RNA–Protein interactions for RNA: ENST00000441756.1

MCF2L-217, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 370 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-217ENST00000441756 ELOVL5Q9NYP7 299 aa13.91□□□□□ -0.18
MCF2L-217ENST00000441756 COQ3Q9NZJ6 369 aa13.91□□□□□ -0.18
MCF2L-217ENST00000441756 ST6GALNAC2Q9UJ37 374 aa13.91□□□□□ -0.18
MCF2L-217ENST00000441756 GTF2A1LQ9UNN4 478 aa13.91□□□□□ -0.18
MCF2L-217ENST00000441756 SLC5A6Q9Y289 635 aa13.91□□□□□ -0.18
MCF2L-217ENST00000441756 AMDHD2Q9Y303 409 aa13.91□□□□□ -0.18
MCF2L-217ENST00000441756 PNMA8CA0A1B0GUJ8 204 aa13.9□□□□□ -0.18
MCF2L-217ENST00000441756 IQCMA0A1B0GVH7 501 aa13.9□□□□□ -0.18
MCF2L-217ENST00000441756 A8MXE2 369 aa13.9□□□□□ -0.18
MCF2L-217ENST00000441756 E9PI62 339 aa13.9□□□□□ -0.18
MCF2L-217ENST00000441756 WNT11O96014 354 aa13.9□□□□□ -0.18
MCF2L-217ENST00000441756 SERPINA3P01011 423 aa13.9□□□□□ -0.18
MCF2L-217ENST00000441756 HLA-DPB1P04440 258 aa13.9□□□□□ -0.18
MCF2L-217ENST00000441756 MMP7P09237 267 aaPredicted RBP13.9□□□□□ -0.18
MCF2L-217ENST00000441756 PSMB1P20618 241 aaKnown RBP13.9□□□□□ -0.18
MCF2L-217ENST00000441756 GALP22466 123 aa13.9□□□□□ -0.18
MCF2L-217ENST00000441756 PSMB10P40306 273 aa13.9□□□□□ -0.18
MCF2L-217ENST00000441756 MMP16P51512 607 aa13.9□□□□□ -0.18
MCF2L-217ENST00000441756 GTF2A1P52655 376 aaPredicted RBP13.9□□□□□ -0.18
MCF2L-217ENST00000441756 TPTEP56180 551 aa13.9□□□□□ -0.18
MCF2L-217ENST00000441756 PSG4Q00888 419 aa13.9□□□□□ -0.18
MCF2L-217ENST00000441756 SSX1Q16384 188 aa13.9□□□□□ -0.18
MCF2L-217ENST00000441756 SLC25A35Q3KQZ1 300 aa13.9□□□□□ -0.18
MCF2L-217ENST00000441756 HIKESHIQ53FT3 197 aa13.9□□□□□ -0.18
MCF2L-217ENST00000441756 PABPC1L2AQ5JQF8 200 aa13.9□□□□□ -0.18
MCF2L-217ENST00000441756 BCL2L15Q5TBC7 163 aa13.9□□□□□ -0.18
MCF2L-217ENST00000441756 GDPGP1Q6ZNW5 385 aa13.9□□□□□ -0.18
MCF2L-217ENST00000441756 SSX8Q7RTT4 187 aa13.9□□□□□ -0.18
MCF2L-217ENST00000441756 LUZP2Q86TE4 346 aa13.9□□□□□ -0.18
MCF2L-217ENST00000441756 ZNF283Q8N7M2 679 aa13.9□□□□□ -0.18
MCF2L-217ENST00000441756 ZFP41Q8N8Y5 198 aa13.9□□□□□ -0.18
MCF2L-217ENST00000441756 STEAP2Q8NFT2 490 aa13.9□□□□□ -0.18
MCF2L-217ENST00000441756 OR2G2Q8NGZ5 317 aa13.9□□□□□ -0.18
MCF2L-217ENST00000441756 RPS4Y2Q8TD47 263 aa13.9□□□□□ -0.18
MCF2L-217ENST00000441756 THRSPQ92748 146 aa13.9□□□□□ -0.18
MCF2L-217ENST00000441756 LRRC46Q96FV0 321 aa13.9□□□□□ -0.18
MCF2L-217ENST00000441756 RBM38Q9H0Z9 239 aaKnown RBP13.9□□□□□ -0.18
MCF2L-217ENST00000441756 WNT5BQ9H1J7 359 aa13.9□□□□□ -0.18
MCF2L-217ENST00000441756 SLC17A5Q9NRA2 495 aa13.9□□□□□ -0.18
MCF2L-217ENST00000441756 RSL24D1Q9UHA3 163 aaKnown RBP13.9□□□□□ -0.18
MCF2L-217ENST00000441756 ENPP5Q9UJA9 477 aa13.9□□□□□ -0.18
MCF2L-217ENST00000441756 STUB1Q9UNE7 303 aa13.9□□□□□ -0.18
MCF2L-217ENST00000441756 SSR3Q9UNL2 185 aa13.9□□□□□ -0.18
MCF2L-217ENST00000441756 GRIP1Q9Y3R0 1128 aa13.9□□□□□ -0.18
MCF2L-217ENST00000441756 SHANK1Q9Y566 2161 aa13.9□□□□□ -0.18
MCF2L-217ENST00000441756 TMEM269A0A1B0GVZ9 245 aa13.89□□□□□ -0.19
MCF2L-217ENST00000441756 SYNGR3O43761 229 aa13.89□□□□□ -0.19
MCF2L-217ENST00000441756 AIREO43918 545 aa13.89□□□□□ -0.19
MCF2L-217ENST00000441756 GABARAPO95166 117 aa13.89□□□□□ -0.19
MCF2L-217ENST00000441756 HLA-HP01893 362 aa13.89□□□□□ -0.19
MCF2L-217ENST00000441756 CHRNB4P30926 498 aa13.89□□□□□ -0.19
MCF2L-217ENST00000441756 CX3CR1P49238 355 aa13.89□□□□□ -0.19
MCF2L-217ENST00000441756 RAB1AP62820 205 aa13.89□□□□□ -0.19
MCF2L-217ENST00000441756 SLC3A1Q07837 685 aa13.89□□□□□ -0.19
MCF2L-217ENST00000441756 MRPL49Q13405 166 aaKnown RBP13.89□□□□□ -0.19
MCF2L-217ENST00000441756 ZNF774Q6NX45 483 aa13.89□□□□□ -0.19
MCF2L-217ENST00000441756 ZNF704Q6ZNC4 412 aaPredicted RBP13.89□□□□□ -0.19
MCF2L-217ENST00000441756 CATSPERDQ86XM0 798 aa13.89□□□□□ -0.19
MCF2L-217ENST00000441756 ZNF676Q8N7Q3 588 aa13.89□□□□□ -0.19
MCF2L-217ENST00000441756 OR5AK2Q8NH90 309 aa13.89□□□□□ -0.19
MCF2L-217ENST00000441756 DGCR14Q96DF8 476 aaKnown RBP13.89□□□□□ -0.19
MCF2L-217ENST00000441756 C4orf45Q96LM5 186 aa13.89□□□□□ -0.19
MCF2L-217ENST00000441756 DOK1Q99704 481 aa13.89□□□□□ -0.19
MCF2L-217ENST00000441756 ZNF224Q9NZL3 707 aa13.89□□□□□ -0.19
MCF2L-217ENST00000441756 CEPT1Q9Y6K0 416 aa13.89□□□□□ -0.19
MCF2L-217ENST00000441756 USP24Q9UPU5 2620 aa13.88□□□□□ -0.19
MCF2L-217ENST00000441756 DSPP15924 2871 aaKnown RBP13.88□□□□□ -0.19
MCF2L-217ENST00000441756 OR5H1A6NKK0 313 aa13.88□□□□□ -0.19
MCF2L-217ENST00000441756 H3BSA7 217 aa13.88□□□□□ -0.19
MCF2L-217ENST00000441756 M0R135 149 aa13.88□□□□□ -0.19
MCF2L-217ENST00000441756 RGS9O75916 674 aaPredicted RBP13.88□□□□□ -0.19
MCF2L-217ENST00000441756 UBCP0CG48 685 aaKnown RBP13.88□□□□□ -0.19
MCF2L-217ENST00000441756 GADD45AP24522 165 aa13.88□□□□□ -0.19
MCF2L-217ENST00000441756 OTX1P32242 354 aaPredicted RBP13.88□□□□□ -0.19
MCF2L-217ENST00000441756 APLNRP35414 380 aa13.88□□□□□ -0.19
MCF2L-217ENST00000441756 ASCL1P50553 236 aa13.88□□□□□ -0.19
MCF2L-217ENST00000441756 TLE1Q04724 770 aa13.88□□□□□ -0.19
MCF2L-217ENST00000441756 DOC2BQ14184 412 aa13.88□□□□□ -0.19
MCF2L-217ENST00000441756 ZNF474Q6S9Z5 364 aaPredicted RBP13.88□□□□□ -0.19
MCF2L-217ENST00000441756 DRAM2Q6UX65 266 aa13.88□□□□□ -0.19
MCF2L-217ENST00000441756 PAMR1Q6UXH9 720 aa13.88□□□□□ -0.19
MCF2L-217ENST00000441756 AKR7LQ8NHP1 331 aa13.88□□□□□ -0.19
MCF2L-217ENST00000441756 ISOC1Q96CN7 298 aa13.88□□□□□ -0.19
MCF2L-217ENST00000441756 ZNF799Q96GE5 643 aa13.88□□□□□ -0.19
MCF2L-217ENST00000441756 DCLRE1CQ96SD1 692 aaKnown RBP13.88□□□□□ -0.19
MCF2L-217ENST00000441756 TMED9Q9BVK6 235 aa13.88□□□□□ -0.19
MCF2L-217ENST00000441756 OR10A4Q9H209 315 aa13.88□□□□□ -0.19
MCF2L-217ENST00000441756 FAM206AQ9NX38 181 aa13.88□□□□□ -0.19
MCF2L-217ENST00000441756 JKAMPQ9P055 326 aa13.88□□□□□ -0.19
MCF2L-217ENST00000441756 NUFIP1Q9UHK0 495 aaKnown RBP13.88□□□□□ -0.19
MCF2L-217ENST00000441756 OR52A1Q9UKL2 312 aa13.88□□□□□ -0.19
MCF2L-217ENST00000441756 ZNF281Q9Y2X9 895 aa13.88□□□□□ -0.19
MCF2L-217ENST00000441756 ZGRF1Q86YA3 2104 aa13.88□□□□□ -0.19
MCF2L-217ENST00000441756 ATMQ13315 3056 aa13.88□□□□□ -0.19
MCF2L-217ENST00000441756 KMT2BQ9UMN6 2715 aaPredicted RBP13.88□□□□□ -0.19
MCF2L-217ENST00000441756 B8ZZF3 427 aa13.87□□□□□ -0.19
MCF2L-217ENST00000441756 SRSF10O75494 262 aaKnown RBP13.87□□□□□ -0.19
MCF2L-217ENST00000441756 ANXA2P07355 339 aaKnown RBP13.87□□□□□ -0.19
MCF2L-217ENST00000441756 PATE4P0C8F1 98 aa13.87□□□□□ -0.19
MCF2L-217ENST00000441756 CRYGSP22914 178 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms