKnown RBP10.04□□□□□ -0.8
LINC00408-201ENST00000447784 SYNGR3O43761 229 aa10.04□□□□□ -0.8
LINC00408-201ENST00000447784 CCL2P13500 99 aa10.04□□□□□ -0.8
LINC00408-201ENST00000447784 ALOX5APP20292 161 aa10.04□□□□□ -0.8
LINC00408-201ENST00000447784 RAD52P43351 418 aa10.04□□□□□ -0.8
LINC00408-201ENST00000447784 TPTEP56180 551 aa10.04□□□□□ -0.8
LINC00408-201ENST00000447784 GRB2P62993 217 aaKnown RBP10.04□□□□□ -0.8
LINC00408-201ENST00000447784 C6orf141Q5SZD1 244 aa10.04□□□□□ -0.8
LINC00408-201ENST00000447784 ZNF322Q6U7Q0 402 aaPredicted RBP10.04□□□□□ -0.8
LINC00408-201ENST00000447784 SEZ6L2Q6UXD5 910 aa10.04□□□□□ -0.8
LINC00408-201ENST00000447784 PAMR1Q6UXH9 720 aa10.04□□□□□ -0.8
LINC00408-201ENST00000447784 RHOUQ7L0Q8 258 aa10.04□□□□□ -0.8
LINC00408-201ENST00000447784 ZNF584Q8IVC4 421 aa10.04□□□□□ -0.8
LINC00408-201ENST00000447784 ZNF786Q8N393 782 aa10.04□□□□□ -0.8
LINC00408-201ENST00000447784 ACBD7Q8N6N7 88 aa10.04□□□□□ -0.8
LINC00408-201ENST00000447784 OR4F15Q8NGB8 312 aa10.04□□□□□ -0.8
LINC00408-201ENST00000447784 ST7LQ8TDW4 575 aa10.04□□□□□ -0.8
LINC00408-201ENST00000447784 FBLIM1Q8WUP2 373 aa10.04□□□□□ -0.8
LINC00408-201ENST00000447784 SNX33Q8WV41 574 aa10.04□□□□□ -0.8
LINC00408-201ENST00000447784 MBD6Q96DN6 1003 aa10.04□□□□□ -0.8
LINC00408-201ENST00000447784 POM121L2Q96KW2 1035 aa10.04□□□□□ -0.8
LINC00408-201ENST00000447784 DCLRE1CQ96SD1 692 aaKnown RBP10.04□□□□□ -0.8
LINC00408-201ENST00000447784 TBX5Q99593 518 aa10.04□□□□□ -0.8
LINC00408-201ENST00000447784 FOXC2Q99958 501 aa10.04□□□□□ -0.8
LINC00408-201ENST00000447784 LIME1Q9H400 295 aa10.04□□□□□ -0.8
LINC00408-201ENST00000447784 SP140LQ9H930 580 aa10.04□□□□□ -0.8
LINC00408-201ENST00000447784 TPRKBQ9Y3C4 175 aa10.04□□□□□ -0.8
LINC00408-201ENST00000447784 GRIP1Q9Y3R0 1128 aa10.04□□□□□ -0.8
LINC00408-201ENST00000447784 OTOGQ6ZRI0 2925 aa10.03□□□□□ -0.8
LINC00408-201ENST00000447784 IGHV2OR16-5A0A0B4J2B6 119 aa10.03□□□□□ -0.8
LINC00408-201ENST00000447784 A0A1W2PQL4 384 aaPredicted RBP10.03□□□□□ -0.8
LINC00408-201ENST00000447784 ATP6V1G2-DDX39BF2Z307 99 aa10.03□□□□□ -0.8
LINC00408-201ENST00000447784 SIAH2O43255 324 aa10.03□□□□□ -0.8
LINC00408-201ENST00000447784 ZNF254O75437 659 aa10.03□□□□□ -0.8
LINC00408-201ENST00000447784 ABHD16AO95870 558 aa10.03□□□□□ -0.8
LINC00408-201ENST00000447784 KRT8P05787 483 aa10.03□□□□□ -0.8
LINC00408-201ENST00000447784 MYL12AP19105 171 aa10.03□□□□□ -0.8
LINC00408-201ENST00000447784 DNASE1P24855 282 aa10.03□□□□□ -0.8
LINC00408-201ENST00000447784 SLC6A9P48067 706 aa10.03□□□□□ -0.8
LINC00408-201ENST00000447784 RGS6P49758 472 aa10.03□□□□□ -0.8
LINC00408-201ENST00000447784 CXCR4P61073 352 aa10.03□□□□□ -0.8
LINC00408-201ENST00000447784 EGR3Q06889 387 aa10.03□□□□□ -0.8
LINC00408-201ENST00000447784 ADAM5Q6NVV9 412 aa10.03□□□□□ -0.8
LINC00408-201ENST00000447784 DEGS2Q6QHC5 323 aa10.03□□□□□ -0.8
LINC00408-201ENST00000447784 ZNF704Q6ZNC4 412 aaPredicted RBP10.03□□□□□ -0.8
LINC00408-201ENST00000447784 PLEKHG7Q6ZR37 379 aa10.03□□□□□ -0.8
LINC00408-201ENST00000447784 FAM220AQ7Z4H9 259 aa10.03□□□□□ -0.8
LINC00408-201ENST00000447784 STX19Q8N4C7 294 aa10.03□□□□□ -0.8
LINC00408-201ENST00000447784 ZNF283Q8N7M2 679 aa10.03□□□□□ -0.8
LINC00408-201ENST00000447784 ZNF540Q8NDQ6 660 aa10.03□□□□□ -0.8
LINC00408-201ENST00000447784 RNF133Q8WVZ7 376 aa10.03□□□□□ -0.8
LINC00408-201ENST00000447784 MYDGFQ969H8 173 aa10.03□□□□□ -0.8
LINC00408-201ENST00000447784 TMEM80Q96HE8 168 aa10.03□□□□□ -0.8
LINC00408-201ENST00000447784 C4orf45Q96LM5 186 aa10.03□□□□□ -0.8
LINC00408-201ENST00000447784 ZNF75AQ96N20 296 aa10.03□□□□□ -0.8
LINC00408-201ENST00000447784 KCNJ15Q99712 375 aa10.03□□□□□ -0.8
LINC00408-201ENST00000447784 CXXC4Q9H2H0 198 aa10.03□□□□□ -0.8
LINC00408-201ENST00000447784 NIPAL2Q9H841 368 aa10.03□□□□□ -0.8
LINC00408-201ENST00000447784 ELOVL3Q9HB03 270 aa10.03□□□□□ -0.8
LINC00408-201ENST00000447784 INPP5EQ9NRR6 644 aa10.03□□□□□ -0.8
LINC00408-201ENST00000447784 PLCXD1Q9NUJ7 323 aa10.03□□□□□ -0.8
LINC00408-201ENST00000447784 DDX28Q9NUL7 540 aaKnown RBP10.03□□□□□ -0.8
LINC00408-201ENST00000447784 MRPS18AQ9NVS2 196 aaKnown RBP10.03□□□□□ -0.8
LINC00408-201ENST00000447784 CNOT2Q9NZN8 540 aaKnown RBP10.03□□□□□ -0.8
LINC00408-201ENST00000447784 BLOC1S6Q9UL45 172 aa10.03□□□□□ -0.8
LINC00408-201ENST00000447784 EXOGQ9Y2C4 368 aaKnown RBP10.03□□□□□ -0.8
LINC00408-201ENST00000447784 CSMD1Q96PZ7 3565 aa10.03□□□□□ -0.8
LINC00408-201ENST00000447784 ANKHD1Q8IWZ3 2542 aaKnown RBP10.02□□□□□ -0.8
LINC00408-201ENST00000447784 TACC2O95359 2948 aa10.02□□□□□ -0.81
LINC00408-201ENST00000447784 CREBBPQ92793 2442 aa10.02□□□□□ -0.81
LINC00408-201ENST00000447784 LOC100509620A0A075B734 347 aa10.02□□□□□ -0.81
LINC00408-201ENST00000447784 A0A1W2PPR1 153 aa10.02□□□□□ -0.81
LINC00408-201ENST00000447784 PTGES3LE9PB15 166 aa10.02□□□□□ -0.81
LINC00408-201ENST00000447784 XPNPEP2O43895 674 aa10.02□□□□□ -0.81
LINC00408-201ENST00000447784 RAF1P04049 648 aa10.02□□□□□ -0.81
LINC00408-201ENST00000447784 LCKP06239 509 aa10.02□□□□□ -0.81
LINC00408-201ENST00000447784 TACSTD2P09758 323 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms